Lilac (Syringa oblata) genome provides insights into its evolution and molecular mechanism of petal color change

Intraspecific relationships between floral signals and rewards with implications for plant fitness

(2021) Carla J Essenberg   AoB Plants

De novo assembly of a new Olea europaea genome accession using nanopore sequencing

(2021) Guodong Rao et al.   Horticulture Research

Whole-genome resequencing of Osmanthus fragrans provides insights into flower color evolution

(2021) Hongguo Chen et al.   Horticulture Research

BUSCO Update: Novel and Streamlined Workflows along with Broader and Deeper Phylogenetic Coverage for Scoring of Eukaryotic, Prokaryotic, and Viral Genomes

(2021) Mosè Manni et al.   MOLECULAR BIOLOGY AND EVOLUTION

Haplotype-resolved genome assembly and allele-specific gene expression in cultivated ginger

(2021) Shi-Ping Cheng et al.   Horticulture Research

An R2R3-MYB transcription factor CmMYB21 represses anthocyanin biosynthesis in color fading petals of chrysanthemum

(2021) Yiguang Wang et al.   SCIENTIA HORTICULTURAE

Identifying and removing haplotypic duplication in primary genome assemblies

(2020) Dengfeng Guan et al.   BIOINFORMATICS

Analysis of flavonoids and anthocyanin biosynthesis-related genes expression reveals the mechanism of petal color fading of Malus hupehensis (Rosaceae)

(2020) Meiling Han et al.   Brazilian Journal of Botany

The honeysuckle genome provides insight into the molecular mechanism of carotenoid metabolism underlying dynamic flower coloration

(2020) Xiangdong Pu et al.   NEW PHYTOLOGIST

Genome sequencing and population genomics modeling provide insights into the local adaptation of weeping forsythia

(2020) Lin-Feng Li et al.   Horticulture Research

Chromosome-level genome assembly of a parent species of widely cultivated azaleas

(2020) Fu-Sheng Yang et al.   Nature Communications

Comparative transcriptomics method to infer gene coexpression networks and its applications to maize and rice leaf transcriptomes

(2019) Yao-Ming Chang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Computational aspects of Anthocyanidins and Anthocyanins: a review

(2019) Alessandro Sinopoli et al.   FOOD CHEMISTRY

Transcriptome and chemical analysis reveal putative genes involved in flower color change in Paeonia ‘Coral Sunset’

(2019) Liping Guo et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Impact of location, type, and number of glycosidic substitutions on the color expression of o -dihydroxylated anthocyanidins

(2018) Gregory T. Sigurdson et al.   FOOD CHEMISTRY

The chromosome-level quality genome provides insights into the evolution of the biosynthesis genes for aroma compounds of Osmanthus fragrans

(2018) Xiulian Yang et al.   Horticulture Research

Fast and accurate de novo genome assembly from long uncorrected reads

(2017) Robert Vaser et al.   GENOME RESEARCH

Anthocyanin Profiles in Flowers of Grape Hyacinth

(2017) Qian Lou et al.   MOLECULES

The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution

(2017) Hélène Badouin et al.   NATURE

Advances in the MYB–bHLH–WD Repeat (MBW) Pigment Regulatory Model: Addition of a WRKY Factor and Co-option of an Anthocyanin MYB for Betalain Regulation

(2017) Alan Lloyd et al.   PLANT AND CELL PHYSIOLOGY

Map-based cloning of the pear gene MYB114 identifies an interaction with other transcription factors to coordinately regulate fruit anthocyanin biosynthesis

(2017) Gaifang Yao et al.   PLANT JOURNAL

Genome of wild olive and the evolution of oil biosynthesis

(2017) Turgay Unver et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds

(2017) Olga Dudchenko et al.   SCIENCE

iTAK: A Program for Genome-wide Prediction and Classification of Plant Transcription Factors, Transcriptional Regulators, and Protein Kinases

(2016) Yi Zheng et al.   Molecular Plant

Genome sequence and genetic diversity of European ash trees

(2016) Elizabeth S. A. Sollars et al.   NATURE

Juicer Provides a One-Click System for Analyzing Loop-Resolution Hi-C Experiments

(2016) Neva C. Durand et al.   Cell Systems

Transcriptional control of flavonoid biosynthesis by MYB–bHLH–WDR complexes

(2015) Wenjia Xu et al.   TRENDS IN PLANT SCIENCE

Delphinidin-3-O-glucoside and delphinidin-3-O-rutinoside mediate the redox-sensitive caspase 3-related pro-apoptotic effect of blackcurrant juice on leukaemia Jurkat cells

(2015) Antonio J. León-González et al.   Journal of Functional Foods

Transcriptome Analysis of Syringa oblata Lindl. Inflorescence Identifies Genes Associated with Pigment Biosynthesis and Scent Metabolism

(2015) Jian Zheng et al.   PLoS One

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Infernal 1.1: 100-fold faster RNA homology searches

(2013) E. P. Nawrocki et al.   BIOINFORMATICS

Lessons from flower colour evolution on targets of selection

(2012) Carolyn A. Wessinger et al.   JOURNAL OF EXPERIMENTAL BOTANY

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

(2012) Guangchuang Yu et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

A genome triplication associated with early diversification of the core eudicots

(2012) Yuannian Jiao et al.   GENOME BIOLOGY

MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects

(2011) Carson Holt et al.   BMC BIOINFORMATICS

Identification and characterisation of anthocyanins in the antioxidant activity-containing fraction of Liriope platyphylla fruits

(2011) Jin Hwan Lee et al.   FOOD CHEMISTRY

Chemical characterisation of anthocyanins in tamarillo (Solanum betaceum Cav.) and Andes berry (Rubus glaucus Benth.) fruits

(2011) Coralia Osorio et al.   FOOD CHEMISTRY

Novel aspects of the flowers and floral pigmentation of two Cleome species (Cleomaceae), C. hassleriana and C. serrulata

(2010) Constance Nozzolillo et al.   BIOCHEMICAL SYSTEMATICS AND ECOLOGY

Anthocyanins: Natural Colorants with Health-Promoting Properties

(2010) Jian He et al.   Annual Review of Food Science and Technology

Blue flower color development by anthocyanins: from chemical structure to cell physiology

(2009) Kumi Yoshida et al.   NATURAL PRODUCT REPORTS