The shadow model: how and why small choices in spatially explicit species distribution models affect predictions
出版年份 2022 全文链接
标题
The shadow model: how and why small choices in spatially explicit species distribution models affect predictions
作者
关键词
-
出版物
PeerJ
Volume 10, Issue -, Pages e12783
出版商
PeerJ
发表日期
2022-02-14
DOI
10.7717/peerj.12783
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- A practical guide to selecting models for exploration, inference, and prediction in ecology
- (2021) Andrew T. Tredennick et al. ECOLOGY
- Bridging the gap between commercial fisheries and survey data to model the spatiotemporal dynamics of marine species
- (2021) Marie‐Christine Rufener et al. ECOLOGICAL APPLICATIONS
- Predicting abundance indices in areas without coverage with a latent spatio-temporal Gaussian model
- (2021) Olav Nikolai Breivik et al. ICES JOURNAL OF MARINE SCIENCE
- Contrasting climate velocity impacts in warm and cool locations show that effects of marine warming are worse in already warmer temperate waters
- (2021) Philina A. English et al. FISH AND FISHERIES
- Monitoring change in a dynamic environment: spatio-temporal modelling of calibrated data from different types of fisheries surveys of Pacific halibut
- (2020) Raymond A. Webster et al. CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES
- Improved understanding and prediction of freshwater fish communities through the use of joint species distribution models
- (2020) Tyler Wagner et al. CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES
- A comparative analysis of dynamic management in marine and terrestrial systems
- (2020) William K Oestreich et al. FRONTIERS IN ECOLOGY AND THE ENVIRONMENT
- Assessing the spatiotemporal persistence of fish distributions: a case study on two red mullet species (Mullus surmuletus and M. barbatus) in the western Mediterranean
- (2020) I Paradinas et al. MARINE ECOLOGY PROGRESS SERIES
- Predictability of Species Distributions Deteriorates Under Novel Environmental Conditions in the California Current System
- (2020) Barbara A. Muhling et al. Frontiers in Marine Science
- How decisions about fitting species distribution models affect conservation outcomes
- (2020) Angela Muscatello et al. CONSERVATION BIOLOGY
- Improving estimates of species distribution change by incorporating local trends
- (2020) Lewis A. K. Barnett et al. ECOGRAPHY
- The surprising sensitivity of index scale to delta-model assumptions: Recommendations for model-based index standardization
- (2020) James T. Thorson et al. FISHERIES RESEARCH
- Towards climate resiliency in fisheries management
- (2019) Kirstin K Holsman et al. ICES JOURNAL OF MARINE SCIENCE
- A comprehensive evaluation of predictive performance of 33 species distribution models at species and community levels
- (2019) Anna Norberg et al. ECOLOGICAL MONOGRAPHS
- Developing spatio-temporal models using multiple data types for evaluating population trends and habitat usage
- (2019) Arnaud Grüss et al. ICES JOURNAL OF MARINE SCIENCE
- Comparing predictions of fisheries bycatch using multiple spatiotemporal species distribution model frameworks
- (2019) Brian C Stock et al. CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES
- Forecasting species range dynamics with process‐explicit models: matching methods to applications
- (2019) Natalie J. Briscoe et al. ECOLOGY LETTERS
- Investigating the value of including depth during spatiotemporal index standardization
- (2019) Kelli F. Johnson et al. FISHERIES RESEARCH
- Understanding the Stochastic Partial Differential Equation Approach to Smoothing
- (2019) David L. Miller et al. JOURNAL OF AGRICULTURAL BIOLOGICAL AND ENVIRONMENTAL STATISTICS
- Trade‐offs in covariate selection for species distribution models: a methodological comparison
- (2019) Stephanie Brodie et al. ECOGRAPHY
- Coupled changes in biomass and distribution drive trends in availability of fish stocks to US West Coast ports
- (2019) Rebecca L Selden et al. ICES JOURNAL OF MARINE SCIENCE
- Interactive spatial scale effects on species distribution modeling: The case of the giant panda
