The diversity and co-occurrence network of soil bacterial and fungal communities and their implications for a new indicator of grassland degradation

Soil bacterial communities vary with grassland degradation in the Qinghai Lake watershed

(2021) Ze Ren et al.   PLANT AND SOIL

The relationships of present vegetation, bacteria, and soil properties with soil organic matter characteristics in moist acidic tundra in Alaska

(2021) Sungjin Nam et al.   SCIENCE OF THE TOTAL ENVIRONMENT

The Response of Soil Bacterial Communities and Nitrogen Cycling to Subalpine Meadow Degradation on the Loess Plateau, China

(2020) Zhengming Luo et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Shifts of soil bacterial community along a salinity gradient in the Yellow River Delta

(2020) Qingqing Zhao et al.   LAND DEGRADATION & DEVELOPMENT

The role of root community attributes in predicting soil fungal and bacterial community patterns

(2020) Jesús López‐Angulo et al.   NEW PHYTOLOGIST

Salinity controls soil microbial community structure and function in coastal estuarine wetlands

(2020) Guangliang Zhang et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial community composition and assembly along a natural sodicity/salinity gradient in surface and subsurface soils

(2020) Jisheng Xu et al.   APPLIED SOIL ECOLOGY

Soil Salinity Drives the Distribution Patterns and Ecological Functions of Fungi in Saline-Alkali Land in the Yellow River Delta, China

(2020) Chao Yang et al.   Frontiers in Microbiology

Differential responses of soil bacteria and fungi to altered precipitation in a meadow steppe

(2020) Xuechen Yang et al.   GEODERMA

Salinity Is a Key Determinant for Soil Microbial Communities in a Desert Ecosystem

(2019) Kaoping Zhang et al.   mSystems

Grasslands-more important for ecosystem services than you might think

(2019) J. Bengtsson et al.   Ecosphere

Diversifying livestock promotes multidiversity and multifunctionality in managed grasslands

(2019) Ling Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

SOIL MICROBIAL DIVERSITY DURING 30 YEARS OF GRASSLAND RESTORATION ON THE LOESS PLATEAU: TIGHT LINKAGES WITH PLANT DIVERSITY

(2019) Yanqing Guo et al.   LAND DEGRADATION & DEVELOPMENT

Soil Abiotic Properties and Plant Functional Traits Mediate Associations Between Soil Microbial and Plant Communities During a Secondary Forest Succession on the Loess Plateau

(2019) Yongfu Chai et al.   Frontiers in Microbiology

Temperate grassland shifted from nitrogen to phosphorus limitation induced by degradation and nitrogen deposition: Evidence from soil extracellular enzyme stoichiometry

(2019) Chengcheng Dong et al.   ECOLOGICAL INDICATORS

Linking Microbial Community Structure to Trait Distributions and Functions Using Salinity as an Environmental Filter

(2019) Kristin M. Rath et al.   mBio

Does conversion from natural forest to plantation affect fungal and bacterial biodiversity, community structure, and co-occurrence networks in the organic horizon and mineral soil?

(2019) Masataka Nakayama et al.   FOREST ECOLOGY AND MANAGEMENT

Degraded patch formation significantly changed microbial community composition in alpine meadow soils

(2019) Rongxiao Che et al.   SOIL & TILLAGE RESEARCH

Soil Bacterial and Fungal Communities Exhibit Distinct Long-Term Responses to Disturbance in Temperate Forests

(2019) Ernest D. Osburn et al.   Frontiers in Microbiology

Degradation of Tibetan grasslands: Consequences for carbon and nutrient cycles

(2018) Shibin Liu et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

OUP accepted manuscript

(2018)   BIOINFORMATICS

The more-individuals hypothesis revisited: the role of community abundance in species richness regulation and the productivity-diversity relationship

(2018) David Storch et al.   ECOLOGY LETTERS

Genomic insights into the Acidobacteria reveal strategies for their success in terrestrial environments

(2018) Stephanie A. Eichorst et al.   ENVIRONMENTAL MICROBIOLOGY

Keystone taxa predict compositional change in microbial communities

(2018) Cristina M. Herren et al.   ENVIRONMENTAL MICROBIOLOGY

Keystone taxa as drivers of microbiome structure and functioning

(2018) Samiran Banerjee et al.   NATURE REVIEWS MICROBIOLOGY

Plant attributes explain the distribution of soil microbial communities in two contrasting regions of the globe

(2018) Manuel Delgado-Baquerizo et al.   NEW PHYTOLOGIST

Predicting perturbation patterns from the topology of biological networks

(2018) Marc Santolini et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rhizosheath microbial community assembly of sympatric desert speargrasses is independent of the plant host

(2018) Ramona Marasco et al.   Microbiome

Effects of 7 years experimental warming on soil bacterial and fungal community structure in the Northern Tibet alpine meadow at three elevations

(2018) Chengqun Yu et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Impact of grassland degradation on the distribution and bioavailability of soil silicon: Implications for the Si cycle in grasslands

(2018) Shilei Yang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Changes in the soil microbial communities of alpine steppe at Qinghai-Tibetan Plateau under different degradation levels

(2018) Heng Zhou et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Where less may be more: how the rare biosphere pulls ecosystems strings

(2017) Alexandre Jousset et al.   ISME Journal

Links between soil microbial communities and plant traits in a species-rich grassland under long-term climate change

(2017) Emma J. Sayer et al.   Ecology and Evolution

Microbial Community and Functional Structure Significantly Varied among Distinct Types of Paddy Soils But Responded Differently along Gradients of Soil Depth Layers

(2017) Ren Bai et al.   Frontiers in Microbiology

Changes of soil microbial community under different degraded gradients of alpine meadow

(2016) Yaoming Li et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Pyrosequencing analysis of bacterial communities in Lake Bosten, a large brackish inland lake in the arid northwest of China

(2016) Lei Zhang et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Geographic patterns of co-occurrence network topological features for soil microbiota at continental scale in eastern China

(2016) Bin Ma et al.   ISME Journal

Root exudate cocktails: the link between plant diversity and soil microorganisms?

