Evidence for the polyphyly of Encoelia and Encoelioideae with reconsideration of respective families in Leotiomycetes

A comparison of the community diversity of foliar fungal endophytes between seedling and adult loblolly pines ( Pinus taeda )

(2015) Ryoko Oono et al.   Fungal Biology

How many fungi make sclerotia?

(2015) Matthew E. Smith et al.   Fungal Ecology

Taxonomic position of the genus Bicornispora and the appearance of a new species Bicornispora seditiosa

(2015) Ricardo Galán et al.   MYCOLOGIA

Macroskyttea parmotrematis gen. et sp. nov. (Helotiales, Leotiomycetes, Ascomycota), a new lichenicolous fungus from Bolivia

(2015) Javier Etayo et al.   Phytotaxa

Morphological and molecular characterization of the two known North American Chlorociboria species and their anamorphs

(2014) Daniela Tudor et al.   Fungal Biology

Multiple origin of the lichenicolous life habit in Helotiales, based on nuclear ribosomal sequences

(2014) Ave Suija et al.   FUNGAL DIVERSITY

Ultrastructure of the ascus apical apparatus of Encoelia furfuracea (Helotiales)

(2014) Kadri Pärtel   MYCOLOGICAL PROGRESS

A polyphasic taxonomy of Daldinia (Xylariaceae)1

(2014) Marc Stadler et al.   STUDIES IN MYCOLOGY

The phylogenetic relationships of Torrendiella and Hymenotorrendiella gen. nov. within the Leotiomycetes

(2014) Peter Johnston et al.   Phytotaxa

recommendations on generic names competing for use in Leotiomycetes (Ascomycota)

(2014) Peter R. Johnston et al.   IMA Fungus

Phacidium and Ceuthospora (Phacidiaceae) are congeneric: taxonomic and nomenclatural implications

(2014) Pedro W. Crous et al.   IMA Fungus

Diversity of fungi associated with hair roots of ericaceous plants is affected by land use

(2013) Christina Hazard et al.   FEMS MICROBIOLOGY ECOLOGY

The molecular phylogeny of aquatic hyphomycetes with affinity to the Leotiomycetes

(2013) Christiane Baschien et al.   Fungal Biology

Phylogenetic reassessment of Hyaloscyphaceae sensu lato (Helotiales, Leotiomycetes) based on multigene analyses

(2013) Jae-Gu Han et al.   Fungal Biology

Endophytes versus biotrophic and necrotrophic pathogens—are fungal lifestyles evolutionarily stable traits?

(2013) Luis Delaye et al.   FUNGAL DIVERSITY

Molecular phylogeny, morphology, pigment chemistry and ecology in Hygrophoraceae (Agaricales)

(2013) D. Jean Lodge et al.   FUNGAL DIVERSITY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

Community composition of root-associated fungi in aQuercus-dominated temperate forest: “codominance” of mycorrhizal and root-endophytic fungi

(2013) Hirokazu Toju et al.   Ecology and Evolution

Surprising spectra of root-associated fungi in submerged aquatic plants

(2012) Petr Kohout et al.   FEMS MICROBIOLOGY ECOLOGY

A diverse fungal community associated with Pseudorchis albida (Orchidaceae) roots

(2012) Petr Kohout et al.   Fungal Ecology

Evidence for a Common Toolbox Based on Necrotrophy in a Fungal Lineage Spanning Necrotrophs, Biotrophs, Endophytes, Host Generalists and Specialists

(2012) Marion Andrew et al.   PLoS One

Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi

(2012) C. L. Schoch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A monograph of Allantonectria, Nectria, and Pleonectria (Nectriaceae, Hypocreales, Ascomycota) and their pycnidial, sporodochial, and synnematous anamorphs

(2012) Y. Hirooka et al.   STUDIES IN MYCOLOGY

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Hidden Fungi, Emergent Properties: Endophytes and Microbiomes

(2011) Andrea Porras-Alfaro et al.   Annual Review of Phytopathology

The new hyphomycete genera Brachyalara and Infundichalara, the similar Exochalara and species of ‘Phialophora sect. Catenulatae’ (Leotiomycetes)

(2011) Martina Réblová et al.   FUNGAL DIVERSITY

Host Associations Between Fungal Root Endophytes and Boreal Trees

(2011) Gavin Kernaghan et al.   MICROBIAL ECOLOGY

Molecular phylogeny reveals a core clade of Rhytismatales

(2011) H. Lantz et al.   MYCOLOGIA

Diverse Helotiales associated with the roots of three species of Arctic Ericaceae provide no evidence for host specificity

(2011) John F. Walker et al.   NEW PHYTOLOGIST

PlutoF—a Web Based Workbench for Ecological and Taxonomic Research, with an Online Implementation for Fungal ITS Sequences

(2010) Kessy Abarenkov et al.   Evolutionary Bioinformatics

First fungal community analyses of endophytic ascomycetes associated with Viscum album ssp. austriacum and its host Pinus sylvestris

(2010) Derek Peršoh et al.   Fungal Biology

Phylogeny of Cyttaria inferred from nuclear and mitochondrial sequence and morphological data

(2010) Kristin R. Peterson et al.   MYCOLOGIA

Six novelties to European bryosymbiotic discomycetes

(2010) Seppo Huhtinen et al.   NOVA HEDWIGIA

Ascomycetes associated with ectomycorrhizas: molecular diversity and ecology with particular reference to theHelotiales

(2009) Leho Tedersoo et al.   ENVIRONMENTAL MICROBIOLOGY

Fungal endophytes: diversity and functional roles

(2009) R. J. Rodriguez et al.   NEW PHYTOLOGIST

The Ascomycota Tree of Life: A Phylum-wide Phylogeny Clarifies the Origin and Evolution of Fundamental Reproductive and Ecological Traits

(2009) Conrad L. Schoch et al.   SYSTEMATIC BIOLOGY

Fungi from the roots of the common terrestrial orchid Gymnadenia conopsea

(2009) Christiane Stark et al.  

Occurrence and pathogenicity of fungi in necrotic and non-symptomatic shoots of declining common ash (Fraxinus excelsior) in Sweden

(2008) Remigijus Bakys et al.   EUROPEAN JOURNAL OF FOREST RESEARCH