Deep Insights Into the Plastome Evolution and Phylogenetic Relationships of the Tribe Urticeae (Family Urticaceae)
出版年份 2022 全文链接
标题
Deep Insights Into the Plastome Evolution and Phylogenetic Relationships of the Tribe Urticeae (Family Urticaceae)
作者
关键词
-
出版物
Frontiers in Plant Science
Volume 13, Issue -, Pages -
出版商
Frontiers Media SA
发表日期
2022-05-20
DOI
10.3389/fpls.2022.870949
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Comparative plastid genomics of four Pilea (Urticaceae) species: insight into interspecific plastid genome diversity in Pilea
- (2021) Jingling Li et al. BMC PLANT BIOLOGY
- Comparative Analyses of Euonymus Chloroplast Genomes: Genetic Structure, Screening for Loci With Suitable Polymorphism, Positive Selection Genes, and Phylogenetic Relationships Within Celastrineae
- (2021) Yongtan Li et al. Frontiers in Plant Science
- Chloroplast phylogenomic insights into the evolution of Distylium (Hamamelidaceae)
- (2021) Wenpan Dong et al. BMC GENOMICS
- Comparative analysis of chloroplast genome structure and molecular dating in Myrtales
- (2021) Xiao-Feng Zhang et al. BMC PLANT BIOLOGY
- Plastid phylogenomics of Pleurothallidinae (Orchidaceae): Conservative plastomes, new variable markers, and comparative analyses of plastid, nuclear, and mitochondrial data
- (2021) Anna Victoria Silvério R. Mauad et al. PLoS One
- Phylogenetics and comparative plastome genomics of two of the largest genera of angiosperms, Piper and Peperomia (Piperaceae)
- (2021) Sara E. Simmonds et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Plastome phylogeography in two African rain forest legume trees reveals that Dahomey Gap populations originate from the Cameroon volcanic line
- (2020) Boris B. Demenou et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Plastid phylogenomic data yield new and robust insights into the phylogeny of Cleisostoma–Gastrochilus clades (Orchidaceae, Aeridinae)
- (2020) Ding-Kun Liu et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Himalayan Nettle Girardinia diversifolia as a Candidate Ingredient for Pharmaceutical and Nutraceutical Applications—Phytochemical Analysis and In Vitro Bioassays
- (2020) Shyam Sharan Shrestha et al. MOLECULES
- New Insights Into the Plastome Evolution of the Millettioid/Phaseoloid Clade (Papilionoideae, Leguminosae)
- (2020) Oyetola Oyebanji et al. Frontiers in Plant Science
- Implications of plastome evolution in the true lilies (monocot order Liliales)
- (2020) Hoang Dang Khoa Do et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Nutritional value, antioxidant and antidiabetic properties of nettles (Laportea alatipes and Obetia tenax)
- (2020) Nomfundo Thobeka Mahlangeni et al. Scientific Reports
- Characteristics and Mutational Hotspots of Plastomes in Debregeasia (Urticaceae)
- (2020) Ruo-Nan Wang et al. Frontiers in Genetics
- Comparative chloroplast genome analyses of Avena: insights into evolutionary dynamics and phylogeny
- (2020) Qing Liu et al. BMC PLANT BIOLOGY
- Chloroplot: An Online Program for the Versatile Plotting of Organelle Genomes
- (2020) Shuyu Zheng et al. Frontiers in Genetics
- Plastome evolution and phylogenetic relationships among Malvaceae subfamilies
- (2020) Jian-Hua Wang et al. GENE
- Combination of Sanger and target-enrichment markers supports revised generic delimitation in the problematic ‘Urera clade’ of the nettle family (Urticaceae)
- (2020) Tom Wells et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Unraveling patterns and processes of diversification in the South Andean-Patagonian Nassauvia subgenus Strongyloma (Asteraceae, Nassauvieae)
- (2019) Marcela V. Nicola et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Complete chloroplast genome sequence of Elatostema dissectum (Urticaceae)
- (2019) Long-Fei Fu et al. Mitochondrial DNA Part B-Resources
- Plastid phylogenomic insights into the evolution of Caryophyllales
- (2019) Gang Yao et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes
- (2019) Xiao-Jian Qu et al. Plant Methods
- Phylogenomic conflict resulting from ancient introgression following species diversification in Stewartia s.l. (Theaceae)
- (2019) Han-Yang Lin et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Complete Chloroplast Genome Sequence and Phylogenetic Analysis of Quercus bawanglingensis Huang, Li et Xing, a Vulnerable Oak Tree in China
- (2019) Xue Liu et al. Forests
- Comparative analysis of the complete chloroplast genome among Prunus mume, P. armeniaca, and P. salicina
- (2019) Song Xue et al. Horticulture Research
- Tropical Asian Origin, boreotropical migration and long-distance dispersal in Nettles (Urticeae, Urticaceae)
- (2019) Xianhan Huang et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Nanocnide zhejiangensis sp. nov. (Urticaceae: Urticeae) from Zhejiang Province, East China
- (2019) Jin Xiao‐Feng et al. NORDIC JOURNAL OF BOTANY
- Gastroprotective activity of hydroalcoholic extract of the leaves of Urera baccifera in rodents
- (2019) Régis Carlos Benvenutti et al. JOURNAL OF ETHNOPHARMACOLOGY
- Plastid phylogenomic insights into the evolution of the Caprifoliaceae s.l. (Dipsacales)
- (2019) Hong-Xin Wang et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Plastid phylogenomics resolves infrafamilial relationships of the Styracaceae and sheds light on the backbone relationships of the Ericales
- (2018) Minghui Yan et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7
- (2018) Andrew Rambaut et al. SYSTEMATIC BIOLOGY
- Testing Darwin's transoceanic dispersal hypothesis for the inland nettle family (Urticaceae)
- (2018) Zeng-Yuan Wu et al. ECOLOGY LETTERS
- DnaSP 6: DNA Sequence Polymorphism Analysis of Large Data Sets
- (2017) Julio Rozas et al. MOLECULAR BIOLOGY AND EVOLUTION
- Pulling the sting out of nettle systematics – A comprehensive phylogeny of the genus Urtica L. (Urticaceae)
- (2016) Bernadette Grosse-Veldmann et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Comparative Analysis of the Complete Chloroplast Genomes of Five Quercus Species
- (2016) Yanci Yang et al. Frontiers in Plant Science
- The Complete Plastid Genome of Lagerstroemia fauriei and Loss of rpl2 Intron from Lagerstroemia (Lythraceae)
- (2016) Cuihua Gu et al. PLoS One
- Bandage: interactive visualization ofde novogenome assemblies: Fig. 1.
