标题
Environmental Microbial Community Proteomics: Status, Challenges and Perspectives
作者
关键词
-
出版物
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
Volume 17, Issue 8, Pages 1275
出版商
MDPI AG
发表日期
2016-08-05
DOI
10.3390/ijms17081275
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- The ecological and physiological responses of the microbial community from a semiarid soil to hydrocarbon contamination and its bioremediation using compost amendment
- (2016) F. Bastida et al. Journal of Proteomics
- Deforestation fosters bacterial diversity and the cyanobacterial community responsible for carbon fixation processes under semiarid climate: a metaproteomics study
- (2015) Felipe Bastida et al. APPLIED SOIL ECOLOGY
- Combining metagenomics with metaproteomics and stable isotope probing reveals metabolic pathways used by a naturally occurring marine methylotroph
- (2015) Carolina Grob et al. ENVIRONMENTAL MICROBIOLOGY
- A decade of metaproteomics: Where we stand and what the future holds
- (2015) Paul Wilmes et al. PROTEOMICS
- Shotgun metaproteomic profiling of biomimetic anaerobic digestion processes treating sewage sludge
- (2015) Ariane Bize et al. PROTEOMICS
- Metaproteomics of aquatic microbial communities in a deep and stratified estuary
- (2015) David Colatriano et al. PROTEOMICS
- EXPLORATION OF PLASMA BIOMARKERS FOR ALZHEIMER'S DISEASE USING ISOTOPIC TANDEM MASS TAGS AND A COMBINED DIRECTED/DATA-DEPENDENT ACQUISITION NLC-MS/MS METHOD
- (2014) Malcolm Andrew Ward et al. Alzheimers & Dementia
- Microbial genomics, transcriptomics and proteomics: new discoveries in decomposition research using complementary methods
- (2014) Petr Baldrian et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Metaproteomic analysis of a winter to spring succession in coastal northwest Atlantic Ocean microbial plankton
- (2014) Anna A Georges et al. ISME Journal
- Single-cell enabled comparative genomics of a deep ocean SAR11 bathytype
- (2014) J Cameron Thrash et al. ISME Journal
- Comparing SILAC- and Stable Isotope Dimethyl-Labeling Approaches for Quantitative Proteomics
- (2014) Ho-Tak Lau et al. JOURNAL OF PROTEOME RESEARCH
- Metaproteomics of soils from semiarid environment: Functional and phylogenetic information obtained with different protein extraction methods
- (2014) F. Bastida et al. Journal of Proteomics
- Metaproteomic Survey of Six Aquatic Habitats: Discovering the Identities of Microbial Populations Active in Biogeochemical Cycling
- (2014) Buck T. Hanson et al. MICROBIAL ECOLOGY
- Metaproteomics: Evaluation of protein extraction from activated sludge
- (2014) Susan Hove Hansen et al. PROTEOMICS
- Microbial proteins and oceanic nutrient cycles
- (2014) C. M. Moore SCIENCE
- Multiple nutrient stresses at intersecting Pacific Ocean biomes detected by protein biomarkers
- (2014) M. A. Saito et al. SCIENCE
- A complex iron-calcium cofactor catalyzing phosphotransfer chemistry
- (2014) S. C. Yong et al. SCIENCE
- Marine metaproteomics: deciphering the microbial metabolic food web
- (2014) Timothy J. Williams et al. TRENDS IN MICROBIOLOGY
- Microbial community structure and functioning in marine sediments associated with diffuse hydrothermal venting assessed by integrated meta-omics
- (2013) Tim Urich et al. ENVIRONMENTAL MICROBIOLOGY
- Geochemical, metagenomic and metaproteomic insights into trace metal utilization by methane-oxidizing microbial consortia in sulphidic marine sediments
- (2013) Jennifer B. Glass et al. ENVIRONMENTAL MICROBIOLOGY
- Marine metaproteomics: Current status and future directions
- (2013) Da-Zhi Wang et al. Journal of Proteomics
- Computational meta'omics for microbial community studies
- (2013) N. Segata et al. Molecular Systems Biology