- (2019) Thomas Connor et al. Scientific Reports
- Dynamic spatial heterogeneity reveals interdependence of marine faunal density and fishery removals
- (2019) Lewis A.K. Barnett et al. ECOLOGICAL INDICATORS
- Joint species distribution modelling with the r ‐package H msc
- (2019) Gleb Tikhonov et al. Methods in Ecology and Evolution
- Black swans in space: modelling spatiotemporal processes with extremes
- (2018) Sean C. Anderson et al. ECOLOGY
- Oceanographic drivers of sablefish recruitment in the California Current
- (2018) N. Tolimieri et al. FISHERIES OCEANOGRAPHY
- Projecting shifts in thermal habitat for 686 species on the North American continental shelf
- (2018) James W. Morley et al. PLoS One
- Species distribution modeling: a statistical review with focus in spatio-temporal issues
- (2018) Joaquín Martínez-Minaya et al. STOCHASTIC ENVIRONMENTAL RESEARCH AND RISK ASSESSMENT
- On the relationship between conditional (CAR) and simultaneous (SAR) autoregressive models
- (2018) Jay M. Ver Hoef et al. Spatial Statistics
- Applying spatiotemporal models to monitoring data to quantify fish population responses to the Deepwater Horizon oil spill in the Gulf of Mexico
- (2018) Eric J. Ward et al. ENVIRONMENTAL MONITORING AND ASSESSMENT
- On the choice of the mesh for the analysis of geostatistical data using R-INLA
- (2018) Ana Julia Righetto et al. COMMUNICATIONS IN STATISTICS-THEORY AND METHODS
- block CV: An r package for generating spatially or environmentally separated folds for k -fold cross-validation of species distribution models
- (2018) Roozbeh Valavi et al. Methods in Ecology and Evolution
- Guidance for decisions using the Vector Autoregressive Spatio-Temporal (VAST) package in stock, ecosystem, habitat and climate assessments
- (2018) James T. Thorson FISHERIES RESEARCH
- Validation of ecological state space models using the Laplace approximation
- (2017) Uffe Høgsbro Thygesen et al. ENVIRONMENTAL AND ECOLOGICAL STATISTICS
- Comparing estimates of abundance trends and distribution shifts using single- and multispecies models of fishes and biogenic habitat
- (2017) James T. Thorson et al. ICES JOURNAL OF MARINE SCIENCE
- Benefits and risks of diversification for individual fishers
- (2017) Sean C. Anderson et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Scale of inference: on the sensitivity of habitat models for wide-ranging marine predators to the resolution of environmental data
- (2016) Kylie L. Scales et al. ECOGRAPHY
- TMB: Automatic Differentiation and Laplace Approximation
- (2016) Kasper Kristensen et al. Journal of Statistical Software
- Estimating the spatial scales of landscape effects on abundance
- (2016) Richard Chandler et al. LANDSCAPE ECOLOGY
- Effects of spatial resolution on predicting the distribution of aquatic invasive species in nearshore marine environments
- (2016) JB Lowen et al. MARINE ECOLOGY PROGRESS SERIES
- Model-based inference for estimating shifts in species distribution, area occupied and centre of gravity
- (2016) James T. Thorson et al. Methods in Ecology and Evolution
- Effects of spatial resolution on predicting the distribution of aquatic invasive species in nearshore marine environments
- (2016) JB Lowen et al. MARINE ECOLOGY PROGRESS SERIES
- Is my species distribution model fit for purpose? Matching data and models to applications
- (2015) Gurutzeta Guillera-Arroita et al. GLOBAL ECOLOGY AND BIOGEOGRAPHY
- Geostatistical delta-generalized linear mixed models improve precision for estimated abundance indices for West Coast groundfishes
- (2015) James T. Thorson et al. ICES JOURNAL OF MARINE SCIENCE
- Lotic cyprinid communities can be structured as nest webs and predicted by the stress-gradient hypothesis
- (2015) Brandon K. Peoples et al. JOURNAL OF ANIMAL ECOLOGY
- Stacked species distribution models and macroecological models provide congruent projections of avian species richness under climate change
- (2015) Trisha Distler et al. JOURNAL OF BIOGEOGRAPHY
- Bayesian Spatial Modelling withR-INLA
- (2015) Finn Lindgren et al. Journal of Statistical Software
- Regression Models for Count Data inR
