Horizontal and vertical distribution of Gambierdiscus spp. (Dinophyceae) including novel phylotypes in Japan identified by 18S rDNA metabarcoding
出版年份 2021 全文链接
标题
Horizontal and vertical distribution of Gambierdiscus spp. (Dinophyceae) including novel phylotypes in Japan identified by 18S rDNA metabarcoding
作者
关键词
Alveolata primer, Gambierdiscus, Metabarcoding, Ciguatera poisoning, Benthic/epiphytic dinoflagellate, 18S rDNA
出版物
HARMFUL ALGAE
Volume 111, Issue -, Pages 102163
出版商
Elsevier BV
发表日期
2021-12-21
DOI
10.1016/j.hal.2021.102163
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Exploring benthic cyanobacterial diversity and co-occurring potentially harmful dinoflagellates in six islands of the South Pacific
- (2021) Laura Biessy et al. HYDROBIOLOGIA
- Climate change and harmful benthic microalgae
- (2020) Patricia A. Tester et al. HARMFUL ALGAE
- Ciguatera Fish Poisoning: The Risk from an Aotearoa/New Zealand Perspective
- (2020) Lesley L. Rhodes et al. Toxins
- Distribution of Potentially Toxic Epiphytic Dinoflagellates in Saint Martin Island (Caribbean Sea, Lesser Antilles)
- (2020) Aurélie Boisnoir et al. CRYPTOGAMIE ALGOLOGIE
- Species detection and delineation in the marine planktonic diatoms Chaetoceros and Bacteriastrum through metabarcoding: making biological sense of haplotype diversity
- (2020) Chetan C. Gaonkar et al. ENVIRONMENTAL MICROBIOLOGY
- Assessment of Ciguatera and Other Phycotoxin-Related Risks in Anaho Bay (Nuku Hiva Island, French Polynesia): Molecular, Toxicological, and Chemical Analyses of Passive Samplers
- (2020) Mélanie Roué et al. Toxins
- Genome Size, rDNA Copy, and qPCR Assays for Symbiodiniaceae
- (2020) Osama S. Saad et al. Frontiers in Microbiology
- Effects of substratum and depth on benthic harmful dinoflagellate assemblages
- (2020) Li Keat Lee et al. Scientific Reports
- Ciguatera poisonings: A global review of occurrences and trends
- (2020) M. Chinain et al. HARMFUL ALGAE
- Exploring the Role of Macroalgal Surface Metabolites on the Settlement of the Benthic Dinoflagellate Ostreopsis cf. ovata
- (2020) Eva Ternon et al. Frontiers in Marine Science
- Species-specific PCR assays for Gambierdiscus excentricus and Gambierdiscus silvae (Gonyaulacales, Dinophyceae)
- (2019) R. Wayne Litaker et al. JOURNAL OF PHYCOLOGY
- The Generic Mapping Tools Version 6
- (2019) P. Wessel et al. GEOCHEMISTRY GEOPHYSICS GEOSYSTEMS
- Growth and epiphytic behavior of three Gambierdiscus species (Dinophyceae) associated with various macroalgal substrates
- (2019) Nurin Izzati Mustapa et al. HARMFUL ALGAE
- Characterisation of Two Toxic Gambierdiscus spp. (Gonyaulacales, Dinophyceae) from the Great Barrier Reef (Australia): G. lewisii sp. nov. and G. holmesii sp. nov.
