标题
Closely related Lak megaphages replicate in the microbiomes of diverse animals
作者
关键词
-
出版物
iScience
Volume 24, Issue 8, Pages 102875
出版商
Elsevier BV
发表日期
2021-07-16
DOI
10.1016/j.isci.2021.102875
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Massive expansion of human gut bacteriophage diversity
- (2021) Luis F. Camarillo-Guerrero et al. CELL
- The human virome: assembly, composition and host interactions
- (2021) Guanxiang Liang et al. NATURE REVIEWS MICROBIOLOGY
- Thousands of previously unknown phages discovered in whole-community human gut metagenomes
- (2021) Sean Benler et al. Microbiome
- IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era
- (2020) Bui Quang Minh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Clades of huge phages from across Earth’s ecosystems
- (2020) Basem Al-Shayeb et al. NATURE
- Metagenomic Characterization of Intestinal Regions in Pigs With Contrasting Feed Efficiency
- (2020) Jianping Quan et al. Frontiers in Microbiology
- Rapid Reconstitution of the Faecal Microbiome after Extended Diet-Induced Changes Indicate a Stable Gut Microbiome in Healthy Adult Dogs
- (2020) David Allaway et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Accurate and complete genomes from metagenomes
- (2020) Lin-Xing Chen et al. GENOME RESEARCH
- The Spatial Heterogeneity of the Gut Limits Predation and Fosters Coexistence of Bacteria and Bacteriophages
- (2020) Marta Lourenço et al. Cell Host & Microbe
- Abortive Infection: Bacterial Suicide as an Antiviral Immune Strategy
- (2020) Anna Lopatina et al. Annual Review of Virology
- VIBRANT: automated recovery, annotation and curation of microbial viruses, and evaluation of viral community function from genomic sequences
- (2020) Kristopher Kieft et al. Microbiome
- Severe preeclampsia is associated with a higher relative abundance of Prevotella bivia in the vaginal microbiota
- (2020) Chia-Ying Lin et al. Scientific Reports
- Fecal Microbiota Characterization of Seychelles Giant Tortoises (Aldabrachelys gigantea) Living in Both Wild and Controlled Environments
- (2020) Camillo Sandri et al. Frontiers in Microbiology
- Prevotella in Pigs: The Positive and Negative Associations with Production and Health
- (2020) Samat Amat et al. Microorganisms
- Extensive Unexplored Human Microbiome Diversity Revealed by Over 150,000 Genomes from Metagenomes Spanning Age, Geography, and Lifestyle
- (2019) Edoardo Pasolli et al. CELL
- Megaphages infect Prevotella and variants are widespread in gut microbiomes
- (2019) Audra E. Devoto et al. Nature Microbiology
- Gardnerella vaginalis and Prevotella bivia Trigger Distinct and Overlapping Phenotypes in a Mouse Model of Bacterial Vaginosis
- (2019) Nicole M Gilbert et al. JOURNAL OF INFECTIOUS DISEASES
- Prevotella copri in individuals at risk for rheumatoid arthritis
- (2019) Deshire Alpizar-Rodriguez et al. ANNALS OF THE RHEUMATIC DISEASES
- Candidate Phyla Radiation Roizmanbacteria From Hot Springs Have Novel and Unexpectedly Abundant CRISPR-Cas Systems
- (2019) Lin-Xing Chen et al. Frontiers in Microbiology
- Crude fiber modulates the fecal microbiome and steroid hormones in pregnant Meishan sows
- (2019) Xueyuan Jiang et al. GENERAL AND COMPARATIVE ENDOCRINOLOGY
- The Prevotella copri Complex Comprises Four Distinct Clades Underrepresented in Westernized Populations
- (2019) Adrian Tett et al. Cell Host & Microbe
- The distinction of CPR bacteria from other bacteria based on protein family content
- (2019) Raphaël Méheust et al. Nature Communications
- MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms
- (2018) Sudhir Kumar et al. MOLECULAR BIOLOGY AND EVOLUTION
- Comparative biogeography of the gut microbiome between Jinhua and Landrace pigs
- (2018) Yingping Xiao et al. Scientific Reports
- Abundance and diversity of the faecal resistome in slaughter pigs and broilers in nine European countries
- (2018) Patrick Munk et al. Nature Microbiology
- MMseqs2 enables sensitive protein sequence searching for the analysis of massive data sets
- (2017) Martin Steinegger et al. NATURE BIOTECHNOLOGY
- Metagenomic Analysis of Cecal Microbiome Identified Microbiota and Functional Capacities Associated with Feed Efficiency in Landrace Finishing Pigs
- (2017) Zhen Tan et al. Frontiers in Microbiology
- Evidence of the Immune Relevance of Prevotella copri , a Gut Microbe, in Patients With Rheumatoid Arthritis
- (2017) Annalisa Pianta et al. Arthritis & Rheumatology
- VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data
- (2017) Jie Ren et al. Microbiome
