Sub-3-Å cryo-EM structure of RNA enabled by engineered homomeric self-assembly

Cryo-EM structures of full-length Tetrahymena ribozyme at 3.1 Å resolution

(2021) Zhaoming Su et al.   NATURE

Branched kissing loops for the construction of diverse RNA homooligomeric nanostructures

(2020) Di Liu et al.   Nature Chemistry

Structural Insights into RNA Dimerization: Motifs, Interfaces and Functions

(2020) Charles Bou-Nader et al.   MOLECULES

Accelerated cryo-EM-guided determination of three-dimensional RNA-only structures

(2020) Kalli Kappel et al.   NATURE METHODS

Improvement of cryo-EM maps by density modification

(2020) Thomas C. Terwilliger et al.   NATURE METHODS

Software tools for automated transmission electron microscopy

(2019) Martin Schorb et al.   NATURE METHODS

Structural basis of amino acid surveillance by higher-order tRNA-mRNA interactions

(2019) Shuang Li et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Cryo-EM structure of a 40 kDa SAM-IV riboswitch RNA at 3.7 Å resolution

(2019) Kaiming Zhang et al.   Nature Communications

Principles for targeting RNA with drug-like small molecules

(2018) Katherine Deigan Warner et al.   NATURE REVIEWS DRUG DISCOVERY

Real-space refinement in PHENIX for cryo-EM and crystallography

(2018) Pavel V. Afonine et al.   Acta Crystallographica Section D-Structural Biology

New tools for automated high-resolution cryo-EM structure determination in RELION-3

(2018) Jasenko Zivanov et al.   eLife

MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy

(2017) Shawn Q Zheng et al.   NATURE METHODS

DNA nanotechnology

(2017) Nadrian C. Seeman et al.   Nature Reviews Materials

Advances in the molecular dynamics flexible fitting method for cryo-EM modeling

(2016) Ryan McGreevy et al.   METHODS

Imaging and force probing RNA by atomic force microscopy

(2016) Peter Schön   METHODS

The development of cryo-EM into a mainstream structural biology technique

(2016) Eva Nogales   NATURE METHODS

Structure of a group II intron in complex with its reverse transcriptase

(2016) Guosheng Qu et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

How cryo-electron microscopy and X-ray crystallography complement each other

(2016) Hong-Wei Wang et al.   PROTEIN SCIENCE

Structure of a group II intron in complex with its reverse transcriptase

(2016) Guosheng Qu et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

SAXS studies of RNA: structures, dynamics, and interactions with partners

(2016) Yujie Chen et al.   Wiley Interdisciplinary Reviews-RNA

CTFFIND4: Fast and accurate defocus estimation from electron micrographs

(2015) Alexis Rohou et al.   JOURNAL OF STRUCTURAL BIOLOGY

How do metal ions direct ribozyme folding?

(2015) Natalia A. Denesyuk et al.   Nature Chemistry

RNA quaternary structure and global symmetry

(2015) Christopher P. Jones et al.   TRENDS IN BIOCHEMICAL SCIENCES

RNA Self-Assembly and RNA Nanotechnology

(2014) Wade W. Grabow et al.   ACCOUNTS OF CHEMICAL RESEARCH

New molecular engineering approaches for crystallographic studies of large RNAs

(2014) Jinwei Zhang et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Insights into RNA structure and function from genome-wide studies

(2014) Stefanie A. Mortimer et al.   NATURE REVIEWS GENETICS

Quantifying the local resolution of cryo-EM density maps

(2013) Alp Kucukelbir et al.   NATURE METHODS

Pervasive Transcription of the Human Genome Produces Thousands of Previously Unidentified Long Intergenic Noncoding RNAs

(2013) Matthew J. Hangauer et al.   PLoS Genetics

PHENIX: a comprehensive Python-based system for macromolecular structure solution

(2010) Paul D. Adams et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Nanomaterials Based on DNA

(2010) Nadrian C. Seeman   Annual Review of Biochemistry

Use of the spliceosomal protein U1A to facilitate crystallization and structure determination of complex RNAs

(2010) Adrian R. Ferré-D’Amaré   METHODS

The emerging field of RNA nanotechnology

(2010) Peixuan Guo   Nature Nanotechnology

A portable RNA sequence whose recognition by a synthetic antibody facilitates structural determination

(2010) Yelena Koldobskaya et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch

(2009) Alexander Serganov et al.   NATURE

SPIDER image processing for single-particle reconstruction of biological macromolecules from electron micrographs

(2009) Tanvir R Shaikh et al.   Nature Protocols

Computational strategies for the automated design of RNA nanoscale structures from building blocks using NanoTiler

(2008) Eckart Bindewald et al.   JOURNAL OF MOLECULAR GRAPHICS & MODELLING

Exploring TAR–RNA aptamer loop–loop interaction by X-ray crystallography, UV spectroscopy and surface plasmon resonance

(2008) Isabelle Lebars et al.   NUCLEIC ACIDS RESEARCH

A relaxed active site after exon ligation by the group I intron

(2008) S. V. Lipchock et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Analysis of branched nucleic acid structure using comparative gel electrophoresis

(2008) David M. J. Lilley   QUARTERLY REVIEWS OF BIOPHYSICS