- (2015) Ryan R. Wick et al. BIOINFORMATICS
- The potential of stinging nettle (Urtica dioica L.) as a crop with multiple uses
- (2015) Nicola Di Virgilio et al. INDUSTRIAL CROPS AND PRODUCTS
- Evolutionary dynamics of the plastid inverted repeat: the effects of expansion, contraction, and loss on substitution rates
- (2015) Andan Zhu et al. NEW PHYTOLOGIST
- A Comparative Analysis of Whole Plastid Genomes from the Apiales: Expansion and Contraction of the Inverted Repeat, Mitochondrial to Plastid Transfer of DNA, and Identification of Highly Divergent Noncoding Regions
- (2015) Stephen R. Downie et al. SYSTEMATIC BOTANY
- Generic phylogeny and character evolution in Urticeae (Urticaceae) inferred from nuclear and plastid DNA regions
- (2015) Changkyun Kim et al. TAXON
- Species delimitation and relationships: The dance of the seven veils
- (2015) Yamama Naciri et al. TAXON
- Plastid genome sequences of legumes reveal parallel inversions and multiple losses ofrps16in papilionoids
- (2015) Erika N. Schwarz et al. Journal of Systematics and Evolution
- Mimosoid legume plastome evolution: IR expansion, tandem repeat expansions, and accelerated rate of evolution in clpP
- (2015) Diana V. Dugas et al. Scientific Reports
- ycf1, the most promising plastid DNA barcode of land plants
- (2015) Wenpan Dong et al. Scientific Reports
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- Thirteen Camellia chloroplast genome sequences determined by high-throughput sequencing: genome structure and phylogenetic relationships
- (2014) Hui Huang et al. BMC EVOLUTIONARY BIOLOGY
- Causes, consequences and solutions of phylogenetic incongruence
- (2014) A. Som BRIEFINGS IN BIOINFORMATICS
- The complete chloroplast genome sequence of Mahonia bealei (Berberidaceae) reveals a significant expansion of the inverted repeat and phylogenetic relationship with other angiosperms
- (2013) Ji Ma et al. GENE
- Molecular phylogeny of the nettle family (Urticaceae) inferred from multiple loci of three genomes and extensive generic sampling
- (2013) Zeng-Yuan Wu et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- A recurring syndrome of accelerated plastid genome evolution in the angiosperm tribe Sileneae (Caryophyllaceae)
- (2013) Daniel B. Sloan et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Polymorphic chloroplast microsatellite loci in Nelumbo (Nelumbonaceae)
- (2012) J. Xue et al. AMERICAN JOURNAL OF BOTANY
- Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
- (2012) M. Kearse et al. BIOINFORMATICS
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
- (2012) Anton Bankevich et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- jModelTest 2: more models, new heuristics and parallel computing
- (2012) Diego Darriba et al. NATURE METHODS
- MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
- (2012) Fredrik Ronquist et al. SYSTEMATIC BIOLOGY
- Therapeutic effects of total coumarins from Urtica dentata Hand on collagen-induced arthritis in Balb/c mice
- (2011) Xiang Luo et al. JOURNAL OF ETHNOPHARMACOLOGY
- The evolution of the plastid chromosome in land plants: gene content, gene order, gene function
- (2011) Susann Wicke et al. PLANT MOLECULAR BIOLOGY
- Clusters of Nucleotide Substitutions and Insertion/Deletion Mutations Are Associated with Repeat Sequences
- (2011) Michael J. McDonald et al. PLOS BIOLOGY
- Implications of the Plastid Genome Sequence of Typha (Typhaceae, Poales) for Understanding Genome Evolution in Poaceae
- (2010) Mary M. Guisinger et al. JOURNAL OF MOLECULAR EVOLUTION
- progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement
- (2010) Aaron E. Darling et al. PLoS One
- Nomenclature of tribes within the Urticaceae
- (2010) Barry J. Conn et al. KEW BULLETIN
- Gene tree discordance, phylogenetic inference and the multispecies coalescent
- (2009) James H. Degnan et al. TRENDS IN ECOLOGY & EVOLUTION
- Infra-familial phylogeny of Urticaceae, using chloroplast sequence data
- (2008) Julisasi T. Hadiah et al. AUSTRALIAN SYSTEMATIC BOTANY
- Extensive Rearrangements in the Chloroplast Genome of Trachelium caeruleum Are Associated with Repeats and tRNA Genes
- (2008) Rosemarie C. Haberle et al. JOURNAL OF MOLECULAR EVOLUTION
- Complete plastid genome sequence of the chickpea (Cicer arietinum) and the phylogenetic distribution of rps12 and clpP intron losses among legumes (Leguminosae)
- (2008) Robert K. Jansen et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Study of the tensile properties of stinging nettle fibres (Urtica dioica)
- (2007) Edwin Bodros et al. MATERIALS LETTERS
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started