Linking the Salmonella enterica 1,2-Propanediol Utilization Bacterial Microcompartment Shell to the Enzymatic Core via the Shell Protein PduB

Mechanisms of Scaffold-Mediated Microcompartment Assembly and Size Control

(2021) Farzaneh Mohajerani et al.   ACS Nano

A Survey of Bacterial Microcompartment Distribution in the Human Microbiome

(2021) Kunica Asija et al.   Frontiers in Microbiology

Computational and Experimental Approaches to Controlling Bacterial Microcompartment Assembly

(2021) Yaohua Li et al.   ACS Central Science

A catalog of the diversity and ubiquity of bacterial microcompartments

(2021) Markus Sutter et al.   Nature Communications

Density-based binning of gene clusters to infer function or evolutionary history using GeneGrouper

(2021) Alexander G McFarland et al.   BIOINFORMATICS

Bacterial microcompartments and their role in pathogenicity

(2021) Michael B Prentice   CURRENT OPINION IN MICROBIOLOGY

Bacterial microcompartments: tiny organelles with big potential

(2021) Nolan W Kennedy et al.   CURRENT OPINION IN MICROBIOLOGY

SciPy 1.0: fundamental algorithms for scientific computing in Python

(2020) Pauli Virtanen et al.   NATURE METHODS

Effect of metabolosome encapsulation peptides on enzyme activity, coaggregation, incorporation, and bacterial microcompartment formation

(2020) Rokas Juodeikis et al.   MicrobiologyOpen

A genomic integration platform for heterologous cargo encapsulation in 1,2-propanediol utilization bacterial microcompartments

(2020) Taylor M. Nichols et al.   BIOCHEMICAL ENGINEERING JOURNAL

Apparent size and morphology of bacterial microcompartments varies with technique

(2020) Nolan W. Kennedy et al.   PLoS One

Decoding the stoichiometric composition and organisation of bacterial metabolosomes

(2020) Mengru Yang et al.   Nature Communications

Formation and function of bacterial organelles

(2020) Chris Greening et al.   NATURE REVIEWS MICROBIOLOGY

Self-assembling Shell Proteins PduA and PduJ have Essential and Redundant Roles in Bacterial Microcompartment Assembly

(2020) Nolan W. Kennedy et al.   JOURNAL OF MOLECULAR BIOLOGY

The Plasticity of Molecular Interactions Governs Bacterial Microcompartment Shell Assembly

(2019) Basil J. Greber et al.   STRUCTURE

The EMBL-EBI search and sequence analysis tools APIs in 2019

(2019) Fábio Madeira et al.   NUCLEIC ACIDS RESEARCH

Bacterial microcompartments

(2018) Cheryl A. Kerfeld et al.   NATURE REVIEWS MICROBIOLOGY

The N Terminus of the PduB Protein Binds the Protein Shell of the Pdu Microcompartment to Its Enzymatic Core

(2017) Brent P. Lehman et al.   JOURNAL OF BACTERIOLOGY

Assembly principles and structure of a 6.5-MDa bacterial microcompartment shell

(2017) Markus Sutter et al.   SCIENCE

Evidence for Improved Encapsulated Pathway Behavior in a Bacterial Microcompartment through Shell Protein Engineering

(2017) Marilyn F. Slininger Lee et al.   ACS Synthetic Biology

A systems-level model reveals that 1,2-Propanediol utilization microcompartments enhance pathway flux through intermediate sequestration

(2017) Christopher M. Jakobson et al.   PLoS Computational Biology

Assembly, function and evolution of cyanobacterial carboxysomes

(2016) Cheryl A Kerfeld et al.   CURRENT OPINION IN PLANT BIOLOGY

Employing bacterial microcompartment technology to engineer a shell-free enzyme-aggregate for enhanced 1,2-propanediol production in Escherichia coli

(2016) Matthew J. Lee et al.   METABOLIC ENGINEERING

The function of the PduJ microcompartment shell protein is determined by the genomic position of its encoding gene

