Identification of QTLs linked with watermelon fruit and seed traits using GBS-based high-resolution genetic mapping

Mapping of genetic loci controlling fruit linked morphological traits of melon using developed CAPS markers

(2022) Sikandar Amanullah et al.   MOLECULAR BIOLOGY REPORTS

Genetic Mapping and QTL Analysis of Stigma Color in Melon (Cucumis melo L.)

(2022) Yuanzuo Lv et al.   Frontiers in Plant Science

Fine Mapping of Cla015407 Controlling Plant Height in Watermelon

(2021) Taifeng Zhang et al.   JOURNAL OF THE AMERICAN SOCIETY FOR HORTICULTURAL SCIENCE

Candidate gene analysis of watermelon stripe pattern locus ClSP ongoing recombination suppression

(2021) Zhen Yue et al.   THEORETICAL AND APPLIED GENETICS

Genetic Resources and Vulnerabilities of Major Cucurbit Crops

(2021) Rebecca Grumet et al.   Genes

Fine mapping a ClGS gene controlling dark-green stripe rind in watermelon

(2021) Dengke Wang et al.   SCIENTIA HORTICULTURAE

Markers for selection of three alleles of ClSUN25-26-27a (Cla011257) associated with fruit shape in watermelon

(2020) Reeve Legendre et al.   MOLECULAR BREEDING

Comparative Transcriptome Analysis Provides Insights Into Yellow Rind Formation and Preliminary Mapping of the Clyr (Yellow Rind) Gene in Watermelon

(2020) Dongming Liu et al.   Frontiers in Plant Science

Quantitative Trait Loci for Seed Size Variation in Cucurbits – A Review

(2020) Yu Guo et al.   Frontiers in Plant Science

Detection of putative QTL regions associated with ovary traits in melon using SNP-CAPS markers

(2020) Sikandar Amanullah et al.   SCIENTIA HORTICULTURAE

Genetic linkage mapping and QTLs identification for morphology and fruit quality related traits of melon by SNP based CAPS markers

(2020) Sikandar Amanullah et al.   SCIENTIA HORTICULTURAE

Genome of ‘Charleston Gray’, the principal American watermelon cultivar, and genetic characterization of 1,365 accessions in the U.S. National Plant Germplasm System watermelon collection

(2019) Shan Wu et al.   PLANT BIOTECHNOLOGY JOURNAL

Genetic mapping and development of molecular markers for a candidate gene locus controlling rind color in watermelon

(2019) Bingbing Li et al.   THEORETICAL AND APPLIED GENETICS

Genetic analysis of fruit quality traits in prebred lines of watermelon derived from a wild accession of Citrullus amarus

(2019) Siddharood Maragal et al.   EUPHYTICA

Genetic architecture of fruit size and shape variation in cucurbits: a comparative perspective

(2019) Yupeng Pan et al.   THEORETICAL AND APPLIED GENETICS

Fine Mapping of Lycopene Content and Flesh Color Related Gene and Development of Molecular Marker–Assisted Selection for Flesh Color in Watermelon (Citrullus lanatus)

(2019) Chaonan Wang et al.   Frontiers in Plant Science

Construction of a genetic map for Citrullus lanatus based on CAPS markers and mapping of three qualitative traits

(2018) Zhipeng Zhang et al.   SCIENTIA HORTICULTURAE

QTL mapping for melon ( Cucumis melo L.) fruit traits by assembling and utilization of novel SNPs based CAPS markers

(2018) Sikandar Amanullah et al.   SCIENTIA HORTICULTURAE

Genetic mapping reveals a candidate gene (ClFS1) for fruit shape in watermelon (Citrullus lanatus L.)

(2018) Junling Dou et al.   THEORETICAL AND APPLIED GENETICS

Genetic mapping reveals a marker for yellow skin in watermelon (Citrullus lanatus L.)

(2018) Junling Dou et al.   PLoS One

QTL mapping of melon fruit quality traits using a high-density GBS-based genetic map

(2018) L. Pereira et al.   BMC PLANT BIOLOGY

Construction of A High-Density Genetic Map and Mapping of Fruit Traits in Watermelon (Citrullus Lanatus L.) Based on Whole-Genome Resequencing

(2018) Bingbing Li et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Fine mapping and discovery of candidate genes for seed size in watermelon by genome survey sequencing

(2018) Na Li et al.   Scientific Reports

Genetic mapping of a major codominant QTL associated with β-carotene accumulation in watermelon

(2017) Sandra Branham et al.   MOLECULAR BREEDING

A Tonoplast Sugar Transporter Underlies a Sugar Accumulation QTL in Watermelon

(2017) Yi Ren et al.   PLANT PHYSIOLOGY

QTL mapping of domestication and diversifying selection related traits in round-fruited semi-wild Xishuangbanna cucumber (Cucumis sativus L. var. xishuangbannanesis)

(2017) Yupeng Pan et al.   THEORETICAL AND APPLIED GENETICS

Genome wide characterization of simple sequence repeats in watermelon genome and their application in comparative mapping and genetic diversity analysis

