Fusarium fruiting body microbiome member Pantoea agglomerans inhibits fungal pathogenesis by targeting lipid rafts

High-throughput cultivation and identification of bacteria from the plant root microbiota

(2021) Jingying Zhang et al.   Nature Protocols

Fruitbody chemistry underlies the structure of endofungal bacterial communities across fungal guilds and phylogenetic groups

(2020) Mari Pent et al.   ISME Journal

A plant genetic network for preventing dysbiosis in the phyllosphere

(2020) Tao Chen et al.   NATURE

A lipophilic cation protects crops against fungal pathogens by multiple modes of action

(2020) Gero Steinberg et al.   Nature Communications

A practical guide to amplicon and metagenomic analysis of microbiome data

(2020) Yong-Xin Liu et al.   Protein & Cell

Discovery of a Cryptic Depsipeptide from Streptomyces ghanaensis via MALDI-MS-Guided High-Throughput Elicitor Screening

(2020) Chen Zhang et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Infection cushions of Fusarium graminearum are fungal arsenals for wheat infection

(2020) Michael Mentges et al.   MOLECULAR PLANT PATHOLOGY

Plant–microbiome interactions: from community assembly to plant health

(2020) Pankaj Trivedi et al.   NATURE REVIEWS MICROBIOLOGY

Soil origin and plant genotype structure distinct microbiome compartments in the model legume Medicago truncatula

(2020) Shawn P. Brown et al.   Microbiome

A phosphorylated transcription factor regulates sterol biosynthesis in Fusarium graminearum

(2019) Zunyong Liu et al.   Nature Communications

Fusarium graminearum Trichothecene Mycotoxins: Biosynthesis, Regulation, and Management

(2019) Yun Chen et al.   Annual Review of Phytopathology

Ecology and Evolution of Plant Microbiomes

(2019) Viviane Cordovez et al.   Annual Review of Microbiology

NRT1.1B is associated with root microbiota composition and nitrogen use in field-grown rice

(2019) Jingying Zhang et al.   NATURE BIOTECHNOLOGY

Microbe-driven chemical ecology: past, present and future

(2019) Ruth Schmidt et al.   ISME Journal

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Microbiome-driven identification of microbial indicators for postharvest diseases of sugar beets

(2019) Peter Kusstatscher et al.   Microbiome

Initial soil microbiome composition and functioning predetermine future plant health

(2019) Zhong Wei et al.   Science Advances

C16-Fengycin A affect the growth of Candida albicans by destroying its cell wall and accumulating reactive oxygen species

(2019) Yanan Liu et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome

(2019) Víctor J. Carrión et al.   SCIENCE

Selectivity and Mechanism of Fengycin, an Antimicrobial Lipopeptide, from Molecular Dynamics

(2018) Sreyoshi Sur et al.   JOURNAL OF PHYSICAL CHEMISTRY B

The fungal myosin I is essential for Fusarium toxisome formation

(2018) Guangfei Tang et al.   PLoS Pathogens

Structure and function of the global topsoil microbiome

(2018) Mohammad Bahram et al.   NATURE

Wheat microbiome bacteria can reduce virulence of a plant pathogenic fungus by altering histone acetylation

(2018) Yun Chen et al.   Nature Communications

Microbial Interkingdom Interactions in Roots Promote Arabidopsis Survival

(2018) Paloma Durán et al.   CELL

Pseudomonas aeruginosa quorum-sensing metabolite induces host immune cell death through cell surface lipid domain dissolution

(2018) Dingka Song et al.   Nature Microbiology

Fungus-associated bacteriome in charge of their host behavior

(2017) Kristin Schulz-Bohm et al.   FUNGAL GENETICS AND BIOLOGY

Antifungal peptides: To be or not to be membrane active

(2016) Marina Rautenbach et al.   BIOCHIMIE

Diversity is the question, not the answer

(2016) Ashley Shade   ISME Journal

Microbes Drive Evolution of Animals and Plants: the Hologenome Concept

(2016) Eugene Rosenberg et al.   mBio

Host genotype and age shape the leaf and root microbiomes of a wild perennial plant

