Heterogeneity in the transcriptional response of the human pathogen Aspergillus fumigatus to the antifungal agent caspofungin

Genomic and Phenotypic Analysis of COVID-19-Associated Pulmonary Aspergillosis Isolates of Aspergillus fumigatus

(2021) Jacob L. Steenwyk et al.   Microbiology Spectrum

The cell wall integrity pathway contributes to the early stages of Aspergillus fumigatus asexual development

(2020) Marina Campos Rocha et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Scanning electron microscopy and machine learning reveal heterogeneity in capsular morphotypes of the human pathogen Cryptococcus spp.

(2020) William Lopes et al.   Scientific Reports

Genomic and Phenotypic Heterogeneity of Clinical Isolates of the Human Pathogens Aspergillus fumigatus, Aspergillus lentulus, and Aspergillus fumigatiaffinis

(2020) Renato A. C. dos Santos et al.   Frontiers in Genetics

Aspergillus fumigatus Transcription Factors Involved in the Caspofungin Paradoxical Effect

(2020) Clara Valero et al.   mBio

The Aspergillus fumigatus transcription factor RglT is important for gliotoxin biosynthesis and self-protection, and virulence

(2020) Laure N. A. Ries et al.   PLoS Pathogens

Candida albicans Genetic Background Influences Mean and Heterogeneity of Drug Responses and Genome Stability during Evolution in Fluconazole

(2020) Aleeza C. Gerstein et al.   mSphere

Fungal iron homeostasis with a focus on Aspergillus fumigatus

(2020) Matthias Misslinger et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

Variation Among Biosynthetic Gene Clusters, Secondary Metabolite Profiles, and Cards of Virulence Across Aspergillus Species

(2020) Jacob L. Steenwyk et al.   GENETICS

On the lineage of Aspergillus fumigatus isolates in common laboratory use

(2020) Margherita Bertuzzi et al.   MEDICAL MYCOLOGY

Elevated Vacuolar Uptake of Fluorescently Labeled Antifungal Drug Caspofungin Predicts Echinocandin Resistance in Pathogenic Yeast

(2020) Qais Z. Jaber et al.   ACS Central Science

On top of biosynthetic gene clusters: How epigenetic machinery influences secondary metabolism in fungi

(2019) Brandon T. Pfannenstiel et al.   BIOTECHNOLOGY ADVANCES

Link between heat shock protein 90 (Hsp90) and the mitochondrial respiratory chain in the caspofungin stress response of Aspergillus fumigatus

(2019) M Aruanno et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Circuit diversification in a biofilm regulatory network

(2019) Manning Y. Huang et al.   PLoS Pathogens

Nutritional Heterogeneity Among Aspergillus fumigatus Strains Has Consequences for Virulence in a Strain- and Host-Dependent Manner

(2019) Laure Nicolas Annick Ries et al.   Frontiers in Microbiology

Endoplasmic Reticulum Export of GPI-Anchored Proteins

(2019) Sergio Lopez et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Stress-Induced Changes in the Lipid Microenvironment of β-(1,3)-D-Glucan Synthase Cause Clinically Important Echinocandin Resistance in Aspergillus fumigatus

(2019) Shruthi Satish et al.   mBio

Aspergillus fumigatus calcium-responsive transcription factors regulate cell wall architecture promoting stress tolerance, virulence and caspofungin resistance

(2019) Patrícia Alves de Castro et al.   PLoS Genetics

Aspergillus fumigatus viability drives allergic responses to inhaled conidia

(2018) Ajay P. Nayak et al.   ANNALS OF ALLERGY ASTHMA & IMMUNOLOGY

An LaeA- and BrlA-Dependent Cellular Network Governs Tissue-Specific Secondary Metabolism in the Human Pathogen Aspergillus fumigatus

(2018) Abigail L. Lind et al.   mSphere

The birth, evolution and death of metabolic gene clusters in fungi

(2018) Antonis Rokas et al.   NATURE REVIEWS MICROBIOLOGY

Macrophages inhibit Aspergillus fumigatus germination and neutrophil-mediated fungal killing

(2018) Emily E. Rosowski et al.   PLoS Pathogens

Module-detection approaches for the integration of multilevel omics data highlight the comprehensive response of Aspergillus fumigatus to caspofungin

(2018) T. Conrad et al.   BMC Systems Biology

Invasive Fungal Infections in the Intensive Care Unit

(2017) Luis Ostrosky-Zeichner et al.   INFECTIOUS DISEASE CLINICS OF NORTH AMERICA

Invasive mould infections in the ICU setting: complexities and solutions

(2017) Matteo Bassetti et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

rtfA controls development, secondary metabolism, and virulence in Aspergillus fumigatus

(2017) Ryan R. Myers et al.   PLoS One

The Aspergillus fumigatus CrzA Transcription Factor Activates Chitin Synthase Gene Expression during the Caspofungin Paradoxical Effect

(2017) Laure Nicolas Annick Ries et al.   mBio

Heterogeneity Confounds Establishment of “a” Model Microbial Strain

(2017) Nancy P. Keller   mBio

Drivers of genetic diversity in secondary metabolic gene clusters within a fungal species

(2017) Abigail L. Lind et al.   PLOS BIOLOGY

Invasive aspergillosis in acute myeloid leukemia: Are we making progress in reducing mortality?

