Constructing the boundary between potent and ineffective siRNAs by MG-algorithm with C-features

Plant 22-nt siRNAs mediate translational repression and stress adaptation

(2020) Huihui Wu et al.   NATURE

How plants silence stress

(2020) Kim Baumann   NATURE REVIEWS MOLECULAR CELL BIOLOGY

SiRNA silencing efficacy prediction based on a deep architecture

(2018) Ye Han et al.   BMC GENOMICS

Analyzing the similarity of samples and genes by MG-PCC algorithm, t-SNE-SS and t-SNE-SG maps

(2018) Xingang Jia et al.   BMC BIOINFORMATICS

Multiple-cumulative probabilities used to cluster and visualize transcriptomes

(2017) Xingang Jia et al.   FEBS Open Bio

Predicting siRNA efficacy based on multiple selective siRNA representations and their combination at score level

(2017) Fei He et al.   Scientific Reports

The effect of regions flanking target site on siRNA potency

(2013) Li Liu et al.   GENOMICS

VIRsiRNApred: a web server for predicting inhibition efficacy of siRNAs targeting human viruses

(2013) Abid Qureshi et al.   Journal of Translational Medicine

MysiRNA: Improving siRNA efficacy prediction using a machine-learning model combining multi-tools and whole stacking energy (ΔG)

(2012) Mohamed Mysara et al.   JOURNAL OF BIOMEDICAL INFORMATICS

Application of RNA interference in treating human diseases

(2011) S. Abdolhamid Angaji et al.   JOURNAL OF GENETICS

Current prospects for RNA interference-based therapies

(2011) Beverly L. Davidson et al.   NATURE REVIEWS GENETICS

An intuitive graphical visualization technique for the interrogation of transcriptome data

(2011) Natascha Bushati et al.   NUCLEIC ACIDS RESEARCH

siPRED: Predicting siRNA Efficacy Using Various Characteristic Methods

(2011) Wei-Jie Pan et al.   PLoS One

Rates of evolutionary change in viruses: patterns and determinants

(2008) Siobain Duffy et al.   NATURE REVIEWS GENETICS