(2016) Huayu Zhu et al.   BMC GENOMICS

Construction of a high-density genetic map for watermelon (Citrullus lanatus L.) based on large-scale SNP discovery by specific length amplified fragment sequencing (SLAF-seq)

(2016) Jianli Shang et al.   SCIENTIA HORTICULTURAE

QTL mapping of parthenocarpic fruit set in North American processing cucumber

(2016) Calvin D. Lietzow et al.   THEORETICAL AND APPLIED GENETICS

The chlorophyll-deficient golden leaf mutation in cucumber is due to a single nucleotide substitution in CsChlI for magnesium chelatase I subunit

(2016) Meiling Gao et al.   THEORETICAL AND APPLIED GENETICS

Molecular Dissection of Seedling Salinity Tolerance in Rice (Oryza sativa L.) Using a High-Density GBS-Based SNP Linkage Map

(2016) Teresa B. De Leon et al.   Rice

Rapid and practical molecular marker development for rind traits in watermelon

(2016) Sung-woo Park et al.   Horticulture Environment and Biotechnology

A high density GBS map of bread wheat and its application for dissecting complex disease resistance traits

(2015) Huihui Li et al.   BMC GENOMICS

High-density interspecific genetic maps of kiwifruit and the identification of sex-specific markers

(2015) Qiong Zhang et al.   DNA RESEARCH

Changes in carotenoid profiles and in the expression pattern of the genes in carotenoid metabolisms during fruit development and ripening in four watermelon cultivars

(2015) Pin Lv et al.   FOOD CHEMISTRY

Microsatellite markers linked to the locus of the watermelon fruit stripe pattern

(2015) R.N.C.S. Gama et al.   GENETICS AND MOLECULAR RESEARCH

Construction of a high-density DArTseq SNP-based genetic map and identification of genomic regions with segregation distortion in a genetic population derived from a cross between feral and cultivated-type watermelon

(2015) Runsheng Ren et al.   MOLECULAR GENETICS AND GENOMICS

QTL mapping in multiple populations and development stages reveals dynamic quantitative trait loci for fruit size in cucumbers of different market classes

(2015) Yiqun Weng et al.   THEORETICAL AND APPLIED GENETICS

Sequence-characterized amplified polymorphism markers for selecting rind stripe pattern in watermelon (Citrullus lanatus L.)

(2015) Hyeogjun Kim et al.   Horticulture Environment and Biotechnology

An ultra-high density bin-map for rapid QTL mapping for tassel and ear architecture in a large F2 maize population

(2014) Zongliang Chen et al.   BMC GENOMICS

An integrated genetic map based on four mapping populations and quantitative trait loci associated with economically important traits in watermelon (Citrullus lanatus)

(2014) Yi Ren et al.   BMC PLANT BIOLOGY

Mapping of quantitative trait loci for lycopene content and fruit traits in Citrullus lanatus

(2014) Shi Liu et al.   EUPHYTICA

Use of VeraCode 384-plex assays for watermelon diversity analysis and integrated genetic map of watermelon with single nucleotide polymorphisms and simple sequence repeats

(2014) Padma Nimmakayala et al.   MOLECULAR BREEDING

Watermelon origin solved with molecular phylogenetics including Linnaean material: another example of museomics

(2014) Guillaume Chomicki et al.   NEW PHYTOLOGIST

High-Resolution Genetic Map for Understanding the Effect of Genome-Wide Recombination Rate on Nucleotide Diversity in Watermelon

(2014) Umesh K. Reddy et al.   G3-Genes Genomes Genetics

Comparative genomics reveals candidate carotenoid pathway regulators of ripening watermelon fruit

(2013) Stefania Grassi et al.   BMC GENOMICS

VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing

(2012) D. C. Koboldt et al.   GENOME RESEARCH

Carotenoid Accumulation and Carotenogenic Gene Expression during Fruit Development in Novel Interspecific Inbred Squash Lines and Their Parents

(2012) Korakot Nakkanong et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions

(2012) Shaogui Guo et al.   NATURE GENETICS

Development of High-Density Genetic Maps for Barley and Wheat Using a Novel Two-Enzyme Genotyping-by-Sequencing Approach

(2012) Jesse A. Poland et al.   PLoS One

A High Resolution Genetic Map Anchoring Scaffolds of the Sequenced Watermelon Genome

(2012) Yi Ren et al.   PLoS One

Comparative mapping in watermelon [Citrullus lanatus (Thunb.) Matsum. et Nakai]

(2012) Katherine Sandlin et al.   THEORETICAL AND APPLIED GENETICS

Discovery of Second Gene for Solid Dark Green versus Light Green Rind Pattern in Watermelon

(2011) R. Kumar et al.   JOURNAL OF HEREDITY

A framework for variation discovery and genotyping using next-generation DNA sequencing data

(2011) Mark A DePristo et al.   NATURE GENETICS

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

R/qtl: high-throughput multiple QTL mapping: Fig. 1.

(2010) Danny Arends et al.   BIOINFORMATICS

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

(2010) K. Wang et al.   NUCLEIC ACIDS RESEARCH

Expression of carotenogenic genes during the development and ripening of watermelon fruit

(2010) Baoshan Kang et al.   SCIENTIA HORTICULTURAE

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS