Genome-wide association study reveals genetic variations associated with ocean acidification resilience in Yesso scallop Patinopecten yessoensis

Structure and functional analysis reveal an important regulated role of arginine kinase in Patinopecten yessoensis under low pH stress

(2020) Zujing Yang et al.   AQUATIC TOXICOLOGY

Regulation of ion transport and energy metabolism enables certain coral genotypes to maintain calcification under experimental ocean acidification

(2020) Amanda Glazier et al.   MOLECULAR ECOLOGY

Selective breeding of edible bivalves and its implication of global climate change

(2020) Karsoon Tan et al.   Reviews in Aquaculture

Ocean acidification induces distinct transcriptomic responses across life history stages of the sea urchin Heliocidaris erythrogramma

(2020) Hannah R. Devens et al.   MOLECULAR ECOLOGY

Impact of Ocean Acidification on the Energy Metabolism and Antioxidant Responses of the Yesso Scallop (Patinopecten yessoensis)

(2019) Huan Liao et al.   Frontiers in Physiology

Impacts of ocean acidification on carboxylated carbon nanotube effects induced in the clam species Ruditapes philippinarum

(2019) Lucia De Marchi et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Sirtuins as regulators of the cellular stress response and metabolism in marine ectotherms

(2019) M. Christina Vasquez et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Genome-Wide Association Mapping and Gene Expression Analyses Reveal Genetic Mechanisms of Disease Resistance Variations in Cynoglossus semilaevis

(2019) Qian Zhou et al.   Frontiers in Genetics

Alternative splicing, spatiotemporal expression of TEP family genes in Yesso scallop (Patinopecten yessoensis) and their disparity in responses to ocean acidification

(2019) Qiang Xing et al.   FISH & SHELLFISH IMMUNOLOGY

Standing genetic variation fuels rapid adaptation to ocean acidification

(2019) M. C. Bitter et al.   Nature Communications

Sand smelt ability to cope and recover from ocean's elevated CO 2 levels

(2018) Cátia S.E. Silva et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Effects of carbamazepine and cetirizine under an ocean acidification scenario on the biochemical and transcriptome responses of the clam Ruditapes philippinarum

(2018) Ângela Almeida et al.   ENVIRONMENTAL POLLUTION

Differential Expression of Synapsin I and II upon Treatment by Lithium and Valproic Acid in Various Brain Regions

(2018) Hetshree Joshi et al.   INTERNATIONAL JOURNAL OF NEUROPSYCHOPHARMACOLOGY

CO 2 -induced ocean acidification impairs the immune function of the Pacific oyster against Vibrio splendidus challenge: An integrated study from a cellular and proteomic perspective

(2018) Ruiwen Cao et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Population resequencing reveals candidate genes associated with salinity adaptation of the Pacific oyster Crassostrea gigas

(2018) Zhicai She et al.   Scientific Reports

PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format files

(2018) Chi Zhang et al.   BIOINFORMATICS

Transcriptomic and metabolic response to chronic and acute thermal exposure of juvenile geoduck clams Panopea globosa

(2018) Oscar E. Juárez et al.   Marine Genomics

Benzo[a]pyrene exposure under future ocean acidification scenarios weakens the immune responses of blood clam, Tegillarca granosa

(2017) Wenhao Su et al.   FISH & SHELLFISH IMMUNOLOGY

Genome-Wide Association Study Reveals Multiple Novel QTL Associated with Low Oxygen Tolerance in Hybrid Catfish

(2017) Xiaoxiao Zhong et al.   MARINE BIOTECHNOLOGY

Ocean acidification adversely influences metabolism, extracellular pH and calcification of an economically important marine bivalve, Tegillarca granosa

(2017) Xinguo Zhao et al.   MARINE ENVIRONMENTAL RESEARCH

Naturally acidified habitat selects for ocean acidification–tolerant mussels

(2017) Jörn Thomsen et al.   Science Advances

Scallop genome provides insights into evolution of bilaterian karyotype and development

(2017) Shi Wang et al.   Nature Ecology & Evolution

Benzo[a]pyrene-induced metabolic shift from glycolysis to pentose phosphate pathway in the human bladder cancer cell line RT4

(2017) Nisha Verma et al.   Scientific Reports

A genome-wide association study of heat stress-associated SNPs in catfish

(2016) Y. Jin et al.   ANIMAL GENETICS

Ocean acidification weakens the immune response of blood clam through hampering the NF-kappa β and toll-like receptor pathways