- (2019) Anna L. Kretzschmar et al. PROTIST
- Depth distribution of benthic dinoflagellates in the Caribbean Sea
- (2018) Aurélie Boisnoir et al. JOURNAL OF SEA RESEARCH
- Toxicology of Gambierdiscus spp. (Dinophyceae) from Tropical and Temperate Australian Waters
- (2018) Michaela Larsson et al. Marine Drugs
- MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms
- (2018) Sudhir Kumar et al. MOLECULAR BIOLOGY AND EVOLUTION
- dinoref : A curated dinoflagellate (Dinophyceae) reference database for the 18S rRNA gene
- (2018) Solenn Mordret et al. Molecular Ecology Resources
- The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update
- (2018) Enis Afgan et al. NUCLEIC ACIDS RESEARCH
- Growth and Toxin Production of Gambierdiscus spp. Can Be Regulated by Quorum-Sensing Bacteria
- (2018) Bo Wang et al. Toxins
- Abundance and seasonal population dynamics of the potentially ciguatera-causing dinoflagellate Gambierdiscus in Japanese coastal areas between 2007 and 2013
- (2018) Tomohiro Nishimura et al. Plankton & Benthos Research
- Gambierdiscus jejuensis sp. nov., an epiphytic dinoflagellate from the waters of Jeju Island, Korea, effect of temperature on the growth, and its global distribution
- (2018) Se Hyeon Jang et al. HARMFUL ALGAE
- Taxonomy and toxin production of Gambierdiscus carpenteri (Dinophyceae) in a tropical marine ecosystem: The first record from the Philippines
- (2018) Joshua Vacarizas et al. MARINE POLLUTION BULLETIN
- “Canary Islands (NE Atlantic) as a biodiversity ‘hotspot’ of Gambierdiscus : Implications for future trends of ciguatera in the area”
- (2017) Francisco Rodríguez et al. HARMFUL ALGAE
- 25 years of serving the community with ribosomal RNA gene reference databases and tools
- (2017) Frank Oliver Glöckner et al. JOURNAL OF BIOTECHNOLOGY
- Molecular Identification of Gambierdiscus and Fukuyoa (Dinophyceae) from Environmental Samples
- (2017) Kirsty Smith et al. Marine Drugs
- An Updated Review of Ciguatera Fish Poisoning: Clinical, Epidemiological, Environmental, and Public Health Management
- (2017) Melissa Friedman et al. Marine Drugs
- Assessment of the metabarcoding approach for community analysis of benthic-epiphytic dinoflagellates using mock communities
- (2017) Kirsty F. Smith et al. NEW ZEALAND JOURNAL OF MARINE AND FRESHWATER RESEARCH
- Sample Preservation, DNA or RNA Extraction and Data Analysis for High-Throughput Phytoplankton Community Sequencing
- (2017) Anita Mäki et al. Frontiers in Microbiology
- Ciguatoxicity of Gambierdiscus and Fukuyoa species from the Caribbean and Gulf of Mexico
- (2017) R. Wayne Litaker et al. PLoS One
- Design and Evaluation of Illumina MiSeq-Compatible, 18S rRNA Gene-Specific Primers for Improved Characterization of Mixed Phototrophic Communities
- (2016) Ian M. Bradley et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Quantitative PCR assay for detection and enumeration of ciguatera-causing dinoflagellate Gambierdiscus spp. (Gonyaulacales) in coastal areas of Japan
- (2016) Tomohiro Nishimura et al. HARMFUL ALGAE
- The effects of light intensity on the growth of Japanese Gambierdiscus spp. (Dinophyceae)
- (2016) Takamichi Yoshimatsu et al. HARMFUL ALGAE
- Temperature and salinity effects and toxicity ofGambierdiscus caribaeus(Dinophyceae) from Thailand
- (2016) Wittaya Tawong et al. PHYCOLOGIA
- Influence of Environmental Variables on Gambierdiscus spp. (Dinophyceae) Growth and Distribution
- (2016) Yixiao Xu et al. PLoS One
- Quantitative analysis of dinoflagellates and diatoms community via Miseq sequencing of actin gene and v9 region of 18S rDNA
- (2016) Liliang Guo et al. Scientific Reports
- Effects of ocean warming on growth and distribution of dinoflagellates associated with ciguatera fish poisoning in the Caribbean
- (2015) Steven R. Kibler et al. ECOLOGICAL MODELLING
- Comparative study of the validity of three regions of the 18S-rRNA gene for massively parallel sequencing-based monitoring of the planktonic eukaryote community
- (2015) Akifumi S. Tanabe et al. Molecular Ecology Resources
- Eukaryotic plankton diversity in the sunlit ocean
- (2015) C. de Vargas et al. SCIENCE
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- Ciguatera Fish Poisoning and Climate Change: Analysis of National Poison Center Data in the United States, 2001–2011
- (2014) Daniel B. Gingold et al. ENVIRONMENTAL HEALTH PERSPECTIVES
- Distribution, abundance and diversity of Gambierdiscus spp. from a ciguatera-endemic area in Marakei, Republic of Kiribati
