The transcriptional regulator HDP1 controls expansion of the inner membrane complex during early sexual differentiation of malaria parasites

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Intrinsically Disordered Regions Direct Transcription Factor In Vivo Binding Specificity

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Conditional expression of PfAP2-G for controlled massive sexual conversion in Plasmodium falciparum

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The PfAP2‐G2 transcription factor is a critical regulator of gametocyte maturation

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Immunofluorescence staining protocol for STED nanoscopy of Plasmodium-infected red blood cells

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Female‐specific gene regulation in malaria parasites by an AP2‐family transcription factor

(2019) Masao Yuda et al.   MOLECULAR MICROBIOLOGY

Hierarchical transcriptional control regulates Plasmodium falciparum sexual differentiation

(2019) Riëtte van Biljon et al.   BMC GENOMICS

Comparative Heterochromatin Profiling Reveals Conserved and Unique Epigenome Signatures Linked to Adaptation and Development of Malaria Parasites

(2018) Sabine A. Fraschka et al.   Cell Host & Microbe

A proteomic analysis unravels novel CORVET and HOPS proteins involved in Toxoplasma gondii secretory organelles biogenesis

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Antibodies to PfsEGXP, An Early Gametocyte Enriched Phosphoprotein, Predict Decreased Plasmodium falciparum Gametocyte Density In Humans

(2018) Christian P Nixon et al.   JOURNAL OF INFECTIOUS DISEASES

GDV1 induces sexual commitment of malaria parasites by antagonizing HP1-dependent gene silencing

(2018) Michael Filarsky et al.   SCIENCE

Changes in genome organization of parasite-specific gene families during the Plasmodium transmission stages

(2018) Evelien M. Bunnik et al.   Nature Communications

Inducible developmental reprogramming redefines commitment to sexual development in the malaria parasite Plasmodium berghei

(2018) Robyn S. Kent et al.   Nature Microbiology

Revisiting the initial steps of sexual development in the malaria parasite Plasmodium falciparum

(2018) Cristina Bancells et al.   Nature Microbiology

Capturing in vivo RNA transcriptional dynamics from the malaria parasite Plasmodium falciparum

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Single-cell RNA sequencing reveals a signature of sexual commitment in malaria parasites

(2017) Asaf Poran et al.   NATURE

Disrupting assembly of the inner membrane complex blocks Plasmodium falciparum sexual stage development

(2017) Molly Parkyn Schneider et al.   PLoS Pathogens

Homeodomain-like DNA binding proteins control the haploid-to-diploid transition in Dictyostelium

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Stochastic Switching of Cell Fate in Microbes

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Orchestrating high-throughput genomic analysis with Bioconductor

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Global transcriptional repression: An initial and essential step forPlasmodiumsexual development

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Heterochromatin Protein 1 Secures Survival and Transmission of Malaria Parasites

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A Plasmodium falciparum Histone Deacetylase Regulates Antigenic Variation and Gametocyte Conversion

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A cascade of DNA-binding proteins for sexual commitment and development in Plasmodium

(2014) Abhinav Sinha et al.   NATURE

A transcriptional switch underlies commitment to sexual development in malaria parasites

(2014) Björn F. C. Kafsack et al.   NATURE

Genome editing in the human malaria parasite Plasmodium falciparum using the CRISPR-Cas9 system

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Inducible Knockdown of Plasmodium Gene Expression Using the glmS Ribozyme

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Crystal Structure of the Human NKX2.5 Homeodomain in Complex with DNA Target

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STAR: ultrafast universal RNA-seq aligner

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Differential analysis of gene regulation at transcript resolution with RNA-seq

(2012) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Consecutive Positive Feedback Loops Create a Bistable Switch that Controls Preadipocyte-to-Adipocyte Conversion

(2012) Byung Ouk Park et al.   Cell Reports

Epigenetic switches: can infidelity govern fate in microbes?

(2011) Dominik Satory et al.   CURRENT OPINION IN MICROBIOLOGY

A malaria gametocytocidal assay using oxidoreduction indicator, alamarBlue

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Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities

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A Bistable Switch Underlying B-Cell Differentiation and Its Disruption by the Environmental Contaminant 2,3,7,8-Tetrachlorodibenzo-p-dioxin

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Identification and Genome-Wide Prediction of DNA Binding Specificities for the ApiAP2 Family of Regulators from the Malaria Parasite

(2010) Tracey L. Campbell et al.   PLoS Pathogens

A Major Role for the Plasmodium falciparum ApiAP2 Protein PfSIP2 in Chromosome End Biology

(2010) Christian Flueck et al.   PLoS Pathogens

The Sequence Alignment/Map format and SAMtools

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Fast and accurate short read alignment with Burrows-Wheeler transform

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Genome-wide Analysis of Heterochromatin Associates Clonally Variant Gene Regulation with Perinuclear Repressive Centers in Malaria Parasites

(2009) Jose-Juan Lopez-Rubio et al.   Cell Host & Microbe

Universal protein-binding microarrays for the comprehensive characterization of the DNA-binding specificities of transcription factors

(2009) Michael F Berger et al.   Nature Protocols

Plasmodium falciparum Heterochromatin Protein 1 Marks Genomic Loci Linked to Phenotypic Variation of Exported Virulence Factors

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