The Tudor Domain-Containing Protein, Kotsubu (CG9925), Localizes to the Nuage and Functions in piRNA Biogenesis in D. melanogaster

Molecular principles of Piwi-mediated cotranscriptional silencing through the dimeric SFiNX complex

(2021) Jakob Schnabl et al.   GENES & DEVELOPMENT

piRNA-mediated gene regulation and adaptation to sex-specific transposon expression in D. melanogaster male germline

(2021) Peiwei Chen et al.   GENES & DEVELOPMENT

DMA-tudor interaction modules control the specificity of in vivo condensates

(2021) Edward M. Courchaine et al.   CELL

pyGenomeTracks: reproducible plots for multivariate genomic data sets

(2020) Lucille Lopez-Delisle et al.   BIOINFORMATICS

FlyBase: updates to the Drosophila melanogaster knowledge base

(2020) Aoife Larkin et al.   NUCLEIC ACIDS RESEARCH

piRNA silencing contributes to interspecies hybrid sterility and reproductive isolation in Drosophila melanogaster

(2019) Alexei A Kotov et al.   NUCLEIC ACIDS RESEARCH

piRNA-guided co-transcriptional silencing coopts nuclear export factors

(2019) Martin H Fabry et al.   eLife

Transposable elements in human genetic disease

(2019) Lindsay M. Payer et al.   NATURE REVIEWS GENETICS

OUP accepted manuscript

(2018)   BIOINFORMATICS

Dual-layer transposon repression in heads of Drosophila melanogaster

(2018) Marius van den Beek et al.   RNA

RNA helicase Spn-E is required to maintain Aub and AGO3 protein levels for piRNA silencing in the germline of Drosophila

(2016) Sergei S. Ryazansky et al.   EUROPEAN JOURNAL OF CELL BIOLOGY

Piwi Modulates Chromatin Accessibility by Regulating Multiple Factors Including Histone H1 to Repress Transposons

(2016) Yuka W. Iwasaki et al.   MOLECULAR CELL

The piRNA pathway is developmentally regulated during spermatogenesis inDrosophila

(2016) Emilie Quénerch'du et al.   RNA

Krimper Enforces an Antisense Bias on piRNA Pools by Binding AGO3 in the Drosophila Germline

(2015) Kaoru Sato et al.   MOLECULAR CELL

A comprehensive analysis of piRNAs from adult human testis and their relationship with genes and mobile elements

(2014) Hongseok Ha et al.   BMC GENOMICS

Impact of nuclear Piwi elimination on chromatin state in Drosophila melanogaster ovaries

(2014) Mikhail S. Klenov et al.   NUCLEIC ACIDS RESEARCH

PIWI proteins and their interactors in piRNA biogenesis, germline development and gene expression

(2014) Hsueh-Yen Ku et al.   National Science Review

Function of Piwi, a nuclear Piwi/Argonaute protein, is independent of its slicer activity

(2013) Nicole Darricarrère et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Active Transposition in Genomes

(2012) Cheng Ran Lisa Huang et al.   Annual Review of Genetics

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

The tudor domain protein Kumo is required to assemble the nuage and to generate germline piRNAs inDrosophila

(2011) Amit Anand et al.   EMBO JOURNAL

A systematic analysis ofDrosophilaTUDOR domain-containing proteins identifies Vreteno and the Tdrd12 family as essential primary piRNA pathway factors

(2011) Dominik Handler et al.   EMBO JOURNAL

Tdrd1 acts as a molecular scaffold for Piwi proteins and piRNA targets in zebrafish

(2011) Hsin-Yi Huang et al.   EMBO JOURNAL

A novel organelle, the piNG-body, in the nuage of Drosophila male germ cells is associated with piRNA-mediated gene silencing

(2011) Mikhail V. Kibanov et al.   MOLECULAR BIOLOGY OF THE CELL

Heterotypic piRNA Ping-Pong Requires Qin, a Protein with Both E3 Ligase and Tudor Domains

(2011) Zhao Zhang et al.   MOLECULAR CELL

Deciphering arginine methylation: Tudor tells the tale

(2011) Chen Chen et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Gender-Specific Hierarchy in Nuage Localization of PIWI-Interacting RNA Factors in Drosophila

(2011) Akihiro Nagao et al.   Frontiers in Genetics

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Tudor Domain

(2010) Paul Lasko   CURRENT BIOLOGY

Repression of Retroelements in Drosophila Germline via piRNA Pathway by the Tudor Domain Protein Tejas

(2010) Veena S. Patil et al.   CURRENT BIOLOGY

Structural basis for methylarginine-dependent recognition of Aubergine by Tudor

(2010) H. Liu et al.   GENES & DEVELOPMENT

Structural basis for recognition of arginine methylated Piwi proteins by the extended Tudor domain

(2010) K. Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Biogenesis pathways of piRNAs loaded onto AGO3 in the Drosophila testis

(2010) A. Nagao et al.   RNA

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Specialized piRNA Pathways Act in Germline and Somatic Tissues of the Drosophila Ovary

(2009) Colin D. Malone et al.   CELL

Collapse of Germline piRNAs in the Absence of Argonaute3 Reveals Somatic piRNAs in Flies

(2009) Chengjian Li et al.   CELL

Functional involvement of Tudor and dPRMT5 in the piRNA processing pathway in Drosophila germlines

(2009) Kazumichi M Nishida et al.   EMBO JOURNAL

Proteomic analysis of murine Piwi proteins reveals a role for arginine methylation in specifying interaction with Tudor family members

(2009) V. V. Vagin et al.   GENES & DEVELOPMENT

piRNAs mediate posttranscriptional retroelement silencing and localization to pi-bodies in theDrosophilagermline

(2009) Ai Khim Lim et al.   JOURNAL OF CELL BIOLOGY

Structure and Ligand Binding of the Extended Tudor Domain of D. melanogaster Tudor-SN

(2009) Anders Friberg et al.   JOURNAL OF MOLECULAR BIOLOGY

Systematic Functional Analysis of Bicaudal-D Serine Phosphorylation and Intragenic Suppression of a Female Sterile Allele of BicD

(2009) Rafael Koch et al.   PLoS One

Arginine methylation of Aubergine mediates Tudor binding and germ plasm localization

(2009) Y. Kirino et al.   RNA

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Endogenous RNA Interference Provides a Somatic Defense against Drosophila Transposons

(2008) Wei-Jen Chung et al.   CURRENT BIOLOGY

An endogenous small interfering RNA pathway in Drosophila

(2008) Benjamin Czech et al.   NATURE

Endogenous siRNAs Derived from Transposons and mRNAs in Drosophila Somatic Cells

(2008) M. Ghildiyal et al.   SCIENCE