Image Harvest: an open-source platform for high-throughput plant image processing and analysis

Novel imaging-based phenotyping strategies for dissecting crosstalk in plant development

(2015) Simon Fraas et al.   JOURNAL OF EXPERIMENTAL BOTANY

The FLOWERING LOCUS T/TERMINAL FLOWER 1 Gene Family: Functional Evolution and Molecular Mechanisms

(2015) Daniel P. Wickland et al.   Molecular Plant

A Versatile Phenotyping System and Analytics Platform Reveals Diverse Temporal Responses to Water Availability in Setaria

(2015) Noah Fahlgren et al.   Molecular Plant

HyperART: non-invasive quantification of leaf traits using hyperspectral absorption-reflectance-transmittance imaging

(2015) Sergej Bergsträsser et al.   Plant Methods

Integrating Image-Based Phenomics and Association Analysis to Dissect the Genetic Architecture of Temporal Salinity Responses in Rice

(2015) Malachy T. Campbell et al.   PLANT PHYSIOLOGY

Predicting Neuroinflammation in Morphine Tolerance for Tolerance Therapy from Immunostaining Images of Rat Spinal Cord

(2015) Shinn-Long Lin et al.   PLoS One

TraitCapture: genomic and environment modelling of plant phenomic data

(2014) Tim B Brown et al.   CURRENT OPINION IN PLANT BIOLOGY

GrainScan: a low cost, fast method for grain size and colour measurements

(2014) Alex P Whan et al.   Plant Methods

Integrated Analysis Platform: An Open-Source Information System for High-Throughput Plant Phenotyping

(2014) C. Klukas et al.   PLANT PHYSIOLOGY

Chemical and Genetic Validation of the Statin Drug Target to Treat the Helminth Disease, Schistosomiasis

(2014) Liliana Rojo-Arreola et al.   PLoS One

Plant phenomics and high-throughput phenotyping: accelerating rice functional genomics using multidisciplinary technologies

(2013) Wanneng Yang et al.   CURRENT OPINION IN PLANT BIOLOGY

Bridging the genotype-phenotype gap: what does it take?

(2013) Arne B. Gjuvsland et al.   JOURNAL OF PHYSIOLOGY-LONDON

Registration of the Rice Diversity Panel 1 for Genomewide Association Studies

(2013) Georgia C. Eizenga et al.   Journal of Plant Registrations

RootNav: Navigating Images of Complex Root Architectures

(2013) M. P. Pound et al.   PLANT PHYSIOLOGY

GiA Roots: software for the high throughput analysis of plant root system architecture

(2012) Taras Galkovskyi et al.   BMC PLANT BIOLOGY

Improving MRI segmentation with probabilistic GHSOM and multiobjective optimization

(2012) Andrés Ortiz et al.   NEUROCOMPUTING

SmartGrain: High-Throughput Phenotyping Software for Measuring Seed Shape through Image Analysis

(2012) T. Tanabata et al.   PLANT PHYSIOLOGY

Phenomics – technologies to relieve the phenotyping bottleneck

(2011) Robert T. Furbank et al.   TRENDS IN PLANT SCIENCE

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

(2011) Keyan Zhao et al.   Nature Communications

Genetic Architecture of Aluminum Tolerance in Rice (Oryza sativa) Determined through Genome-Wide Association Analysis and QTL Mapping

(2011) Adam N. Famoso et al.   PLoS Genetics

High-throughput phenotyping of multicellular organisms: finding the link between genotype and phenotype

(2011) Rosangela Sozzani et al.   GENOME BIOLOGY

Bisque: a platform for bioimage analysis and management

(2009) Kristian Kvilekval et al.   BIOINFORMATICS

High throughput phenotyping of root growth dynamics, lateral root formation, root architecture and root hair development enabled by PlaRoM

(2009) Nima Yazdanbakhsh et al.   FUNCTIONAL PLANT BIOLOGY

Progress in ideotype breeding to increase rice yield potential

(2008) Shaobing Peng et al.   FIELD CROPS RESEARCH

Efficient Control of Population Structure in Model Organism Association Mapping

(2008) H. M. Kang et al.   GENETICS