Sequential colonization of oceanic archipelagos led to a species-level radiation in the common chaffinch complex (Aves: Fringilla coelebs)

Island songbirds as windows into evolution in small populations

(2021) Thibault Leroy et al.   CURRENT BIOLOGY

Chromosome-level genome assembly of the common chaffinch (Aves: Fringilla Coelebs): a valuable resource for evolutionary biology

(2021) María Recuerda et al.   Genome Biology and Evolution

Performance of a points-based scoring system for assessing species limits in birds

(2021) Joseph A Tobias et al.   AUK

An overview of speciation and species limits in birds

(2021) Kevin Winker   AUK

A simple dynamic model explains the diversity of island birds worldwide

(2020) Luis Valente et al.   NATURE

The evolutionary history and genomics of European blackcap migration

(2020) Kira Delmore et al.   eLife

Change in sexual signalling traits outruns morphological divergence across an ecological gradient in the post‐glacial radiation of the songbird genus Junco

(2020) Guillermo Friis et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

The ghost of connections past: A role for mainland vicariance in the isolation of an insular population of the red‐billed chough (Aves: Corvidae)

(2020) Francisco Morinha et al.   JOURNAL OF BIOGEOGRAPHY

Pleistocene extinctions as drivers of biogeographical patterns on the easternmost Canary Islands

(2019) Carlos García‐Verdugo et al.   JOURNAL OF BIOGEOGRAPHY

Convergent regulatory evolution and loss of flight in paleognathous birds

(2019) Timothy B. Sackton et al.   SCIENCE

BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis

(2019) Remco Bouckaert et al.   PLoS Computational Biology

Comparing Adaptive Radiations Across Space, Time, and Taxa

(2019) Rosemary G Gillespie et al.   JOURNAL OF HEREDITY

Conceptual and statistical problems with the DEC+J model of founder-event speciation and its comparison with DEC via model selection

(2018) Richard H. Ree et al.   JOURNAL OF BIOGEOGRAPHY

Genomics of Parallel Ecological Speciation in Lake Victoria Cichlids

(2018) Joana Isabel Meier et al.   MOLECULAR BIOLOGY AND EVOLUTION

RADpainter and fineRADstructure: Population Inference from RADseq Data

(2018) Milan Malinsky et al.   MOLECULAR BIOLOGY AND EVOLUTION

Bayesian Divergence-Time Estimation with Genome-Wide Single-Nucleotide Polymorphism Data of Sea Catfishes (Ariidae) Supports Miocene Closure of the Panamanian Isthmus

(2018) Madlen Stange et al.   SYSTEMATIC BIOLOGY

Differential gene regulation underlies variation in melanic plumage coloration in the dark-eyed junco (Junco hyemalis )

(2018) Mikus Abolins-Abols et al.   MOLECULAR ECOLOGY

Acoustic, genetic, and morphological analyses of the Canarian common chaffinch complex Fringilla coelebs ssp. reveals cryptic diversification

(2018) Juan Carlos Illera et al.   JOURNAL OF AVIAN BIOLOGY

A roadmap for island biology: 50 fundamental questions after 50 years of The Theory of Island Biogeography

(2017) Jairo Patiño et al.   JOURNAL OF BIOGEOGRAPHY

Island biogeography: Taking the long view of nature’s laboratories

(2017) Robert J. Whittaker et al.   SCIENCE

What are We Learning about Speciation and Extinction from the Canary Islands?

(2016) Juan Carlos Illera et al.   Ardeola-International Journal of Ornithology

Molecular Evolutionary Consequences of Island Colonization

(2016) Jennifer E. James et al.   Genome Biology and Evolution

Rapid postglacial diversification and long-term stasis within the songbird genusJunco: phylogeographic and phylogenomic evidence

(2016) Guillermo Friis et al.   MOLECULAR ECOLOGY

Predictable evolution toward flightlessness in volant island birds

(2016) Natalie A. Wright et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Islands as model systems in ecology and evolution: prospects fifty years after MacArthur-Wilson

(2015) Ben H. Warren et al.   ECOLOGY LETTERS

Integrative taxonomy reveals Europe's rarest songbird species, the Gran Canaria blue chaffinchFringilla polatzeki

(2015) George Sangster et al.   JOURNAL OF AVIAN BIOLOGY

Disentangling the complex evolutionary history of the Western Palearctic blue tits (Cyanistesspp.) - phylogenomic analyses suggest radiation by multiple colonization events and subsequent isolation

(2015) Martin Stervander et al.   MOLECULAR ECOLOGY

Clumpak : a program for identifying clustering modes and packaging population structure inferences across K

(2015) Naama M. Kopelman et al.   Molecular Ecology Resources

Evolution of Darwin’s finches and their beaks revealed by genome sequencing

(2015) Sangeet Lamichhaney et al.   NATURE

Ensembl 2016

(2015) Andrew Yates et al.   NUCLEIC ACIDS RESEARCH

Biogeography of Mediterranean Hotspot Biodiversity: Re-Evaluating the 'Tertiary Relict' Hypothesis of Macaronesian Laurel Forests

(2015) Paulina Kondraskov et al.   PLoS One

Species taxonomy of birds: Which null hypothesis?

