Ubiquitous Gammaproteobacteria dominate dark carbon fixation in coastal sediments

Microbial carbon metabolism associated with electrogenic sulphur oxidation in coastal sediments

(2015) Diana Vasquez-Cardenas et al.   ISME Journal

Global dispersion and local diversification of the methane seep microbiome

(2015) S. Emil Ruff et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic resolution of linkages in carbon, nitrogen, and sulfur cycling among widespread estuary sediment bacteria

(2015) Brett J Baker et al.   Microbiome

Indications for algae-degrading benthic microbial communities in deep-sea sediments along the Antarctic Polar Front

(2014) S. Emil Ruff et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

A novel hydrogen oxidizer amidst the sulfur-oxidizing Thiomicrospira lineage

(2014) Moritz Hansen et al.   ISME Journal

Bacterial and Archaeal Communities in Sediments of the North Chinese Marginal Seas

(2014) Jiwen Liu et al.   MICROBIAL ECOLOGY

Chemoautotrophic Carbon Fixation Rates and Active Bacterial Communities in Intertidal Marine Sediments

(2014) Henricus T. S. Boschker et al.   PLoS One

The Fate of Nitrate in Intertidal Permeable Sediments

(2014) Hannah K. Marchant et al.   PLoS One

The Role of Hydrogen for Sulfurimonas denitrificans’ Metabolism

(2014) Yuchen Han et al.   PLoS One

Metaproteomics reveals differential modes of metabolic coupling among ubiquitous oxygen minimum zone microbes

(2014) A. K. Hawley et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phylogenetic and morphologic complexity of giant sulphur bacteria

(2013) Verena Salman et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

SUP05 Dominates the Gammaproteobacterial Sulfur Oxidizer Assemblages in Pelagic Redoxclines of the Central Baltic and Black Seas

(2013) Sabine Glaubitz et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Dark inorganic carbon fixation sustains the functioning of benthic deep-sea ecosystems

(2013) Massimiliano Molari et al.   GLOBAL BIOGEOCHEMICAL CYCLES

Sulfur oxidizers dominate carbon fixation at a biogeochemical hot spot in the dark ocean

(2013) Timothy E Mattes et al.   ISME Journal

Analysis of the bacterial community in the two typical intertidal sediments of Bohai Bay, China by pyrosequencing

(2013) Liping Wang et al.   MARINE POLLUTION BULLETIN

Bacterial community structure and its regulating factors in the intertidal sediment along the Liaodong Bay of Bohai Sea, China

(2013) Binghui Zheng et al.   MICROBIOLOGICAL RESEARCH

Roseobacter clade bacteria are abundant in coastal sediments and encode a novel combination of sulfur oxidation genes

(2012) Sabine Lenk et al.   ISME Journal

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Advection and diffusion determine vertical distribution of microbial communities in intertidal sediments as revealed by combined biogeochemical and molecular biological analysis

(2012) Michael Seidel et al.   ORGANIC GEOCHEMISTRY

Evidence for hydrogen oxidation and metabolic plasticity in widespread deep-sea sulfur-oxidizing bacteria

(2012) K. Anantharaman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Metaproteomics of a gutless marine worm and its symbiotic microbial community reveal unusual pathways for carbon and energy use

(2012) M. Kleiner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Acidiferrobacter thiooxydans, gen. nov. sp. nov.; an acidophilic, thermo-tolerant, facultatively anaerobic iron- and sulfur-oxidizer of the family Ectothiorhodospiraceae

(2011) Kevin B. Hallberg et al.   EXTREMOPHILES

Chemoautotrophy in the ocean

(2011) Jack J. Middelburg   GEOPHYSICAL RESEARCH LETTERS

Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea

(2011) Daniel PR Herlemann et al.   ISME Journal

Diversity and dynamics of rare and of resident bacterial populations in coastal sands

(2011) Angélique Gobet et al.   ISME Journal

Microbial Ecology of the Dark Ocean above, at, and below the Seafloor

(2011) B. N. Orcutt et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Sulfur globule oxidation in green sulfur bacteria is dependent on the dissimilatory sulfite reductase system

(2011) C. Holkenbrink et al.   MICROBIOLOGY-SGM

Hydrogen is an energy source for hydrothermal vent symbioses

(2011) Jillian M. Petersen et al.   NATURE

IMG: the integrated microbial genomes database and comparative analysis system

(2011) V. M. Markowitz et al.   NUCLEIC ACIDS RESEARCH

Genome and physiology of a model Epsilonproteobacterium responsible for sulfide detoxification in marine oxygen depletion zones

(2011) J. Grote et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Deep subseafloor microbial cells on physiological standby

(2011) B. B. Jorgensen   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Potential for Chemolithoautotrophy Among Ubiquitous Bacteria Lineages in the Dark Ocean

(2011) B. K. Swan et al.   SCIENCE

Beyond the Calvin Cycle: Autotrophic Carbon Fixation in the Ocean

(2010) Michael Hügler et al.   Annual Review of Marine Science

Major contribution of autotrophy to microbial carbon cycling in the deep North Atlantic’s interior

(2010) Thomas Reinthaler et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Novel groups of Gammaproteobacteria catalyse sulfur oxidation and carbon fixation in a coastal, intertidal sediment

(2010) Sabine Lenk et al.   ENVIRONMENTAL MICROBIOLOGY

Tide-driven deep pore-water flow in intertidal sand flats

(2010) Hans Røy et al.   LIMNOLOGY AND OCEANOGRAPHY

High abundance and dark CO2fixation of chemolithoautotrophic prokaryotes in anoxic waters of the Baltic Sea

(2010) Jost GÜnter et al.   LIMNOLOGY AND OCEANOGRAPHY

A Cryptic Sulfur Cycle in Oxygen-Minimum-Zone Waters off the Chilean Coast

(2010) D. E. Canfield et al.   SCIENCE

Bacterial diversity and biogeography in deep-sea surface sediments of the South Atlantic Ocean

(2009) Regina Schauer et al.   ISME Journal

Functioning of intertidal flats inferred from temporal and spatial dynamics of O2, H2S and pH in their surface sediment

(2009) Stefan Jansen et al.   OCEAN DYNAMICS

Endosymbioses between bacteria and deep-sea siboglinid tubeworms from an Arctic Cold Seep (Haakon Mosby Mud Volcano, Barents Sea)

(2008) Tina Lösekann et al.   ENVIRONMENTAL MICROBIOLOGY

Identity and abundance of active sulfate-reducing bacteria in deep tidal flat sediments determined by directed cultivation and CARD-FISH analysis

(2008) Antje Gittel et al.   ENVIRONMENTAL MICROBIOLOGY

Rapid phylogenetic dissection of prokaryotic community structure in tidal flat using pyrosequencing

(2008) Bong-Soo Kim et al.   JOURNAL OF MICROBIOLOGY

Detoxification of sulphidic African shelf waters by blooming chemolithotrophs

(2008) Gaute Lavik et al.   NATURE

A single-cell view on the ecophysiology of anaerobic phototrophic bacteria

(2008) N. Musat et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA