Complex marine microbial communities partition metabolism of scarce resources over the diel cycle
出版年份 2022 全文链接
标题
Complex marine microbial communities partition metabolism of scarce resources over the diel cycle
作者
关键词
-
出版物
Nature Ecology & Evolution
Volume 6, Issue 2, Pages 218-229
出版商
Springer Science and Business Media LLC
发表日期
2022-01-21
DOI
10.1038/s41559-021-01606-w
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Diel transcriptional oscillations of light-sensitive regulatory elements in open-ocean eukaryotic plankton communities
- (2021) Sacha N. Coesel et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Particulate Metabolites and Transcripts Reflect Diel Oscillations of Microbial Activity in the Surface Ocean
- (2021) Angela K. Boysen et al. mSystems
- Prochlorococcus extracellular vesicles: molecular composition and adsorption to diverse microbes
- (2021) Steven J. Biller et al. ENVIRONMENTAL MICROBIOLOGY
- A single-cell polony method reveals low levels of infected Prochlorococcus in oligotrophic waters despite high cyanophage abundances
- (2020) Noor Mruwat et al. ISME Journal
- Combined pigment and metatranscriptomic analysis reveals highly synchronized diel patterns of phenotypic light response across domains in the open oligotrophic ocean
- (2020) Kevin W. Becker et al. ISME Journal
- Multiomics resolution of molecular events during a day in the life of Chlamydomonas
- (2019) Daniela Strenkert et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Highly variable mRNA half‐life time within marine bacterial taxa and functional genes
- (2019) Paul A. Steiner et al. ENVIRONMENTAL MICROBIOLOGY
- Diel transcriptional response of a California Current plankton microbiome to light, low iron, and enduring viral infection
- (2019) B. C. Kolody et al. ISME Journal
- Sulfonate-based networks between eukaryotic phytoplankton and heterotrophic bacteria in the surface ocean
- (2019) Bryndan P. Durham et al. Nature Microbiology
- Diel Oscillation of Microbial Gene Transcripts Declines With Depth in Oligotrophic Ocean Waters
- (2019) Alice Vislova et al. Frontiers in Microbiology
- Persistent Core Populations Shape the Microbiome Throughout the Water Column in the North Pacific Subtropical Gyre
- (2019) Daniel R. Mende et al. Frontiers in Microbiology
- Transcriptional patterns of Emiliania huxleyi in the North Pacific Subtropical Gyre reveal the daily rhythms of its metabolic potential
- (2019) María D. Hernández Limón et al. ENVIRONMENTAL MICROBIOLOGY
- Assessing the performance of different approaches for functional and taxonomic annotation of metagenomes
- (2019) Javier Tamames et al. BMC GENOMICS
- Best-Matched Internal Standard Normalization in Liquid Chromatography–Mass Spectrometry Metabolomics Applied to Environmental Samples
- (2018) Angela K. Boysen et al. ANALYTICAL CHEMISTRY
- Coordinated gene expression between Trichodesmium and its microbiome over day–night cycles in the North Pacific Subtropical Gyre
- (2018) Kyle R Frischkorn et al. ISME Journal
- Seasonal resource conditions favor a summertime increase in North Pacific diatom–diazotroph associations
- (2018) Christopher L. Follett et al. ISME Journal
- Nitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes
- (2018) Tom O. Delmont et al. Nature Microbiology
- Periodic and coordinated gene expression between a diazotroph and its diatom host
- (2018) Matthew J. Harke et al. ISME Journal
- Rhythmicity of coastal marine picoeukaryotes, bacteria and archaea despite irregular environmental perturbations
- (2018) Stefan Lambert et al. ISME Journal
- NanoSIMS single cell analyses reveal the contrasting nitrogen sources for small phytoplankton
- (2018) Hugo Berthelot et al. ISME Journal
- Functional trait dissimilarity drives both species complementarity and competitive disparity
- (2017) Cameron Wagg et al. FUNCTIONAL ECOLOGY
- Productivity diagnosed from the diel cycle of particulate carbon in the North Pacific Subtropical Gyre
- (2017) Angelicque E. White et al. GEOPHYSICAL RESEARCH LETTERS
- Diel cycling and long-term persistence of viruses in the ocean’s euphotic zone
- (2017) Frank O. Aylward et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Ocean biogeochemistry modeled with emergent trait-based genomics
- (2017) V. J. Coles et al. SCIENCE
- Coordinated regulation of growth, activity and transcription in natural populations of the unicellular nitrogen-fixing cyanobacterium Crocosphaera
- (2017) Samuel T. Wilson et al. Nature Microbiology