(2014) Frank B. Gill   AUK

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Model Selection in Historical Biogeography Reveals that Founder-Event Speciation Is a Crucial Process in Island Clades

(2014) Nicholas J. Matzke   SYSTEMATIC BIOLOGY

The application of species criteria in avian taxonomy and its implications for the debate over species concepts

(2013) George Sangster   BIOLOGICAL REVIEWS

The Progressive Loss of Syntactical Structure in Bird Song along an Island Colonization Chain

(2013) Robert F. Lachlan et al.   CURRENT BIOLOGY

Genetic diversity and morphological variation of the common chaffinchFringilla coelebsin the Azores

(2013) Pedro Rodrigues et al.   JOURNAL OF AVIAN BIOLOGY

Stacks: an analysis tool set for population genomics

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

Linking environmental stress, feeding-shifts and the ‘island syndrome’: a nutritional challenge hypothesis

(2013) Guillermo Blanco et al.   POPULATION ECOLOGY

A high-performance computing toolset for relatedness and principal component analysis of SNP data

(2012) X. Zheng et al.   BIOINFORMATICS

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

Age, origins and extinctions of the avifauna of Macaronesia: a synthesis of phylogenetic and fossil information

(2012) Juan Carlos Illera et al.   QUATERNARY SCIENCE REVIEWS

Inference of Population Structure using Dense Haplotype Data

(2012) Daniel John Lawson et al.   PLoS Genetics

PGDSpider: an automated data conversion tool for connecting population genetics and genomics programs

(2011) H. E. L. Lischer et al.   BIOINFORMATICS

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Multilocus Resolution of Phylogeny and Timescale in the Extant Adaptive Radiation of Hawaiian Honeycreepers

(2011) Heather R.L. Lerner et al.   CURRENT BIOLOGY

The performance of phylogenetic algorithms in estimating haplotype genealogies with migration

(2011) WALTER SALZBURGER et al.   MOLECULAR ECOLOGY

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Rapid phenotypic evolution during incipient speciation in a continental avian radiation

(2011) L. Campagna et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Long-distance dispersal: a framework for hypothesis testing

(2011) Rosemary G. Gillespie et al.   TRENDS IN ECOLOGY & EVOLUTION

Genome-wide synteny through highly sensitive sequence alignment: Satsuma

(2010) M. G. Grabherr et al.   BIOINFORMATICS

The integrative future of taxonomy

(2010) Jose M. Padial et al.   Frontiers in Zoology

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Is it a species?

(2010) KEVIN WINKER   IBIS

Quantitative criteria for species delimitation

(2010) JOSEPH A. TOBIAS et al.   IBIS

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

(2010) LAURENT EXCOFFIER et al.   Molecular Ecology Resources

Chapter 1: Subspecies Represent Geographically Partitioned Variation, A Gold Mine of Evolutionary Biology, and a Challenge for Conservation

(2010) Kevin Winker   ORNITHOLOGICAL MONOGRAPHS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Stepping stone speciation in Hawaii’s flycatchers: molecular divergence supports new island endemics within the elepaio

(2009) Eric A. VanderWerf et al.   CONSERVATION GENETICS

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

Are the IUCN standard home-range thresholds for species a good indicator to prioritise conservation urgency in small islands? A case study in the Canary Islands (Spain)

(2009) José L. Martín   JOURNAL FOR NATURE CONSERVATION

Phylogeography and genetic structure of the Canarian common chaffinch (Fringilla coelebs) inferred with mtDNA and microsatellite loci

(2009) Nicolás M. Suárez et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Adaptation and diversification on islands

(2009) Jonathan B. Losos et al.   NATURE

Adaptive radiation, nonadaptive radiation, ecological speciation and nonecological speciation

(2009) Rebecca J. Rundell et al.   TRENDS IN ECOLOGY & EVOLUTION

A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective

(2008) M. Foll et al.   GENETICS

Inferring dispersal: a Bayesian approach to phylogeny-based island biogeography, with special reference to the Canary Islands

(2008) Isabel Sanmartín et al.   JOURNAL OF BIOGEOGRAPHY

Colonization history, ecological shifts and diversification in the evolution of endemic Galápagos weevils

(2008) A. S. SEQUEIRA et al.   MOLECULAR ECOLOGY

Ocean Surface Winds Drive Dynamics of Transoceanic Aerial Movements

(2008) Ángel M. Felicísimo et al.   PLoS One

A Rapid Bootstrap Algorithm for the RAxML Web Servers

(2008) Alexandros Stamatakis et al.   SYSTEMATIC BIOLOGY