Hierarchical Accumulation of Histone Variant H2A.Z Regulates Transcriptional States and Histone Modifications in Early Mammalian Embryos

A dual role for H2A.Z.1 in modulating the dynamics of RNA polymerase II initiation and elongation

(2021) Constantine Mylonas et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

INO80 promotes H2A.Z occupancy to regulate cell fate transition in pluripotent stem cells

(2021) Hongyao Yu et al.   NUCLEIC ACIDS RESEARCH

Histone variant H2A.Z regulates zygotic genome activation

(2021) Dafne Ibarra-Morales et al.   Nature Communications

Evolutionary epigenomic analyses in mammalian early embryos reveal species-specific innovations and conserved principles of imprinting

(2021) Xukun Lu et al.   Science Advances

Developmentally Programmed Tankyrase Activity Upregulates β-Catenin and Licenses Progression of Embryonic Genome Activation

(2020) Andrés Gambini et al.   DEVELOPMENTAL CELL

The chromatin remodeler SRCAP promotes self‐renewal of intestinal stem cells

(2020) Buqing Ye et al.   EMBO JOURNAL

Analysis of Genome Architecture during SCNT Reveals a Role of Cohesin in Impeding Minor ZGA

(2020) Ke Zhang et al.   MOLECULAR CELL

Epigenetic priming by Dppa2 and 4 in pluripotency facilitates multi-lineage commitment

(2020) Mélanie A. Eckersley-Maslin et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Maternal Cytokines CXCL12, VEGFA, and WNT5A Promote Porcine Oocyte Maturation via MAPK Activation and Canonical WNT Inhibition

(2020) Xin Liu et al.   Frontiers in Cell and Developmental Biology

Genome-wide chromatin accessibility is restricted by ANP32E

(2020) Kristin E. Murphy et al.   Nature Communications

Maintenance of CTCF- and Transcription Factor-Mediated Interactions from the Gametes to the Early Mouse Embryo

(2019) Yoon Hee Jung et al.   MOLECULAR CELL

Characterization and comparative analyses of transcriptomes of cloned and in vivo fertilized porcine pre-implantation embryos

(2019) Xiaoyan He et al.   Biology Open

Lineage specification and pluripotency revealed by transcriptome analysis from oocyte to blastocyst in pig

(2019) Qingran Kong et al.   FASEB JOURNAL

Placeholder Nucleosomes Underlie Germline-to-Embryo DNA Methylation Reprogramming

(2018) Patrick J. Murphy et al.   CELL

Reprogramming of H3K9me3-dependent heterochromatin during mammalian embryo development

(2018) Chenfei Wang et al.   NATURE CELL BIOLOGY

The interplay between H2A.Z and H3K9 methylation in regulating HP1α binding to linker histone-containing chromatin

(2018) Daniel P Ryan et al.   NUCLEIC ACIDS RESEARCH

Gas41 links histone acetylation to H2A.Z deposition and maintenance of embryonic stem cell identity

(2018) Chih-Chao Hsu et al.   Cell Discovery

Transcriptome analyses of rhesus monkey preimplantation embryos reveal a reduced capacity for DNA double-strand break repair in primate oocytes and early embryos

(2017) Xinyi Wang et al.   GENOME RESEARCH

H2A.Z Represses Gene Expression by Modulating Promoter Nucleosome Structure and Enhancer Histone Modifications in Arabidopsis

(2017) Xiaozhuan Dai et al.   Molecular Plant

Conserved roles of mouse DUX and human DUX4 in activating cleavage-stage genes and MERVL/HERVL retrotransposons

(2017) Peter G Hendrickson et al.   NATURE GENETICS

Variants of core histones and their roles in cell fate decisions, development and cancer

(2017) Marcus Buschbeck et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

KAT-Independent Gene Regulation by Tip60 Promotes ESC Self-Renewal but Not Pluripotency

(2017) Diwash Acharya et al.   Cell Reports

Establishing Chromatin Regulatory Landscape during Mouse Preimplantation Development

(2016) Falong Lu et al.   CELL

Resetting Epigenetic Memory by Reprogramming of Histone Modifications in Mammals

(2016) Hui Zheng et al.   MOLECULAR CELL

Distinct features of H3K4me3 and H3K27me3 chromatin domains in pre-implantation embryos

(2016) Xiaoyu Liu et al.   NATURE

Allelic reprogramming of the histone modification H3K4me3 in early mammalian development

(2016) Bingjie Zhang et al.   NATURE

H2A.Z.1 Monoubiquitylation Antagonizes BRD2 to Maintain Poised Chromatin in ESCs

(2016) Lauren E. Surface et al.   Cell Reports

Identification of key factors conquering developmental arrest of somatic cell cloned embryos by combining embryo biopsy and single-cell sequencing

