Metagenomic evidence for the microbial transformation of carboxyl-rich alicyclic molecules: A long-term macrocosm experiment
出版年份 2022 全文链接
标题
Metagenomic evidence for the microbial transformation of carboxyl-rich alicyclic molecules: A long-term macrocosm experiment
作者
关键词
Aquatron tower tank, Refractory dissolved organic matter (RDOM), Microbial metagenome, KEGG modules, CRAM production, FTICR MS
出版物
WATER RESEARCH
Volume 216, Issue -, Pages 118281
出版商
Elsevier BV
发表日期
2022-03-15
DOI
10.1016/j.watres.2022.118281
参考文献
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- Microbial transformation of distinct exogenous substrates into analogous composition of recalcitrant dissolved organic matter
- (2021) Jie Lian et al. ENVIRONMENTAL MICROBIOLOGY
- Correspondence between DOM molecules and microbial community in a subtropical coastal estuary on a spatiotemporal scale
- (2021) Qi Chen et al. ENVIRONMENT INTERNATIONAL
- Harnessing solar energy using phototrophic microorganisms: A sustainable pathway to bioenergy, biomaterials, and environmental solutions
- (2021) Rahamat Ullah Tanvir et al. RENEWABLE & SUSTAINABLE ENERGY REVIEWS
- Lepidopteran mevalonate pathway optimization in Escherichia coli efficiently produces isoprenol analogs for next-generation biofuels
- (2021) Bo Pang et al. METABOLIC ENGINEERING
- Different carboxyl‐rich alicyclic molecules proxy compounds select distinct bacterioplankton for oxidation of dissolved organic matter in the mesopelagic Sargasso Sea
- (2020) Shuting Liu et al. LIMNOLOGY AND OCEANOGRAPHY
- Metagenomic and Metaproteomic Insights into Photoautotrophic and Heterotrophic Interactions in a Synechococcus Culture
- (2020) Qiang Zheng et al. mBio
- Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics
- (2020) Shunan Cao et al. Microbiome
- In-House Standard Method for Molecular Characterization of Dissolved Organic Matter by FT-ICR Mass Spectrometry
- (2020) Chen He et al. ACS Omega
- Highly enriched N‐containing organic molecules of Synechococcus lysates and their rapid transformation by heterotrophic bacteria
- (2020) Qiang Zheng et al. LIMNOLOGY AND OCEANOGRAPHY
- Differences in bioavailability of canonical and non-canonical D-amino acids for marine microbes
- (2020) Rui Wang et al. SCIENCE OF THE TOTAL ENVIRONMENT
- DOC dynamics and bacterial community succession during long-term degradation of Ulva prolifera and their implications for the legacy effect of green tides on refractory DOC pool in seawater
- (2020) Jing Chen et al. WATER RESEARCH
- Resource aromaticity affects bacterial community successions in response to different sources of dissolved organic matter
- (2020) Lei Zhou et al. WATER RESEARCH
- Amino acid enantiomers in old and young dissolved organic matter: Implications for a microbial nitrogen pump
- (2019) Taylor A.B. Broek et al. GEOCHIMICA ET COSMOCHIMICA ACTA
- Microbial transformation of virus-induced dissolved organic matter from picocyanobacteria: coupling of bacterial diversity and DOM chemodiversity
- (2019) Zhao Zhao et al. ISME Journal
- Stratification of dissolved organic matter in the upper 2000 m water column at the Mariana Trench
- (2019) Penghui Li et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Molecular properties are a primary control on the microbial utilization of dissolved organic matter in the ocean
- (2019) Yuan Shen et al. LIMNOLOGY AND OCEANOGRAPHY
- Linking metagenomics to aquatic microbial ecology and biogeochemical cycles
- (2019) Hans‐Peter Grossart et al. LIMNOLOGY AND OCEANOGRAPHY
- Pyruvate cycle increases aminoglycoside efficacy and provides respiratory energy in bacteria
- (2018) Yu-bin Su et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Microbial Interactions With Dissolved Organic Matter Drive Carbon Dynamics and Community Succession
- (2018) Xiaoqin Wu et al. Frontiers in Microbiology
- Unveiling the enigma of refractory carbon in the ocean
- (2018) Nianzhi Jiao et al. National Science Review
- Universal molecular structures in natural dissolved organic matter
- (2018) Maren Zark et al. Nature Communications
- The chemodiversity of paddy soil dissolved organic matter correlates with microbial community at continental scales
- (2018) Hong-Yi Li et al. Microbiome
- Biosynthetic studies on terpenoids produced by Streptomyces
- (2017) Tomohisa Kuzuyama JOURNAL OF ANTIBIOTICS
- Salmon provides fast and bias-aware quantification of transcript expression
- (2017) Rob Patro et al. NATURE METHODS
- SAR202 Genomes from the Dark Ocean Predict Pathways for the Oxidation of Recalcitrant Dissolved Organic Matter