- Fiber-utilizing capacity varies in Prevotella- versus Bacteroides-dominated gut microbiota
- (2017) Tingting Chen et al. Scientific Reports
- Phylogenetic network analysis applied to pig gut microbiota identifies an ecosystem structure linked with growth traits
- (2016) Yuliaxis Ramayo-Caldas et al. ISME Journal
- Prevotella in the gut: choose carefully
- (2016) Ruth E. Ley Nature Reviews Gastroenterology & Hepatology
- KEGG: new perspectives on genomes, pathways, diseases and drugs
- (2016) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- Uncovering the composition of microbial community structure and metagenomics among three gut locations in pigs with distinct fatness
- (2016) Hui Yang et al. Scientific Reports
- Interpreting Prevotella and Bacteroides as biomarkers of diet and lifestyle
- (2016) Anastassia Gorvitovskaia et al. Microbiome
- A reference gene catalogue of the pig gut microbiome
- (2016) Liang Xiao et al. Nature Microbiology
- MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
- (2015) Dinghua Li et al. BIOINFORMATICS
- Kinship, inbreeding and fine-scale spatial structure influence gut microbiota in a hindgut-fermenting tortoise
- (2015) Michael L. Yuan et al. MOLECULAR ECOLOGY
- Subdiffusive motion of bacteriophage in mucosal surfaces increases the frequency of bacterial encounters
- (2015) Jeremy J. Barr et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Early-life establishment of the swine gut microbiome and impact on host phenotypes
- (2015) Núria Mach et al. Environmental Microbiology Reports
- VirSorter: mining viral signal from microbial genomic data
- (2015) Simon Roux et al. PeerJ
- Bacteria, phages and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations
- (2014) Torey Looft et al. ISME Journal
- Assessment of fecal bacterial diversity among healthy piglets during the weaning transition
- (2014) Edward Alain B. Pajarillo et al. JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY
- Stop codon reassignments in the wild
- (2014) N. N. Ivanova et al. SCIENCE
- Diet, microbiota, and microbial metabolites in colon cancer risk in rural Africans and African Americans
- (2013) Junhai Ou et al. AMERICAN JOURNAL OF CLINICAL NUTRITION
- Prevotella intermedia Induces Severe Bacteremic Pneumococcal Pneumonia in Mice with Upregulated Platelet-Activating Factor Receptor Expression
- (2013) Kentaro Nagaoka et al. INFECTION AND IMMUNITY
- Mode of Delivery and Early Nutrition Modulate Microbial Colonization and Fermentation Products in Neonatal Piglets
- (2013) Mei Wang et al. JOURNAL OF NUTRITION
- Bacteriophage adhering to mucus provide a non-host-derived immunity
- (2013) J. J. Barr et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Expansion of intestinal Prevotella copri correlates with enhanced susceptibility to arthritis
- (2013) Jose U Scher et al. eLife
- Inclusion of Chicory (Cichorium intybus L.) in Pigs' Diets Affects the Intestinal Microenvironment and the Gut Microbiota
- (2012) Haoyu Liu et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
- (2012) Y. Peng et al. BIOINFORMATICS
- Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction
- (2012) Jian Ye et al. BMC BIOINFORMATICS
- Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization
- (2012) I. Sharon et al. GENOME RESEARCH
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- The intestinal microbiome of the pig
- (2012) Richard Isaacson et al. ANIMAL HEALTH RESEARCH REVIEWS
- HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment
- (2011) Michael Remmert et al. NATURE METHODS
- Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes
- (2011) G. D. Wu et al. SCIENCE
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- Prodigal: prokaryotic gene recognition and translation initiation site identification
- (2010) Doug Hyatt et al. BMC BIOINFORMATICS
- New insights intoPrevotelladiversity and medical microbiology
- (2010) Corentine Alauzet et al. Future Microbiology
- Quantitative PCR Assessments of Bacterial Species in Women with and without Bacterial Vaginosis
- (2010) M. Zozaya-Hinchliffe et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa
- (2010) C. De Filippo et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Relative contribution of Prevotella intermedia and Pseudomonas aeruginosa to lung pathology in airways of patients with cystic fibrosis
- (2010) M. Ulrich et al. THORAX
- trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
- (2009) S. Capella-Gutierrez et al. BIOINFORMATICS
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search