- (2014) Yixiao Xu et al. HARMFUL ALGAE
- High abundance of the potentially maitotoxic dinoflagellate Gambierdiscus carpenteri in temperate waters of New South Wales, Australia
- (2014) Gurjeet S. Kohli et al. HARMFUL ALGAE
- Effects of temperature, salinity and their interaction on growth of Japanese Gambierdiscus spp. (Dinophyceae)
- (2014) Takamichi Yoshimatsu et al. HARMFUL ALGAE
- Morphology ofGambierdiscus scabrosussp. nov. (Gonyaulacales): a new epiphytic toxic dinoflagellate from coastal areas of Japan
- (2014) Tomohiro Nishimura et al. JOURNAL OF PHYCOLOGY
- Genus Gambierdiscus in the Canary Islands (NE Atlantic Ocean) with Description of Gambierdiscus silvae sp. nov., a New Potentially Toxic Epiphytic Benthic Dinoflagellate
- (2014) Santiago Fraga et al. PROTIST
- Cobgene pyrosequencing enables characterization of benthic dinoflagellate diversity and biogeography
- (2013) Gurjeet S. Kohli et al. ENVIRONMENTAL MICROBIOLOGY
- Gambierdiscus (Dinophyceae) species diversity in the Flower Garden Banks National Marine Sanctuary, Northern Gulf of Mexico, USA
- (2013) Patricia A. Tester et al. HARMFUL ALGAE
- Toxin Profiles in Fish Implicated in Ciguatera Fish Poisoning in Amami and Kakeroma Islands, Kagoshima Prefecture, Japan
- (2013) Kentaro YOGI et al. Food Hygiene and Safety Science
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Genetic Diversity and Distribution of the Ciguatera-Causing Dinoflagellate Gambierdiscus spp. (Dinophyceae) in Coastal Areas of Japan
- (2013) Tomohiro Nishimura et al. PLoS One
- Differences in the toxicity of six Gambierdiscus (Dinophyceae) species measured using an in vitro human erythrocyte lysis assay
- (2013) William C. Holland et al. TOXICON
- Phylogenetic analysis guided by intragenomic SSU rDNA polymorphism refines classification of “Alexandrium tamarense” species complex
- (2012) Lilibeth N. Miranda et al. HARMFUL ALGAE
- Growth of eight Gambierdiscus (Dinophyceae) species: Effects of temperature, salinity and irradiance
- (2012) Steven R. Kibler et al. HARMFUL ALGAE
- The Revised Classification of Eukaryotes
- (2012) Sina M. Adl et al. JOURNAL OF EUKARYOTIC MICROBIOLOGY
- Trends of Food Poisonings Caused by Natural Toxins in Japan, 1989–2011
- (2012) Miou TODA et al. Food Hygiene and Safety Science
- The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy
- (2012) Laure Guillou et al. NUCLEIC ACIDS RESEARCH
- CBOL Protist Working Group: Barcoding Eukaryotic Richness beyond the Animal, Plant, and Fungal Kingdoms
- (2012) Jan Pawlowski et al. PLOS BIOLOGY
- Incorporating 16S Gene Copy Number Information Improves Estimates of Microbial Diversity and Abundance
- (2012) Steven W. Kembel et al. PLoS Computational Biology
- UCHIME improves sensitivity and speed of chimera detection
- (2011) Robert C. Edgar et al. BIOINFORMATICS
- Gambierdiscus excentricus sp. nov. (Dinophyceae), a benthic toxic dinoflagellate from the Canary Islands (NE Atlantic Ocean)
- (2011) Santiago Fraga et al. HARMFUL ALGAE
- Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water
- (2010) THORSTEN STOECK et al. MOLECULAR ECOLOGY
- Genetic diversity ofGambierdiscusspp. (Gonyaulacales, Dinophyceae) in Japanese coastal areas
- (2010) Sotaro Kuno et al. PHYCOLOGICAL RESEARCH
- Global distribution of ciguatera causing dinoflagellates in the genus Gambierdiscus
- (2010) R. Wayne Litaker et al. TOXICON
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
- (2009) P. D. Schloss et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building
- (2009) M. Gouy et al. MOLECULAR BIOLOGY AND EVOLUTION
- A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes
- (2009) Linda A. Amaral-Zettler et al. PLoS One
- New Insights into the Diversity of Marine Picoeukaryotes
- (2009) Fabrice Not et al. PLoS One
- Ciguatera incidence and fish toxicity in Okinawa, Japan
- (2009) Naomasa Oshiro et al. TOXICON
- Revisiting the association between sea surface temperature and the epidemiology of fish poisoning in the South Pacific: Reassessing the link between ciguatera and climate change
- (2009) Lyndon E. Llewellyn TOXICON
- Growth and toxin production in the ciguatera-causing dinoflagellate Gambierdiscus polynesiensis (Dinophyceae) in culture
- (2009) Mireille Chinain et al. TOXICON
- The occurrence of palytoxin-like poisoning and ciguatera in parts of the main land of Japan
- (2008) SHIGETO TANIYAMA NIPPON SUISAN GAKKAISHI
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