Integrated analysis of Xist upregulation and X-chromosome inactivation with single-cell and single-allele resolution
出版年份 2021 全文链接
标题
Integrated analysis of Xist upregulation and X-chromosome inactivation with single-cell and single-allele resolution
作者
关键词
-
出版物
Nature Communications
Volume 12, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2021-06-15
DOI
10.1038/s41467-021-23643-6
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Dosage Sensing, Threshold Responses, and Epigenetic Memory: A Systems Biology Perspective on Random X‐Chromosome Inactivation
- (2020) Verena Mutzel et al. BIOESSAYS
- Progress toward understanding chromosome silencing by Xist RNA
- (2020) Neil Brockdorff et al. GENES & DEVELOPMENT
- X-Chromosome Dosage Modulates Multiple Molecular and Cellular Properties of Mouse Pluripotent Stem Cells Independently of Global DNA Methylation Levels
- (2019) Juan Song et al. Stem Cell Reports
- Single-Cell RNA-Seq Reveals Cellular Heterogeneity of Pluripotency Transition and X Chromosome Dynamics during Early Mouse Development
- (2019) Shangli Cheng et al. Cell Reports
- A symmetric toggle switch explains the onset of random X inactivation in different mammals
- (2019) Verena Mutzel et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Kinetics of Xist-induced gene silencing can be predicted from combinations of epigenetic and genomic features
- (2019) Lisa Barros de Andrade e Sousa et al. GENOME RESEARCH
- The diverse roles of DNA methylation in mammalian development and disease
- (2019) Maxim V. C. Greenberg et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- The Complexity of PRC2 Subcomplexes
- (2019) Guido van Mierlo et al. TRENDS IN CELL BIOLOGY
- X-chromosome upregulation is driven by increased burst frequency
- (2019) Anton J. M. Larsson et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Nanog regulates Pou3f1 expression at the exit from pluripotency during gastrulation
- (2019) Antonio Barral et al. Biology Open
- Exit from Naive Pluripotency Induces a Transient X Chromosome Inactivation-like State in Males
- (2018) Elsa J. Sousa et al. Cell Stem Cell
- RNA velocity of single cells
- (2018) Gioele La Manno et al. NATURE
- Aligning Single-Cell Developmental and Reprogramming Trajectories Identifies Molecular Determinants of Myogenic Reprogramming Outcome
- (2018) Davide Cacchiarelli et al. Cell Systems
- The Implication of Early Chromatin Changes in X Chromosome Inactivation
- (2018) Jan Jakub Żylicz et al. CELL
- Sex Chromosome Effects on Male–Female Differences in Mammals
- (2018) Daniel M. Snell et al. CURRENT BIOLOGY
- Extensive cellular heterogeneity of X inactivation revealed by single-cell allele-specific expression in human fibroblasts
- (2018) Marco Garieri et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- REX1 is the critical target of RNF12 in imprinted X chromosome inactivation in mice
- (2018) Cristina Gontan et al. Nature Communications
- Comparative Analysis of Single-Cell RNA Sequencing Methods
- (2017) Christoph Ziegenhain et al. MOLECULAR CELL
- Landscape of X chromosome inactivation across human tissues
- (2017) Taru Tukiainen et al. NATURE
- Single-cell mRNA quantification and differential analysis with Census
- (2017) Xiaojie Qiu et al. NATURE METHODS
- Reversed graph embedding resolves complex single-cell trajectories
- (2017) Xiaojie Qiu et al. NATURE METHODS
- Xist-dependent imprinted X inactivation and the early developmental consequences of its failure
- (2017) Maud Borensztein et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Contribution of epigenetic landscapes and transcription factors to X-chromosome reactivation in the inner cell mass
- (2017) Maud Borensztein et al. Nature Communications
- Xist-dependent imprinted X inactivation and the early developmental consequences of its failure
- (2017) Maud Borensztein et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Single-Cell Landscape of Transcriptional Heterogeneity and Cell Fate Decisions during Mouse Early Gastrulation
- (2017) Hisham Mohammed et al. Cell Reports
- Single-Cell RNA-Seq Reveals Lineage and X Chromosome Dynamics in Human Preimplantation Embryos
- (2016) Sophie Petropoulos et al. CELL
- Single-cell analyses of X Chromosome inactivation dynamics and pluripotency during differentiation
- (2016) Geng Chen et al. GENOME RESEARCH
- Have humans lost control: The elusive X-controlling element
- (2016) Samantha B. Peeters et al. SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY
- Dosage compensation of the sex chromosomes and autosomes
- (2016) Christine M. Disteche SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY
- Escape Artists of the X Chromosome
- (2016) Bradley P. Balaton et al. TRENDS IN GENETICS
- Regulation of X-linked gene expression during early mouse development by Rlim
- (2016) Feng Wang et al. eLife
- Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets
- (2015) Evan Z. Macosko et al. CELL
- Single Cell RNA-Sequencing of Pluripotent States Unlocks Modular Transcriptional Variation
- (2015) Aleksandra A. Kolodziejczyk et al. Cell Stem Cell
- X-chromosome inactivation: new insights into cis and trans regulation
- (2015) Rafael Galupa et al. CURRENT OPINION IN GENETICS & DEVELOPMENT
- The Nature of Embryonic Stem Cells
- (2014) Graziano Martello et al. Annual Review of Cell and Developmental Biology
- The Two Active X Chromosomes in Female ESCs Block Exit from the Pluripotent State by Modulating the ESC Signaling Network
- (2014) Edda G. Schulz et al. Cell Stem Cell
- Pim kinases in hematological malignancies: where are we now and where are we going?
- (2014) Patrizia Mondello et al. Journal of Hematology & Oncology
- The Trans-Activator RNF12 and Cis-Acting Elements Effectuate X Chromosome Inactivation Independent of X-Pairing
- (2014) Tahsin Stefan Barakat et al. MOLECULAR CELL
- The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells
- (2014) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- Live Cell Imaging of the Nascent Inactive X Chromosome during the Early Differentiation Process of Naive ES Cells towards Epiblast Stem Cells
- (2014) Aurélia Guyochin et al. PLoS One
- featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
- (2013) Y. Liao et al. BIOINFORMATICS
- Genome engineering using the CRISPR-Cas9 system
- (2013) F Ann Ran et al. Nature Protocols
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- Epiblast Stem Cell-Based System Reveals Reprogramming Synergy of Germline Factors
- (2012) Astrid Gillich et al. Cell Stem Cell
- RNF12 initiates X-chromosome inactivation by targeting REX1 for degradation
- (2012) Cristina Gontan et al. NATURE
- Molecular coupling of Tsix regulation and pluripotency
- (2010) Pablo Navarro et al. NATURE
- A scaling normalization method for differential expression analysis of RNA-seq data
- (2010) Mark D Robinson et al. GENOME BIOLOGY
- RNF12 Is an X-Encoded Dose-Dependent Activator of X Chromosome Inactivation
- (2009) Iris Jonkers et al. CELL
- The pluripotency factor Oct4 interacts with Ctcf and also controls X-chromosome pairing and counting
- (2009) Mary E. Donohoe et al. NATURE
- X Inactivation Counting and Choice Is a Stochastic Process: Evidence for Involvement of an X-Linked Activator
- (2008) Kim Monkhorst et al. CELL
- Molecular Coupling of Xist Regulation and Pluripotency
- (2008) P. Navarro et al. SCIENCE
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now