Community composition of root-associated fungi in aQuercus-dominated temperate forest: “codominance” of mycorrhizal and root-endophytic fungi

Ultrafast clustering algorithms for metagenomic sequence analysis

(2012) W. Li et al.   BRIEFINGS IN BIOINFORMATICS

Modelling the global distribution of fungal species: new insights into microbial cosmopolitanism

(2012) Hirotoshi Sato et al.   MOLECULAR ECOLOGY

Towards global patterns in the diversity and community structure of ectomycorrhizal fungi

(2012) LEHO TEDERSOO et al.   MOLECULAR ECOLOGY

Structural and functional interactions between extraradical mycelia of ectomycorrhizal Pisolithus isolates

(2012) Bingyun Wu et al.   NEW PHYTOLOGIST

The importance of individuals: intraspecific diversity of mycorrhizal plants and fungi in ecosystems

(2012) David Johnson et al.   NEW PHYTOLOGIST

The network structure of plant-arbuscular mycorrhizal fungi

(2012) A. Montesinos-Navarro et al.   NEW PHYTOLOGIST

The Dark Side Is Not Fastidious – Dark Septate Endophytic Fungi of Native and Invasive Plants of Semiarid Sandy Areas

(2012) Dániel G. Knapp et al.   PLoS One

High-Coverage ITS Primers for the DNA-Based Identification of Ascomycetes and Basidiomycetes in Environmental Samples

(2012) Hirokazu Toju et al.   PLoS One

Mycorrhiza Reduces Adverse Effects of Dark Septate Endophytes (DSE) on Growth of Conifers

(2012) Vanessa Reininger et al.   PLoS One

A Thirty-Year Survey Reveals That Ecosystem Function of Fungi Predicts Phenology of Mushroom Fruiting

(2012) Hirotoshi Sato et al.   PLoS One

Hidden Fungi, Emergent Properties: Endophytes and Microbiomes

(2011) Andrea Porras-Alfaro et al.   Annual Review of Phytopathology

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

A novel statistical method for classifying habitat generalists and specialists

(2011) Robin L. Chazdon et al.   ECOLOGY

Arbuscular mycorrhizal fungal communities in plant roots are not random assemblages

(2011) John Davison et al.   FEMS MICROBIOLOGY ECOLOGY

Host Associations Between Fungal Root Endophytes and Boreal Trees

(2011) Gavin Kernaghan et al.   MICROBIAL ECOLOGY

Plant species richness belowground: higher richness and new patterns revealed by next-generation sequencing

(2011) INGA HIIESALU et al.   MOLECULAR ECOLOGY

Kakusan4 and Aminosan: two programs for comparing nonpartitioned, proportional and separate models for combined molecular phylogenetic analyses of multilocus sequence data

(2011) AKIFUMI S. TANABE   Molecular Ecology Resources

Septate endophyte colonization and host responses of grasses and forbs native to a tallgrass prairie

(2011) Keerthi Mandyam et al.   MYCORRHIZA

Diverse Helotiales associated with the roots of three species of Arctic Ericaceae provide no evidence for host specificity

(2011) John F. Walker et al.   NEW PHYTOLOGIST

A meta-analysis of plant responses to dark septate root endophytes

(2011) K. K. Newsham   NEW PHYTOLOGIST

Towards standardization of the description and publication of next-generation sequencing datasets of fungal communities

(2011) R. Henrik Nilsson et al.   NEW PHYTOLOGIST

Regional and local patterns of ectomycorrhizal fungal diversity and community structure along an altitudinal gradient in the Hyrcanian forests of northern Iran

(2011) Mohammad Bahram et al.   NEW PHYTOLOGIST

Progress in molecular and morphological taxon discovery in Fungi and options for formal classification of environmental sequences

(2011) David S. Hibbett et al.   Fungal Biology Reviews

Massively parallel 454-sequencing of fungal communities inQuercusspp. ectomycorrhizas indicates seasonal dynamics in urban and rural sites

(2010) ARI JUMPPONEN et al.   MOLECULAR ECOLOGY

Ongoing coevolution in mycorrhizal interactions

(2010) Jason D. Hoeksema   NEW PHYTOLOGIST

The UNITE database for molecular identification of fungi - recent updates and future perspectives

(2010) Kessy Abarenkov et al.   NEW PHYTOLOGIST

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Ascomycetes associated with ectomycorrhizas: molecular diversity and ecology with particular reference to theHelotiales

(2009) Leho Tedersoo et al.   ENVIRONMENTAL MICROBIOLOGY

Nitrogen form influences the response of Deschampsia antarctica to dark septate root endophytes

(2009) Rebecca Upson et al.   MYCORRHIZA

Architecture of the wood-wide web: Rhizopogon spp. genets link multiple Douglas-fir cohorts

(2009) Kevin J. Beiler et al.   NEW PHYTOLOGIST

Fungal endophytes: diversity and functional roles

(2009) R. J. Rodriguez et al.   NEW PHYTOLOGIST

Exudates of dark septate endophyte (DSE) modulate the development of the arbuscular mycorrhizal fungus (AMF) Gigaspora rosea

(2009) J.M. Scervino et al.   SOIL BIOLOGY & BIOCHEMISTRY

Reproductive isolation among cryptic species in the ectomycorrhizal genus Strobilomyces: Population-level CAPS marker-based genetic analysis

(2008) Hirotoshi Sato et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex

(2008) Micah Hamady et al.   NATURE METHODS

Strong host preference of ectomycorrhizal fungi in a Tasmanian wet sclerophyll forest as revealed by DNA barcoding and taxon-specific primers

(2008) Leho Tedersoo et al.   NEW PHYTOLOGIST