(2016) Wenqiang Liu et al.   Cell Discovery

DYNAMIC REGULATION OF AP-1 TRANSCRIPTIONAL COMPLEXES DIRECTS TROPHOBLAST DIFFERENTIATION

(2015) Kaiyu Kubota et al.   MOLECULAR AND CELLULAR BIOLOGY

Histone chaperone Anp32e removes H2A.Z from DNA double-strand breaks and promotes nucleosome reorganization and DNA repair

(2015) Ozge Gursoy-Yuzugullu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An ultra-low-input native ChIP-seq protocol for genome-wide profiling of rare cell populations

(2015) Julie Brind’Amour et al.   Nature Communications

Transcriptional profiles of bovine in vivo pre-implantation development

(2014) Zongliang Jiang et al.   BMC GENOMICS

Nucleosomes Are Context-Specific, H2A.Z-Modulated Barriers to RNA Polymerase

(2014) Christopher M. Weber et al.   MOLECULAR CELL

ANP32E is a histone chaperone that removes H2A.Z from chromatin

(2014) Arnaud Obri et al.   NATURE

Full-length RNA-seq from single cells using Smart-seq2

(2014) Simone Picelli et al.   Nature Protocols

DBTMEE: a database of transcriptome in mouse early embryos

(2014) Sung-Joon Park et al.   NUCLEIC ACIDS RESEARCH

Fine mapping of genome activation in bovine embryos by RNA sequencing

(2014) A. Graf et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Single-Cell RNA-Seq Reveals Dynamic, Random Monoallelic Gene Expression in Mammalian Cells

(2014) Q. Deng et al.   SCIENCE

ETS transcription factors in hematopoietic stem cell development

(2013) Aldo Ciau-Uitz et al.   BLOOD CELLS MOLECULES AND DISEASES

Nucleosome-free Region Dominates Histone Acetylation in Targeting SWR1 to Promoters for H2A.Z Replacement

(2013) Anand Ranjan et al.   CELL

Genetic programs in human and mouse early embryos revealed by single-cell RNA sequencing

(2013) Zhigang Xue et al.   NATURE

Single-cell RNA-Seq profiling of human preimplantation embryos and embryonic stem cells

(2013) Liying Yan et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Identification of Transcription Factors for Lineage-Specific ESC Differentiation

(2013) Kohei Yamamizu et al.   Stem Cell Reports

H2A.Z Facilitates Access of Active and Repressive Complexes to Chromatin in Embryonic Stem Cell Self-Renewal and Differentiation

(2012) Gangqing Hu et al.   Cell Stem Cell

Analysis of active chromatin modifications in early mammalian embryos reveals uncoupling of H2A.Z acetylation and H3K36 trimethylation from embryonic genome activation

(2012) Ana Bošković et al.   Epigenetics

Histone H2A.Z Controls a Critical Chromatin Remodeling Step Required for DNA Double-Strand Break Repair

(2012) Ye Xu et al.   MOLECULAR CELL

PGC7 binds histone H3K9me2 to protect against conversion of 5mC to 5hmC in early embryos

(2012) Toshinobu Nakamura et al.   NATURE

H2A.Z landscapes and dual modifications in pluripotent and multipotent stem cells underlie complex genome regulatory functions

(2012) Manching Ku et al.   GENOME BIOLOGY

Global Regulation of H2A.Z Localization by the INO80 Chromatin-Remodeling Enzyme Is Essential for Genome Integrity

(2011) Manolis Papamichos-Chronakis et al.   CELL

Changes in the nuclear deposition of histone H2A variants during pre-implantation development in mice

(2010) B. Nashun et al.   DEVELOPMENT

Generation and Characterization of the Anp32e-Deficient Mouse

(2010) Patrick T. Reilly et al.   PLoS One

The evolutionary differentiation of two histone H2A.Z variants in chordates (H2A.Z-1 and H2A.Z-2) is mediated by a stepwise mutation process that affects three amino acid residues

(2009) José M Eirín-López et al.   BMC EVOLUTIONARY BIOLOGY

The Euchromatic and Heterochromatic Landscapes Are Shaped by Antagonizing Effects of Transcription on H2A.Z Deposition

(2009) Sara Hardy et al.   PLoS Genetics

H2AZ Is Enriched at Polycomb Complex Target Genes in ES Cells and Is Necessary for Lineage Commitment

(2008) Menno P. Creyghton et al.   CELL

Somatic cell nuclear transfer and derivation of embryonic stem cells in the mouse

(2008) S MARKOULAKI et al.   METHODS

Model-based Analysis of ChIP-Seq (MACS)

(2008) Yong Zhang et al.   GENOME BIOLOGY