Impacts of bio-stimulants on pyrene degradation, prokaryotic community compositions, and functions

Synergistic biodegradation of phenanthrene and fluoranthene by mixed bacterial cultures

(2019) Avani Bharatkumar Patel et al.   BIORESOURCE TECHNOLOGY

The distinct response of phenanthrene enriched bacterial consortia to different PAHs and their degradation potential: a mangrove sediment microcosm study

(2019) Manzoor Ahmad et al.   JOURNAL OF HAZARDOUS MATERIALS

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

A PAH-degrading bacterial community enriched with contaminated agricultural soil and its utility for microbial bioremediation

(2019) Chao Lu et al.   ENVIRONMENTAL POLLUTION

Can biochar and oxalic acid alleviate the toxicity stress caused by polycyclic aromatic hydrocarbons in soil microbial communities?

(2019) Xiaona Li et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Development of mixed bacterial cultures DAK11 capable for degrading mixture of polycyclic aromatic hydrocarbons (PAHs)

(2018) Avani Bharatkumar Patel et al.   BIORESOURCE TECHNOLOGY

Synergistic degradation of pyrene by five culturable bacteria in a mangrove sediment-derived bacterial consortium

(2018) Pagakrong Wanapaisan et al.   JOURNAL OF HAZARDOUS MATERIALS

Biochar accelerates PAHs biodegradation in petroleum-polluted soil by biostimulation strategy

(2018) Lulu Kong et al.   JOURNAL OF HAZARDOUS MATERIALS

16S metagenomic analysis reveals adaptability of a mixed-PAH-degrading consortium isolated from crude oil-contaminated seawater to changing environmental conditions

(2018) Chanokporn Muangchinda et al.   JOURNAL OF HAZARDOUS MATERIALS

Discordance Between Resident and Active Bacterioplankton in Free-Living and Particle-Associated Communities in Estuary Ecosystem

(2018) Jia-Ling Li et al.   MICROBIAL ECOLOGY

Effect of mixed soil microbiomes on pyrene removal and the response of the soil microorganisms

(2018) Beibei Wang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Enhanced phenanthrene degradation in river sediments using a combination of biochar and nitrate

(2018) Xunan Yang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Half-lives of PAHs and temporal microbiota changes in commonly used urban landscaping materials

(2018) Marja I. Roslund et al.   PeerJ

Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin

(2018) Nicholas A. Bokulich et al.   Microbiome

Multi-omic elucidation of aromatic catabolism in adaptively evolved Rhodococcus opacus

(2018) William R. Henson et al.   METABOLIC ENGINEERING

Comparative genomic analysis of pyrene-degrading Mycobacterium species: Genomic islands and ring-hydroxylating dioxygenases involved in pyrene degradation

(2018) Dae-Wi Kim et al.   JOURNAL OF MICROBIOLOGY

Opportunistic Bacteria Dominate the Soil Microbiome Response to Phenanthrene in a Microcosm-Based Study

(2018) Sean Storey et al.   Frontiers in Microbiology

Genome Sequence and Metabolic Analysis of a Fluoranthene-Degrading Strain Pseudomonas aeruginosa DN1

(2018) Chunqiu He et al.   Frontiers in Microbiology

Combined effects of maize straw biochar and oxalic acid on the dissipation of polycyclic aromatic hydrocarbons and microbial community structures in soil: A mechanistic study

(2018) Xiaona Li et al.   JOURNAL OF HAZARDOUS MATERIALS

Degradation of fluorene and phenanthrene in PAHs-contaminated soil using Pseudomonas and Bacillus strains isolated from oil spill sites

(2018) S. Rabodonirina et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

Response of microbial community and catabolic genes to simulated petroleum hydrocarbon spills in soils/sediments from different geographic locations

(2017) Q. Liu et al.   JOURNAL OF APPLIED MICROBIOLOGY

Insights in the regulation of the degradation of PAHs in Novosphingobium sp. HR1a and utilization of this regulatory system as a tool for the detection of PAHs

(2017) Ana Segura et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Effects of Polycyclic Aromatic Hydrocarbon Mixtures on Degradation, Gene Expression, and Metabolite Production in Four Mycobacterium Species

(2016) Christiane T. Hennessee et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Benzo(a)pyrene degradation and microbial community responses in composted soil

(2016) Fengxiao Zhu et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Degradation of phenanthrene and pyrene using genetically engineered dioxygenase producing Pseudomonas putida in soil

(2016) Gashtasb Mardani et al.   Genetika-Belgrade

Root Exudation: The Ecological Driver of Hydrocarbon Rhizoremediation

(2016) Fanny Rohrbacher et al.   Agronomy-Basel

Microbial succession in response to pollutants in batch-enrichment culture

(2016) Shuo Jiao et al.   Scientific Reports

Responses of bacterial communities in seagrass sediments to polycyclic aromatic hydrocarbon-induced stress

(2015) Juan Ling et al.   ECOTOXICOLOGY

Effect of biochar on the extractability of heavy metals (Cd, Cu, Pb, and Zn) and enzyme activity in soil

(2015) Xing Yang et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Anthropogenic impact on diazotrophic diversity in the mangrove rhizosphere revealed by nifH pyrosequencing

(2015) Hongmei Jing et al.   Frontiers in Microbiology

Cancer risk of polycyclic aromatic hydrocarbons (PAHs) in the soils from Jiaozhou Bay wetland

(2014) Wei Yang et al.   CHEMOSPHERE

Effectiveness of biostimulation through nutrient content on the bioremediation of phenanthrene contaminated soil

(2014) Roshanak Rezaei Kalantary et al.   Journal of Environmental Health Science and Engineering

Effects of three different PAHs on nitrogen-fixing bacterial diversity in mangrove sediment

(2012) Fu-Lin Sun et al.   ECOTOXICOLOGY

Root exudates affect phenanthrene biodegradation, bacterial community and functional gene expression in sand microcosms

(2011) Brice Louvel et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients

(2011) Noah Fierer et al.   ISME Journal

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Preferential degradation of aromatic hydrocarbons in kerosene by a microbial consortium

(2010) Hernando Bacosa et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Effects of soil amendment with different carbon sources and other factors on the bioremediation of an aged PAH-contaminated soil

(2009) Ying Teng et al.   BIODEGRADATION

Two novel pyrene-degrading Diaphorobacter sp. and Pseudoxanthomonas sp. isolated from soil

(2009) Piriya Klankeo et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Initial community evenness favours functionality under selective stress

(2009) Lieven Wittebolle et al.   NATURE

Bacterial metabolism of polycyclic aromatic hydrocarbons: strategies for bioremediation

(2008) Archana Chauhan et al.   INDIAN JOURNAL OF MICROBIOLOGY

Real-Time PCR quantification of PAH-ring hydroxylating dioxygenase (PAH-RHDα) genes from Gram positive and Gram negative bacteria in soil and sediment samples

(2008) Aurélie Cébron et al.   JOURNAL OF MICROBIOLOGICAL METHODS