(2016) Giulia Dragonetti et al.   MEDICAL MYCOLOGY

TheAspergillus fumigatusconidial melanin production is regulated by the bifunctional bHLH DevR and MADS-box RlmA transcription factors

(2016) Vito Valiante et al.   MOLECULAR MICROBIOLOGY

Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

(2016) Mingxun Wang et al.   NATURE BIOTECHNOLOGY

Secondary metabolite arsenal of an opportunistic pathogenic fungus

(2016) Elaine Bignell et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Heterogeneity among Isolates Reveals that Fitness in Low Oxygen Correlates with Aspergillus fumigatus Virulence

(2016) Caitlin H. Kowalski et al.   mBio

Aspergillus fumigatus Photobiology Illuminates the Marked Heterogeneity between Isolates

(2016) Kevin K. Fuller et al.   mBio

Aspergillus fumigatus MADS-Box Transcription Factor rlmA Is Required for Regulation of the Cell Wall Integrity and Virulence

(2016) Marina Campos Rocha et al.   G3-Genes Genomes Genetics

Characterization of Aspergillus fumigatus Isolates from Air and Surfaces of the International Space Station

(2016) Benjamin P. Knox et al.   mSphere

Mechanisms of echinocandin antifungal drug resistance

(2015) David S. Perlin   Annals of the New York Academy of Sciences

The Strength of Synergistic Interaction between Posaconazole and Caspofungin Depends on the Underlying Azole Resistance Mechanism of Aspergillus fumigatus

(2015) Eleftheria Mavridou et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Aspergillus nidulans protein kinase A plays an important role in cellulase production

(2015) Leandro José de Assis et al.   Biotechnology for Biofuels

Redundant synthesis of a conidial polyketide by two distinct secondary metabolite clusters inAspergillus fumigatus

(2015) Kurt Throckmorton et al.   ENVIRONMENTAL MICROBIOLOGY

The Aspergillus fumigatus pkcAG579R Mutant Is Defective in the Activation of the Cell Wall Integrity Pathway but Is Dispensable for Virulence in a Neutropenic Mouse Infection Model

(2015) Marina Campos Rocha et al.   PLoS One

Genetic and virulence variation in an environmental population of the opportunistic pathogen Aspergillus fumigatus

(2014) F. Alshareef et al.   MICROBIOLOGY-SGM

Calcineurin-Mediated Regulation of Hyphal Growth, Septation, and Virulence in Aspergillus fumigatus

(2014) Praveen R. Juvvadi et al.   MYCOPATHOLOGIA

Fungal siderophore metabolism with a focus on Aspergillus fumigatus

(2014) Hubertus Haas   NATURAL PRODUCT REPORTS

Azole Heteroresistance in Cryptococcus neoformans: Emergence of Resistant Clones with Chromosomal Disomy in the Mouse Brain during Fluconazole Treatment

(2013) Edward Sionov et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Bimodular Peptide Synthetase SidE Produces Fumarylalanine in the Human Pathogen Aspergillus fumigatus

(2013) Wieland Steinchen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A Nonribosomal Peptide Synthetase-Derived Iron(III) Complex from the Pathogenic Fungus Aspergillus fumigatus

(2013) Wen-Bing Yin et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

The interplay between vacuolar and siderophore-mediated iron storage in Aspergillus fumigatus

(2012) Fabio Gsaller et al.   Metallomics

Reprogramming of carbon metabolism by the transcriptional activators AcuK and AcuM in Aspergillus nidulans

(2012) Yumi Suzuki et al.   MOLECULAR MICROBIOLOGY

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

MEME-ChIP: motif analysis of large DNA datasets

(2011) Philip Machanick et al.   BIOINFORMATICS

FIMO: scanning for occurrences of a given motif

(2011) Charles E. Grant et al.   BIOINFORMATICS

Regulation of Cell Wall Biogenesis inSaccharomyces cerevisiae: The Cell Wall Integrity Signaling Pathway

(2011) David E. Levin   GENETICS

The MAP kinase MpkA controls cell wall integrity, oxidative stress response, gliotoxin production and iron adaptation in Aspergillus fumigatus

(2011) Radhika Jain et al.   MOLECULAR MICROBIOLOGY

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

Mevalonate governs interdependency of ergosterol and siderophore biosyntheses in the fungal pathogen Aspergillus fumigatus

(2011) S. Yasmin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Transcriptional Regulation of Chitin Synthases by Calcineurin Controls Paradoxical Growth of Aspergillus fumigatus in Response to Caspofungin

(2010) J. R. Fortwendel et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Profiling theAspergillus fumigatusProteome in Response to Caspofungin

(2010) Steven E. Cagas et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Natural functions of mycotoxins and control of their biosynthesis in fungi

(2010) Massimo Reverberi et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

What makes Aspergillus fumigatus a successful pathogen? Genes and molecules involved in invasive aspergillosis

(2010) Ana Abad et al.   REVISTA IBEROAMERICANA DE MICOLOGIA

Self-Protection against Gliotoxin—A Component of the Gliotoxin Biosynthetic Cluster, GliT, Completely Protects Aspergillus fumigatus Against Exogenous Gliotoxin

(2010) Markus Schrettl et al.   PLoS Pathogens

The interplay between iron and zinc metabolism in Aspergillus fumigatus

(2009) Sabiha Yasmin et al.   FUNGAL GENETICS AND BIOLOGY

Functional characterization of the Aspergillus fumigatus CRZ1 homologue, CrzA

(2008) Frederico Marianetti Soriani et al.   MOLECULAR MICROBIOLOGY

Genomic Islands in the Pathogenic Filamentous Fungus Aspergillus fumigatus

(2008) Natalie D. Fedorova et al.   PLoS Genetics