- Fluctuations in Species-Level Protein Expression Occur during Element and Nutrient Cycling in the Subsurface
- (2013) Michael J. Wilkins et al. PLoS One
- Metaproteomics to Unravel Major Microbial Players in Leaf Litter & Soil Environments: Challenges & Perspectives
- (2013) Dörte Becher et al. PROTEOMICS
- Environmental proteomics reveals early microbial community responses to biostimulation at a uranium- and nitrate-contaminated site
- (2013) Karuna Chourey et al. PROTEOMICS
- Metaproteomics Reveals Abundant Transposase Expression in Mutualistic Endosymbionts
- (2013) M. Kleiner et al. mBio
- Method Development for Metaproteomic Analyses of Marine Biofilms
- (2012) Dagmar Hajkova Leary et al. ANALYTICAL CHEMISTRY
- Integrated metagenomic and metaproteomic analyses of an ANME-1-dominated community in marine cold seep sediments
- (2012) Runar Stokke et al. ENVIRONMENTAL MICROBIOLOGY
- Who is who in litter decomposition? Metaproteomics reveals major microbial players and their biogeochemical functions
- (2012) Thomas Schneider et al. ISME Journal
- Metaproteogenomic analysis of a community of sponge symbionts
- (2012) Michael Liu et al. ISME Journal
- A metaproteomic assessment of winter and summer bacterioplankton from Antarctic Peninsula coastal surface waters
- (2012) Timothy J Williams et al. ISME Journal
- Targeted proteome investigation via selected reaction monitoring mass spectrometry
- (2012) Alessio Maiolica et al. Journal of Proteomics
- Role for urea in nitrification by polar marine Archaea
- (2012) L. Alonso-Saez et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Metaproteomics of a gutless marine worm and its symbiotic microbial community reveal unusual pathways for carbon and energy use
- (2012) M. Kleiner et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Deep metaproteomic analysis of human salivary supernatant
- (2012) Pratik Jagtap et al. PROTEOMICS
- Soil metaproteomics – Comparative evaluation of protein extraction protocols
- (2012) Katharina M. Keiblinger et al. SOIL BIOLOGY & BIOCHEMISTRY
- Protein phosphorylation in bacterial signal transduction
- (2011) Ahasanul Kobir et al. BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS
- Metaproteomic characterization of dissolved organic matter in the water column of the South China Sea
- (2011) Da-Zhi Wang et al. LIMNOLOGY AND OCEANOGRAPHY
- Shotgun proteomics: Tools for analysis of marine particulate proteins
- (2011) Hong-Po Dong et al. LIMNOLOGY AND OCEANOGRAPHY-METHODS
- Efficient de novo assembly of single-cell bacterial genomes from short-read data sets
- (2011) Hamidreza Chitsaz et al. NATURE BIOTECHNOLOGY
- Use of stable isotope labeling by amino acids in cell culture as a spike-in standard in quantitative proteomics
- (2011) Tamar Geiger et al. Nature Protocols
- Comparative Metaproteomic Analysis on Consecutively Rehmannia glutinosa-Monocultured Rhizosphere Soil
- (2011) Linkun Wu et al. PLoS One
- Application of isotope dilution ICP–MS techniques to quantitative proteomics
- (2010) Jörg Bettmer ANALYTICAL AND BIOANALYTICAL CHEMISTRY
- GeoChip-Based Analysis of the Functional Gene Diversity and Metabolic Potential of Microbial Communities in Acid Mine Drainage
- (2010) Jianping Xie et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Comparative proteomics and activity of a green sulfur bacterium through the water column of Lake Cadagno, Switzerland
- (2010) Kirsten S. Habicht et al. ENVIRONMENTAL MICROBIOLOGY
- An integrative study of a meromictic lake ecosystem in Antarctica
- (2010) Federico M Lauro et al. ISME Journal
- Metaproteogenomic analysis of a dominant green sulfur bacterium from Ace Lake, Antarctica