(2016) Saixi Liu et al.   FISH & SHELLFISH IMMUNOLOGY

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Transcriptome and biomineralization responses of the pearl oyster Pinctada fucata to elevated CO2 and temperature

(2016) Shiguo Li et al.   Scientific Reports

Serotonin receptor modulators in the treatment of irritable bowel syndrome

(2016) Jeffrey Lackner   Therapeutics and Clinical Risk Management

Key metabolic pathways involved in xenobiotic biotransformation and stress responses revealed by transcriptomics of the mangrove oyster Crassostrea brasiliana

(2015) Karim H. Lüchmann et al.   AQUATIC TOXICOLOGY

Synapsin Isoforms and Synaptic Vesicle Trafficking

(2015)   MOLECULES AND CELLS

Quantitative flux analysis reveals folate-dependent NADPH production

(2014) Jing Fan et al.   NATURE

Impacts of ocean acidification on marine organisms: quantifying sensitivities and interaction with warming

(2013) Kristy J. Kroeker et al.   GLOBAL CHANGE BIOLOGY

Cell signalling mechanisms for insect stress tolerance

(2013) S. A. Davies et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

The advantages and limitations of trait analysis with GWAS: a review

(2013) Arthur Korte et al.   Plant Methods

RADtyping: An Integrated Package for Accurate De Novo Codominant and Dominant RAD Genotyping in Mapping Populations

(2013) Xiaoteng Fu et al.   PLoS One

2b-RAD: a simple and flexible method for genome-wide genotyping

(2012) Shi Wang et al.   NATURE METHODS

PGDSpider: an automated data conversion tool for connecting population genetics and genomics programs

(2011) H. E. L. Lischer et al.   BIOINFORMATICS

CO2 induced seawater acidification impacts sea urchin larval development I: Elevated metabolic rates decrease scope for growth and induce developmental delay

(2011) M. Stumpp et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Adult exposure influences offspring response to ocean acidification in oysters

(2011) Laura M. Parker et al.   GLOBAL CHANGE BIOLOGY

Rings of Charge within the Extracellular Vestibule Influence Ion Permeation of the 5-HT3A Receptor

(2011) Matthew R. Livesey et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Chronic stress and antidepressant agomelatine induce region-specific changes in synapsin I expression in the rat brain

(2011) Girstaute Dagyte et al.   JOURNAL OF NEUROSCIENCE RESEARCH

Insights into shell deposition in the Antarctic bivalve Laternula elliptica: gene discovery in the mantle transcriptome using 454 pyrosequencing

(2010) Melody S Clark et al.   BMC GENOMICS

Comparing the effect of elevated pCO2 and temperature on the fertilization and early development of two species of oysters

(2010) Laura M. Parker et al.   MARINE BIOLOGY

Size-dependent pH effect on calcification in post-larval hard clam Mercenaria spp.

(2010) GG Waldbusser et al.   MARINE ECOLOGY PROGRESS SERIES

Genome-wide association studies of 14 agronomic traits in rice landraces

(2010) Xuehui Huang et al.   NATURE GENETICS

The synapsins: Key actors of synapse function and plasticity

(2010) F. Cesca et al.   PROGRESS IN NEUROBIOLOGY

SOAP2: an improved ultrafast tool for short read alignment

(2009) R. Li et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Acid–base regulatory ability of the cephalopod (Sepia officinalis) in response to environmental hypercapnia

(2009) Magdalena A. Gutowska et al.   JOURNAL OF COMPARATIVE PHYSIOLOGY B-BIOCHEMICAL SYSTEMIC AND ENVIRONMENTAL PHYSIOLOGY

Early Larval Development of the Sydney Rock OysterSaccostrea glomerataUnder Near-Future Predictions of CO2-Driven Ocean Acidification

(2009) Sue-Ann Watson et al.   JOURNAL OF SHELLFISH RESEARCH

The genetics of quantitative traits: challenges and prospects

(2009) Trudy F. C. Mackay et al.   NATURE REVIEWS GENETICS

A dual role of 5-hydroxytryptamine receptor 3 in serotonin induced ion transport in rat distal colon

(2008) Ning Yang et al.   EUROPEAN JOURNAL OF PHARMACOLOGY