- (2015) Achim Zeileis et al. Journal of Statistical Software
- Spatial semiparametric models improve estimates of species abundance and distribution
- (2014) Andrew Olaf Shelton et al. CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES
- Mapping present and future potential distribution patterns for a meso-grazer guild in the Baltic Sea
- (2014) Sonja Leidenberger et al. JOURNAL OF BIOGEOGRAPHY
- Improving the Use of Species Distribution Models in Conservation Planning and Management under Climate Change
- (2014) Luciana L. Porfirio et al. PLoS One
- The Strength of Nocomis Nest Association Contributes to Patterns of Rarity and Commonness among New River, Virginia Cyprinids
- (2013) Richard M. Pendleton et al. AMERICAN MIDLAND NATURALIST
- A practical guide to MaxEnt for modeling species’ distributions: what it does, and why inputs and settings matter
- (2013) Cory Merow et al. ECOGRAPHY
- Predicting species distributions for conservation decisions
- (2013) Antoine Guisan et al. ECOLOGY LETTERS
- Accounting for space–time interactions in index standardization models
- (2013) James T. Thorson et al. FISHERIES RESEARCH
- Climate Change Impacts on Marine Ecosystems
- (2011) Scott C. Doney et al. Annual Review of Marine Science
- Data weighting in statistical fisheries stock assessment models
- (2011) R.I.C. Chris Francis CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES
- Changes in potential habitat of 147 North American breeding bird species in response to redistribution of trees and climate following predicted climate change
- (2011) Stephen N. Matthews et al. ECOGRAPHY
- Insights into the area under the receiver operating characteristic curve (AUC) as a discrimination measure in species distribution modelling
- (2011) Alberto Jiménez-Valverde GLOBAL ECOLOGY AND BIOGEOGRAPHY
- An explicit link between Gaussian fields and Gaussian Markov random fields: the stochastic partial differential equation approach
- (2011) Finn Lindgren et al. JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY
- Incorporating Spatial Structure in Stock Assessment: Movement Modeling in Marine Fish Population Dynamics
- (2011) Daniel R. Goethel et al. REVIEWS IN FISHERIES SCIENCE
- The Pace of Shifting Climate in Marine and Terrestrial Ecosystems
- (2011) M. T. Burrows et al. SCIENCE
- Rapid Range Shifts of Species Associated with High Levels of Climate Warming
- (2011) I.-C. Chen et al. SCIENCE
- A statistical explanation of MaxEnt for ecologists
- (2010) Jane Elith et al. DIVERSITY AND DISTRIBUTIONS
- Community and ecosystem responses to recent climate change
- (2010) G. R. Walther PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Why does phenology drive species distribution?
- (2010) I. Chuine PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Species Distribution Models: Ecological Explanation and Prediction Across Space and Time
- (2009) Jane Elith et al. Annual Review of Ecology Evolution and Systematics
- Notes on survey-based spatial indicators for monitoring fish populations
- (2009) Mathieu Woillez et al. AQUATIC LIVING RESOURCES
- Hierarchical models facilitate spatial analysis of large data sets: a case study on invasive plant species in the northeastern United States
- (2009) A. M. Latimer et al. ECOLOGY LETTERS
- Projecting global marine biodiversity impacts under climate change scenarios
- (2009) William W.L. Cheung et al. FISH AND FISHERIES
- Approximate Bayesian inference for latent Gaussian models by using integrated nested Laplace approximations
- (2009) Håvard Rue et al. JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY
- Near term climate projections for invasive species distributions
- (2008) Catherine S. Jarnevich et al. BIOLOGICAL INVASIONS
- A note on conditional AIC for linear mixed-effects models
- (2008) H. Liang et al. BIOMETRIKA
- A working guide to boosted regression trees
- (2008) J. Elith et al. JOURNAL OF ANIMAL ECOLOGY
- Rapid shifts in plant distribution with recent climate change
- (2008) A. E. Kelly et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationPublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More