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(2020) M. Bižić et al.   Science Advances

Methylicorpusculum oleiharenae gen. nov., sp. nov., an aerobic methanotroph isolated from an oil sands tailings pond

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The Composition and Function of Microbiomes Within Microcystis Colonies Are Significantly Different Than Native Bacterial Assemblages in Two North American Lakes

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Anaerobic oxidation of methane and associated microbiome in anoxic water of Northwestern Siberian lakes

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Eutrophication will increase methane emissions from lakes and impoundments during the 21st century

(2019) Jake J. Beaulieu et al.   Nature Communications

Eutrophication influences methanotrophic activity, abundance and community structure in freshwater lakes

(2019) Yuyin Yang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

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Methane oxidation in anoxic lake water stimulated by nitrate and sulfate addition

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Microbiome of the deep Lake Baikal, a unique oxic bathypelagic habitat

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Culture-independent and culture-dependent analyses of the bacterial community in the phycosphere of cyanobloom-forming Microcystis aeruginosa

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Methanogenic archaea associated to Microcystis sp. in field samples and in culture

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Temperature Effects Explain Continental Scale Distribution of Cyanobacterial Toxins

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Close Link Between Harmful Cyanobacterial Dominance and Associated Bacterioplankton in a Tropical Eutrophic Reservoir

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Insights into the ecology, evolution, and metabolism of the widespread Woesearchaeotal lineages

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A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life

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The Extent and Regulation of Summer Methane Oxidation in Northern Lakes

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Members of the Genus Methylobacter Are Inferred To Account for the Majority of Aerobic Methane Oxidation in Oxic Soils from a Freshwater Wetland

(2018) Garrett J. Smith et al.   mBio

Crenothrix are major methane consumers in stratified lakes

(2017) Kirsten Oswald et al.   ISME Journal

Seasonal Variation in Abundance and Diversity of Bacterial Methanotrophs in Five Temperate Lakes

(2017) Md Sainur Samad et al.   Frontiers in Microbiology

Spatiotemporal analysis of microbial community dynamics during seasonal stratification events in a freshwater lake (Grand Lake, OK, USA)

(2017) Jessica M. Morrison et al.   PLoS One

Nitrification and denitrification by algae-attached and free-living microorganisms during a cyanobacterial bloom in Lake Taihu, a shallow Eutrophic Lake in China

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Malodorous volatile organic sulfur compounds: Sources, sinks and significance in inland waters

(2016) Susan B. Watson et al.   CRITICAL REVIEWS IN MICROBIOLOGY

Aerobic gammaproteobacterial methanotrophs mitigate methane emissions from oxic and anoxic lake waters

(2016) Kirsten Oswald et al.   LIMNOLOGY AND OCEANOGRAPHY

Temporal and Spatial Dynamics of Archaeal Communities in Two Freshwater Lakes at Different Trophic Status

(2016) Yuyin Yang et al.   Frontiers in Microbiology

Methane Production in Oxic Lake Waters Potentially Increases Aquatic Methane Flux to Air

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Genomic and enzymatic evidence for acetogenesis among multiple lineages of the archaeal phylum Bathyarchaeota widespread in marine sediments

(2016) Y. He et al.   Nature Microbiology

“Candidatus Finniella” (Rickettsiales, Alphaproteobacteria), Novel Endosymbionts of Viridiraptorid Amoeboflagellates (Cercozoa, Rhizaria)

(2015) Sebastian Hess et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Methane oxidation coupled to nitrate reduction under hypoxia by the GammaproteobacteriumMethylomonas denitrificans, sp. nov. type strain FJG1

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Methane oxidation coupled to oxygenic photosynthesis in anoxic waters

(2015) Jana Milucka et al.   ISME Journal

Aerobic and anaerobic nitrogen transformation processes in N2-fixing cyanobacterial aggregates

(2015) Isabell Klawonn et al.   ISME Journal

Auxotrophy and intrapopulation complementary in the ‘interactome’ of a cultivated freshwater model community

(2015) Sarahi L. Garcia et al.   MOLECULAR ECOLOGY

Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics

(2015) P. N. Evans et al.   SCIENCE

Diversity and Habitat Preferences of Cultivated and Uncultivated Aerobic Methanotrophic Bacteria Evaluated Based on pmoA as Molecular Marker

(2015) Claudia Knief   Frontiers in Microbiology

Structural Diversity of Bacterial Communities Associated with Bloom-Forming Freshwater Cyanobacteria Differs According to the Cyanobacterial Genus

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STAMP: statistical analysis of taxonomic and functional profiles

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RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

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Niche differentiation in nitrogen metabolism among methanotrophs within an operational taxonomic unit

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Methyloparacoccus murrellii gen. nov., sp. nov., a methanotroph isolated from pond water