(2016) Chiranjit Chowdhury et al.   MOLECULAR MICROBIOLOGY

Magnetosome biogenesis in magnetotactic bacteria

(2016) René Uebe et al.   NATURE REVIEWS MICROBIOLOGY

Origin and evolution of metabolic sub-cellular compartmentalization in eukaryotes

(2015) Toni Gabaldón et al.   BIOCHIMIE

The PduL Phosphotransacylase Is Used To Recycle Coenzyme A within the Pdu Microcompartment

(2015) Yu Liu et al.   JOURNAL OF BACTERIOLOGY

Selective molecular transport through the protein shell of a bacterial microcompartment organelle

(2015) Chiranjit Chowdhury et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial microcompartments and the modular construction of microbial metabolism

(2015) Cheryl A. Kerfeld et al.   TRENDS IN MICROBIOLOGY

Exploring Bacterial Organelle Interactomes: A Model of the Protein-Protein Interaction Network in the Pdu Microcompartment

(2015) Julien Jorda et al.   PLoS Computational Biology

Structural Insights into Higher Order Assembly and Function of the Bacterial Microcompartment Protein PduA

(2014) Allan Pang et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Engineering Transcriptional Regulation to Control Pdu Microcompartment Formation

(2014) Edward Y. Kim et al.   PLoS One

Solution Structure of a Bacterial Microcompartment Targeting Peptide and Its Application in the Construction of an Ethanol Bioreactor

(2014) Andrew D. Lawrence et al.   ACS Synthetic Biology

A Taxonomy of Bacterial Microcompartment Loci Constructed by a Novel Scoring Method

(2014) Seth D. Axen et al.   PLoS Computational Biology

Bacterial microcompartment shells of diverse functional types possess pentameric vertex proteins

(2013) Nicole M. Wheatley et al.   PROTEIN SCIENCE

Substrate channels revealed in the trimericLactobacillus reuteribacterial microcompartment shell protein PduB

(2012) Allan Pang et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

The PduM Protein Is a Structural Component of the Microcompartments Involved in Coenzyme B12-Dependent 1,2-Propanediol Degradation by Salmonella enterica

(2012) S. Sinha et al.   JOURNAL OF BACTERIOLOGY

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

The PduQ Enzyme Is an Alcohol Dehydrogenase Used to Recycle NAD+ Internally within the Pdu Microcompartment of Salmonella enterica

(2012) Shouqiang Cheng et al.   PLoS One

Interactions between the termini of lumen enzymes and shell proteins mediate enzyme encapsulation into bacterial microcompartments

(2012) C. Fan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The N-Terminal Region of the Medium Subunit (PduD) Packages Adenosylcobalamin-Dependent Diol Dehydratase (PduCDE) into the Pdu Microcompartment

(2011) C. Fan et al.   JOURNAL OF BACTERIOLOGY

Structural Insight into the Mechanisms of Transport across theSalmonella entericaPdu Microcompartment Shell

(2010) Christopher S. Crowley et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Synthesis of Empty Bacterial Microcompartments, Directed Organelle Protein Incorporation, and Evidence of Filament-Associated Organelle Movement

(2010) Joshua B. Parsons et al.   MOLECULAR CELL

Characterisation of PduS, the pdu Metabolosome Corrin Reductase, and Evidence of Substructural Organisation within the Bacterial Microcompartment

(2010) Joshua B. Parsons et al.   PLoS One

Short N-terminal sequences package proteins into bacterial microcompartments

(2010) C. Fan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

(2009) A. M. Waterhouse et al.   BIOINFORMATICS

Golden Gate Shuffling: A One-Pot DNA Shuffling Method Based on Type IIs Restriction Enzymes

(2009) Carola Engler et al.   PLoS One

Microcompartments for B12-Dependent 1,2-Propanediol Degradation Provide Protection from DNA and Cellular Damage by a Reactive Metabolic Intermediate

(2008) E. M. Sampson et al.   JOURNAL OF BACTERIOLOGY