- (2017) Zachary Landry et al. mBio
- Picocyanobacteria and deep-ocean fluorescent dissolved organic matter share similar optical properties
- (2017) Zhao Zhao et al. Nature Communications
- Carotenoids are the likely precursor of a significant fraction of marine dissolved organic matter
- (2017) Neal Arakawa et al. Science Advances
- Deciphering associations between dissolved organic molecules and bacterial communities in a pelagic marine system
- (2016) Helena Osterholz et al. ISME Journal
- MEGAHIT v1.0: A fast and scalable metagenome assembler driven by advanced methodologies and community practices
- (2016) Dinghua Li et al. METHODS
- Dissolved organic sulfur in the ocean: Biogeochemistry of a petagram inventory
- (2016) K. B. Ksionzek et al. SCIENCE
- Untangling the role that microbes play in ocean carbon cycle─A new paradigm in marine biogeochemistry
- (2016) ChuanLun Zhang Science China-Earth Sciences
- iGraph: an incremental data processing system for dynamic graph
- (2016) Wuyang Ju et al. Frontiers of Computer Science
- Heterotrimeric NADH-Oxidizing Methylenetetrahydrofolate Reductase from the Acetogenic Bacterium Acetobacterium woodii
- (2015) Johannes Bertsch et al. JOURNAL OF BACTERIOLOGY
- An ultrahigh-resolution mass spectrometry index to estimate natural organic matter lability
- (2015) Juliana D'Andrilli et al. RAPID COMMUNICATIONS IN MASS SPECTROMETRY
- Marine sequestration of carbon in bacterial metabolites
- (2015) Oliver J. Lechtenfeld et al. Nature Communications
- Prokka: rapid prokaryotic genome annotation
- (2014) T. Seemann BIOINFORMATICS
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- Fast and sensitive protein alignment using DIAMOND
- (2014) Benjamin Buchfink et al. NATURE METHODS
- QUAST: quality assessment tool for genome assemblies
- (2013) Alexey Gurevich et al. BIOINFORMATICS
- Molecular composition of dissolved organic matter from a wetland plant (Juncus effusus) after photochemical and microbial decomposition (1.25 yr): Common features with deep sea dissolved organic matter
- (2013) Pamela E. Rossel et al. ORGANIC GEOCHEMISTRY
- Combination of Entner-Doudoroff Pathway with MEP Increases Isoprene Production in Engineered Escherichia coli
- (2013) Huaiwei Liu et al. PLoS One
- CD-HIT: accelerated for clustering the next-generation sequencing data
- (2012) Limin Fu et al. BIOINFORMATICS
- Evaluation method for the potential functionome harbored in the genome and metagenome
- (2012) Hideto Takami et al. BMC GENOMICS
- Oxidized sterols as a significant component of dissolved organic matter: Evidence from 2D HPLC in combination with 2D and 3D NMR spectroscopy
- (2012) Gwen C. Woods et al. WATER RESEARCH
- Squalene-Hopene Cyclases
- (2011) Gabriele Siedenburg et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- A simple and efficient method for the solid-phase extraction of dissolved organic matter (SPE-DOM) from seawater
- (2011) Thorsten Dittmar et al. LIMNOLOGY AND OCEANOGRAPHY-METHODS
- Dissolved Organic Matter in the Ocean: A Controversy Stimulates New Insights
- (2011) Dennis Hansell et al. OCEANOGRAPHY
- A Methylaspartate Cycle in Haloarchaea
- (2011) M. Khomyakova et al. SCIENCE
- Multivariate Statistical Approaches for the Characterization of Dissolved Organic Matter Analyzed by Ultrahigh Resolution Mass Spectrometry
- (2010) Rachel L. Sleighter et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Systems-Level Metabolic Flux Profiling Elucidates a Complete, Bifurcated Tricarboxylic Acid Cycle in Clostridium acetobutylicum
- (2010) D. Amador-Noguez et al. JOURNAL OF BACTERIOLOGY
- Major bacterial contribution to the ocean reservoir of detrital organic carbon and nitrogen
- (2010) Karl Kaiser et al. LIMNOLOGY AND OCEANOGRAPHY
- Characterization of dissolved organic matter across the Subtropical Convergence off the South Island, New Zealand
- (2010) Michael Gonsior et al. MARINE CHEMISTRY
- Unprecedented acetoacetyl-coenzyme A synthesizing enzyme of the thiolase superfamily involved in the mevalonate pathway
- (2010) E. Okamura et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea
- (2010) J. McCarren et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Quantifying environmental adaptation of metabolic pathways in metagenomics
- (2009) T. A. Gianoulis et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Functional metagenomic profiling of nine biomes
- (2008) Elizabeth A. Dinsdale et al. NATURE
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