- (2010) Charmaine Ng et al. ISME Journal
- Environmental proteomics of microbial plankton in a highly productive coastal upwelling system
- (2010) Sarah M Sowell et al. ISME Journal
- Comparative metaproteomics reveals ocean-scale shifts in microbial nutrient utilization and energy transduction
- (2010) Robert M Morris et al. ISME Journal
- Characterization of Metaproteomics in Crop Rhizospheric Soil
- (2010) Hai-Bin Wang et al. JOURNAL OF PROTEOME RESEARCH
- Characterization of particulate organic matter in the water column of the South China Sea using a shotgun proteomic approach
- (2010) Hong-Po Dong et al. LIMNOLOGY AND OCEANOGRAPHY
- Microbial metalloproteomes are largely uncharacterized
- (2010) Aleksandar Cvetkovic et al. NATURE
- Tracing Changes in the Microbial Community of a Hydrocarbon-Polluted Soil by Culture-Dependent Proteomics
- (2010) F. BASTIDA et al. PEDOSPHERE
- Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea
- (2010) J. McCarren et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Proteome analysis of fungal and bacterial involvement in leaf litter decomposition
- (2010) Thomas Schneider et al. PROTEOMICS
- Metaproteomic characterization of a soil microbial community following carbon amendment
- (2010) Mark A. Williams et al. SOIL BIOLOGY & BIOCHEMISTRY
- Proteogenomic Monitoring of Geobacter Physiology during Stimulated Uranium Bioremediation
- (2009) M. J. Wilkins et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Community Genomic and Proteomic Analyses of Chemoautotrophic Iron-Oxidizing "Leptospirillum rubarum" (Group II) and "Leptospirillum ferrodiazotrophum" (Group III) Bacteria in Acid Mine Drainage Biofilms
- (2009) D. S. A. Goltsman et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Microbial Protein in Soil: Influence of Extraction Method and C Amendment on Extraction and Recovery
- (2009) Erin B. Taylor et al. MICROBIAL ECOLOGY
- Functional analysis of natural microbial consortia using community proteomics
- (2009) Nathan C. VerBerkmoes et al. NATURE REVIEWS MICROBIOLOGY
- Improving soil protein extraction for metaproteome analysis and glomalin-related soil protein detection
- (2009) Shaoning Chen et al. PROTEOMICS
- Environmental proteomics: Analysis of structure and function of microbial communities
- (2009) Thomas Schneider et al. PROTEOMICS
- Proteomics-inferred genome typing (PIGT) demonstrates inter-population recombination as a strategy for environmental adaptation
- (2008) Vincent J. Denef et al. ENVIRONMENTAL MICROBIOLOGY
- Molecular approaches to diagnosing nutritional physiology in harmful algae: Implications for studying the effects of eutrophication
- (2008) Sonya T. Dyhrman HARMFUL ALGAE
- Transport functions dominate the SAR11 metaproteome at low-nutrient extremes in the Sargasso Sea
- (2008) Sarah M Sowell et al. ISME Journal
- Community proteogenomics highlights microbial strain-variant protein expression within activated sludge performing enhanced biological phosphorus removal
- (2008) Paul Wilmes et al. ISME Journal
- Identification of Thioredoxin Disulfide Targets Using a Quantitative Proteomics Approach Based on Isotope-Coded Affinity Tags
- (2008) Per Hägglund et al. JOURNAL OF PROTEOME RESEARCH
- Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques
- (2008) Rudolf Amann et al. NATURE REVIEWS MICROBIOLOGY
- Metaproteomics Provides Functional Insight into Activated Sludge Wastewater Treatment
- (2008) Paul Wilmes et al. PLoS One
- Investigating the Fate of Activated Sludge Extracellular Proteins in Sludge Digestion Using Sodium Dodecyl Sulfate Polyacrylamide Gel Electrophoresis
- (2008) Chul Park et al. WATER ENVIRONMENT RESEARCH
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search