(2016) Maggie R. Wagner et al.   Nature Communications

Synthetic microbial communities

(2014) Tobias Großkopf et al.   CURRENT OPINION IN MICROBIOLOGY

Dynamics in microbial communities: unraveling mechanisms to identify principles

(2014) Allan Konopka et al.   ISME Journal

Potential of Pseudomonas chlororaphis subsp. aurantiaca Strain Pcho10 as a Biocontrol Agent Against Fusarium graminearum

(2014) Weiqun Hu et al.   PHYTOPATHOLOGY

The Fusarium graminearum Genome Reveals More Secondary Metabolite Gene Clusters and Hints of Horizontal Gene Transfer

(2014) Christian M. K. Sieber et al.   PLoS One

Antifungal activity of the lipopeptides produced by Bacillus amyloliquefaciens anti-CA against Candida albicans isolated from clinic

(2013) Bo Song et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Fluorescent Probes for Lipid Rafts: From Model Membranes to Living Cells

(2013) Andrey S. Klymchenko et al.   CHEMISTRY & BIOLOGY

Temporal variability in soil microbial communities across land-use types

(2013) Christian L Lauber et al.   ISME Journal

Patterns and Processes of Microbial Community Assembly

(2013) D. R. Nemergut et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Ribosomal Database Project: data and tools for high throughput rRNA analysis

(2013) James R. Cole et al.   NUCLEIC ACIDS RESEARCH

Quantitative divergence of the bacterial root microbiota in Arabidopsis thaliana relatives

(2013) K. Schlaeppi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The role of flotillin FloA and stomatin StoA in the maintenance of apical sterol-rich membrane domains and polarity in the filamentous fungus Aspergillus nidulans

(2012) Norio Takeshita et al.   MOLECULAR MICROBIOLOGY

Involvement ofFgERG4in ergosterol biosynthesis, vegetative differentiation and virulence inFusarium graminearum

(2012) Xin Liu et al.   MOLECULAR PLANT PATHOLOGY

The Top 10 fungal pathogens in molecular plant pathology

(2012) RALPH DEAN et al.   MOLECULAR PLANT PATHOLOGY

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Structure, function and diversity of the healthy human microbiome

(2012)   NATURE

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Conversion of the Amazon rainforest to agriculture results in biotic homogenization of soil bacterial communities

(2012) J. L. M. Rodrigues et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Impact of biotic and a-biotic parameters on structure and function of microbial communities living on sclerotia of the soil-borne pathogenic fungus Rhizoctonia solani

(2011) Christin Zachow et al.   APPLIED SOIL ECOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Antifungal activity and mechanism of fengycin in the presence and absence of commercial surfactin against Rhizopus stolonifer

(2011) Yang Tao et al.   JOURNAL OF MICROBIOLOGY

Bacterial-Fungal Interactions: Hyphens between Agricultural, Clinical, Environmental, and Food Microbiologists

(2011) P. Frey-Klett et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Bayesian community-wide culture-independent microbial source tracking

(2011) Dan Knights et al.   NATURE METHODS

Unravelling the effects of the environment and host genotype on the gut microbiome

(2011) Aymé Spor et al.   NATURE REVIEWS MICROBIOLOGY

Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria

(2011) R. Mendes et al.   SCIENCE

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Interspecies Chemical Communication in Bacterial Development

(2009) Paul D. Straight et al.   Annual Review of Microbiology

Plant–microbe interactions promoting plant growth and health: perspectives for controlled use of microorganisms in agriculture

(2009) Gabriele Berg   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Systems level analysis of two-component signal transduction systems in Erwinia amylovora: Role in virulence, regulation of amylovoran biosynthesis and swarming motility

(2009) Youfu Zhao et al.   BMC GENOMICS

For Blighted Waves of Grain: Fusarium graminearum in the Postgenomics Era

(2009) F. Trail   PLANT PHYSIOLOGY

Giant unilamellar vesicle formation under physiologically relevant conditions

(2008) Tanja Pott et al.   CHEMISTRY AND PHYSICS OF LIPIDS