- Environmental drivers of a microbial genomic transition zone in the ocean’s interior
- (2017) Daniel R. Mende et al. Nature Microbiology
- LOBSTAHS: An Adduct-Based Lipidomics Strategy for Discovery and Identification of Oxidative Stress Biomarkers
- (2016) James R. Collins et al. ANALYTICAL CHEMISTRY
- How to quantify the temporal storage effect using simulations instead of math
- (2016) Stephen P. Ellner et al. ECOLOGY LETTERS
- KEGG as a reference resource for gene and protein annotation
- (2015) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- Microbial community transcriptional networks are conserved in three domains at ocean basin scales
- (2015) Frank O. Aylward et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Functional group-specific traits drive phytoplankton dynamics in the oligotrophic ocean
- (2015) Harriet Alexander et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Structure and function of the global ocean microbiome
- (2015) S. Sunagawa et al. SCIENCE
- Tara Oceans studies plankton at planetary scale
- (2015) P. Bork et al. SCIENCE
- Phenology of particle size distributions and primary productivity in the North Pacific subtropical gyre (Station ALOHA)
- (2015) Angelicque E. White et al. JOURNAL OF GEOPHYSICAL RESEARCH-OCEANS
- HTSeq--a Python framework to work with high-throughput sequencing data
- (2014) S. Anders et al. BIOINFORMATICS
- UProC: tools for ultra-fast protein domain classification
- (2014) Peter Meinicke BIOINFORMATICS
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- Detecting Rhythms in Time Series with RAIN
- (2014) Paul F. Thaben et al. JOURNAL OF BIOLOGICAL RHYTHMS
- Multispecies diel transcriptional oscillations in open ocean heterotrophic bacterial assemblages
- (2014) E. A. Ottesen et al. SCIENCE
- The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing
- (2014) Patrick J. Keeling et al. PLOS BIOLOGY
- Trait-based tests of coexistence mechanisms
- (2013) Peter B. Adler et al. ECOLOGY LETTERS
- Midwater zooplankton and suspended particle dynamics in the North Pacific Subtropical Gyre: A stable isotope perspective
- (2013) Cecelia C. S. Hannides et al. LIMNOLOGY AND OCEANOGRAPHY
- Pattern and synchrony of gene expression among sympatric marine microbial populations
- (2013) E. A. Ottesen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data
- (2012) Evguenia Kopylova et al. BIOINFORMATICS
- PANDAseq: paired-end assembler for illumina sequences
- (2012) Andre P Masella et al. BMC BIOINFORMATICS
- Sizing up metatranscriptomics
- (2012) Mary Ann Moran et al. ISME Journal
- DIEL VARIATIONS OF CARBOHYDRATES AND NEUTRAL LIPIDS IN NITROGEN-SUFFICIENT AND NITROGEN-STARVED CYCLOSTAT CULTURES OF ISOCHRYSIS SP.1
- (2012) Thomas Lacour et al. JOURNAL OF PHYCOLOGY
- Molecular Ion-Independent Quantification of Polar Glycerolipid Classes in Marine Plankton Using Triple Quadrupole MS
- (2012) Kimberly J. Popendorf et al. LIPIDS
- Transcriptome and Proteome Dynamics of a Light-Dark Synchronized Bacterial Cell Cycle
- (2012) Jacob R. Waldbauer et al. PLoS One
- Predictable and efficient carbon sequestration in the North Pacific Ocean supported by symbiotic nitrogen fixation
- (2012) D. M. Karl et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- CAMERA: An Integrated Strategy for Compound Spectra Extraction and Annotation of Liquid Chromatography/Mass Spectrometry Data Sets
- (2011) Carsten Kuhl et al. ANALYTICAL CHEMISTRY
- Diel rhythmicity of lipid-body formation in a coral-Symbiodinium endosymbiosis
- (2011) W.-N. U. Chen et al. CORAL REEFS
- Adaptive seeds tame genomic sequence comparison
- (2011) S. M. Kielbasa et al. GENOME RESEARCH
- Iron conservation by reduction of metalloenzyme inventories in the marine diazotroph Crocosphaera watsonii
- (2011) M. A. Saito et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Ultra Performance Liquid Chromatography and High Resolution Mass Spectrometry for the Analysis of Plant Lipids
- (2011) Jan Hummel et al. Frontiers in Plant Science
- Skyline: an open source document editor for creating and analyzing targeted proteomics experiments
- (2010) Brendan MacLean et al. BIOINFORMATICS
- Fast and accurate long-read alignment with Burrows–Wheeler transform
- (2010) Heng Li et al. BIOINFORMATICS
- Transporter genes expressed by coastal bacterioplankton in response to dissolved organic carbon
- (2009) Rachel S. Poretsky et al. ENVIRONMENTAL MICROBIOLOGY
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started