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Taxonomic database and cut-off value for processing mcrA gene 454 pyrosequencing data by MOTHUR

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Micro-aerobic bacterial methane oxidation in the chemocline and anoxic water column of deep south-Alpine Lake Lugano (Switzerland)

(2014) Jan Blees et al.   LIMNOLOGY AND OCEANOGRAPHY

Paradox reconsidered: Methane oversaturation in well-oxygenated lake waters

(2014) Kam W. Tang et al.   LIMNOLOGY AND OCEANOGRAPHY

Bacterial Community Composition of Size-Fractioned Aggregates within the Phycosphere of Cyanobacterial Blooms in a Eutrophic Freshwater Lake

(2014) Haiyuan Cai et al.   PLoS One

Anaerobic methane oxidation coupled to denitrification is the dominant methane sink in a deep lake

(2014) Joerg S. Deutzmann et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Characterization and phylogeny of a novel methanotroph, Methyloglobulus morosus gen. nov., spec. nov

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Oxic water column methanogenesis as a major component of aquatic CH4 fluxes

(2014) Matthew J Bogard et al.   Nature Communications

Community structure of planktonic methane-oxidizing bacteria in a subtropical reservoir characterized by dominance of phylotype closely related to nitrite reducer

(2014) Hisaya Kojima et al.   Scientific Reports

Classification of pmoA amplicon pyrosequences using BLAST and the lowest common ancestor method in MEGAN

(2014) Marc G. Dumont et al.   Frontiers in Microbiology

Six-Decade Change in Water Chemistry of Large Freshwater Lake Taihu, China

(2013) Yu Tao et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Microbial minorities modulate methane consumption through niche partitioning

(2013) Paul LE Bodelier et al.   ISME Journal

Harmful Cyanobacterial Blooms: Causes, Consequences, and Controls

(2013) Hans W. Paerl et al.   MICROBIAL ECOLOGY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage

(2013) Mohamed F. Haroon et al.   NATURE

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Ecological Patterns of nifH Genes in Four Terrestrial Climatic Zones Explored with Targeted Metagenomics Using FrameBot, a New Informatics Tool

(2013) Q. Wang et al.   mBio

Highly efficient methane biocatalysis revealed in a methanotrophic bacterium

(2013) M. G. Kalyuzhnaya et al.   Nature Communications

Anaerobic Oxidization of Methane in a Minerotrophic Peatland: Enrichment of Nitrite-Dependent Methane-Oxidizing Bacteria

(2012) Baoli Zhu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Enrichment of denitrifying methanotrophic bacteria for application after direct low-temperature anaerobic sewage treatment

(2012) Christel Kampman et al.   JOURNAL OF HAZARDOUS MATERIALS

Microbial interactions with the cyanobacterium Microcystis aeruginosa and their dependence on temperature

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The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Temperature and biotic factors influence bacterial communities associated with the cyanobacteriumMicrocystissp.

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Identification of microbial communities involved in the methane cycle of a freshwater meromictic lake

(2011) Corinne Biderre-Petit et al.   FEMS MICROBIOLOGY ECOLOGY

Methanogenic archaea are globally ubiquitous in aerated soils and become active under wet anoxic conditions

(2011) Roey Angel et al.   ISME Journal

Agriculture's impact on microbial diversity and associated fluxes of carbon dioxide and methane

(2011) Uri Y Levine et al.   ISME Journal

Nitrogen and phosphorus inputs control phytoplankton growth in eutrophic Lake Taihu, China

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Microbial methane production in oxygenated water column of an oligotrophic lake

(2011) H.-P. Grossart et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Freshwater Methane Emissions Offset the Continental Carbon Sink

(2011) D. Bastviken et al.   SCIENCE

Different Atmospheric Methane-Oxidizing Communities in European Beech and Norway Spruce Soils

(2010) D. M. Degelmann et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Function-specific response to depletion of microbial diversity

(2010) Hannes Peter et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Molecular detection of potentially toxic cyanobacteria and their associated bacteria in lake water column and sediment

(2010) Konstantinos Ar. Kormas et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Methane- and ammonia-oxidizing bacteria at the chemocline of Lake Kinneret (Israel)

(2009) P Junier et al.   AQUATIC MICROBIAL ECOLOGY

Microaerobic and anaerobic metabolism of aMethylocystis parvusstrain isolated from a denitrifying bioreactor

(2009) Margarita Vecherskaya et al.   Environmental Microbiology Reports

Denitrifying bacteria anaerobically oxidize methane in the absence ofArchaea

(2008) Katharina F. Ettwig et al.   ENVIRONMENTAL MICROBIOLOGY

Methanogenic archaea: ecologically relevant differences in energy conservation

(2008) Rudolf K. Thauer et al.   NATURE REVIEWS MICROBIOLOGY