(2016) Katja Steinauer et al.   Ecology and Evolution

Relating belowground microbial composition to the taxonomic, phylogenetic, and functional trait distributions of trees in a tropical forest

(2015) Albert Barberán et al.   ECOLOGY LETTERS

A widespread plant-fungal-bacterial symbiosis promotes plant biodiversity, plant nutrition and seedling recruitment

(2015) Marcel GA van der Heijden et al.   ISME Journal

Impacts of grazing by different large herbivores in grassland depend on plant species diversity

(2015) Jun Liu et al.   JOURNAL OF APPLIED ECOLOGY

Soil properties, bacterial community composition, and metabolic diversity responses to soil salinization of a semiarid grassland in northeast China

(2015) Y. Zhang et al.   JOURNAL OF SOIL AND WATER CONSERVATION

Microbial and Enzyme Activities of Saline and Sodic Soils

(2015) Kripal Singh   LAND DEGRADATION & DEVELOPMENT

Disentangling mechanisms that mediate the balance between stochastic and deterministic processes in microbial succession

(2015) Francisco Dini-Andreote et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Differential responses of total and active soil microbial communities to long-term experimental N deposition

(2015) Zachary B. Freedman et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil Microbial Responses to Increased Moisture and Organic Resources along a Salinity Gradient in a Polar Desert

(2014) David J. Van Horn et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Biogeographic patterns in below-ground diversity in New York City's Central Park are similar to those observed globally

(2014) K. S. Ramirez et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Above- and Belowground Response along Degradation Gradient in an Alpine Grassland of the Qinghai-Tibetan Plateau

(2013) Gao-Lin Wu et al.   CLEAN-Soil Air Water

Leaf-inhabiting endophytic fungi of European Beech (Fagus sylvatica L.) co-occur in leaf litter but are rare on decaying wood of the same host

(2013) Martin Unterseher et al.   FUNGAL DIVERSITY

Temporal metatranscriptomic patterning in phototrophic Chloroflexi inhabiting a microbial mat in a geothermal spring

(2013) Christian G Klatt et al.   ISME Journal

Habitat degradation impacts black howler monkey (Alouatta pigra) gastrointestinal microbiomes

(2013) Katherine R Amato et al.   ISME Journal

Microbial abundance and composition influence litter decomposition response to environmental change

(2012) Steven D. Allison et al.   ECOLOGY

Abiotic drivers and plant traits explain landscape-scale patterns in soil microbial communities

(2012) Franciska T. de Vries et al.   ECOLOGY LETTERS

Changes of soil physico-chemical properties and enzyme activities in relation to grassland salinization

(2012) Chengchen Pan et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Beyond biogeographic patterns: processes shaping the microbial landscape

(2012) China A. Hanson et al.   NATURE REVIEWS MICROBIOLOGY

Microbial interactions: from networks to models

(2012) Karoline Faust et al.   NATURE REVIEWS MICROBIOLOGY

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Microbial diversity of active layer and permafrost in an acidic wetland from the Canadian High Arctic

(2011) Roland C. Wilhelm et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Linking vegetation change, carbon sequestration and biodiversity: insights from island ecosystems in a long-term natural experiment

(2011) David A. Wardle et al.   JOURNAL OF ECOLOGY

Microbial seed banks: the ecological and evolutionary implications of dormancy

(2011) Jay T. Lennon et al.   NATURE REVIEWS MICROBIOLOGY

Evolutionary ecology of plant-microbe interactions: soil microbial structure alters selection on plant traits

(2011) Jennifer A. Lau et al.   NEW PHYTOLOGIST

The extent of drying influences the flush of respiration after rewetting in non-saline and saline soils

(2011) Nasrin Chowdhury et al.   SOIL BIOLOGY & BIOCHEMISTRY

A ‘rare biosphere’ microorganism contributes to sulfate reduction in a peatland

(2010) Michael Pester et al.   ISME Journal

Soil bacterial and fungal communities across a pH gradient in an arable soil

(2010) Johannes Rousk et al.   ISME Journal

Direct and indirect effects of tree diversity drive soil microbial diversity in temperate deciduous forest

(2010) Carolin Thoms et al.   SOIL BIOLOGY & BIOCHEMISTRY

Shifts in bacterial community structure associated with inputs of low molecular weight carbon compounds to soil

(2010) Kathryn G. Eilers et al.   SOIL BIOLOGY & BIOCHEMISTRY

Modelling C and N mineralisation in soil food webs during secondary succession on ex-arable land

(2010) Remko Holtkamp et al.   SOIL BIOLOGY & BIOCHEMISTRY

Rangeland degradation on the Qinghai-Tibetan plateau: A review of the evidence of its magnitude and causes

(2009) R.B. Harris   JOURNAL OF ARID ENVIRONMENTS

The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems

(2008) Marcel G. A. van der Heijden et al.   ECOLOGY LETTERS

Ecology of meadow steppe in northeast China

(2008) D. Wang et al.   RANGELAND JOURNAL