Interactions between soil properties, agricultural management and cultivar type drive structural and functional adaptations of the wheat rhizosphere microbiome to drought

Diversity and asynchrony in soil microbial communities stabilizes ecosystem functioning

(2021) Cameron Wagg et al.   eLife

Shifts Between and Among Populations of Wheat Rhizosphere Pseudomonas, Streptomyces and Phyllobacterium Suggest Consistent Phosphate Mobilization at Different Wheat Growth Stages Under Abiotic Stress

(2020) Claudia Breitkreuz et al.   Frontiers in Microbiology

Four decades of soil water stress history together with host genotype constrain the response of the wheat microbiome to soil moisture

(2020) Hamed Azarbad et al.   FEMS MICROBIOLOGY ECOLOGY

Increased future occurrences of the exceptional 2018–2019 Central European drought under global warming

(2020) Vittal Hari et al.   Scientific Reports

Dadasnake, a Snakemake implementation of DADA2 to process amplicon sequencing data for microbial ecology

(2020) Christina Weißbecker et al.   GigaScience

Investigating the consequences of climate change under different land‐use regimes: a novel experimental infrastructure

(2019) Martin Schädler et al.   Ecosphere

Phenological Stage, Plant Biomass, and Drought Stress Affect Microbial Biomass and Enzyme Activities in the Rhizosphere of Enteropogon macrostachyus

(2019) Kevin Z. MGANGA et al.   PEDOSPHERE

Extreme drought slightly decreased soil labile organic C and N contents and altered microbial community structure in a subtropical evergreen forest

(2018) Xuelei Bu et al.   FOREST ECOLOGY AND MANAGEMENT

Drought consistently alters the composition of soil fungal and bacterial communities in grasslands from two continents

(2018) Raúl Ochoa-Hueso et al.   GLOBAL CHANGE BIOLOGY

Drought delays development of the sorghum root microbiome and enriches for monoderm bacteria

(2018) Ling Xu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Metatranscriptome Analysis Deciphers Multifunctional Genes and Enzymes Linked With the Degradation of Aromatic Compounds and Pesticides in the Wheat Rhizosphere

(2018) Dhananjaya P. Singh et al.   Frontiers in Microbiology

Drought Stress and Root-Associated Bacterial Communities

(2018) Dan Naylor et al.   Frontiers in Plant Science

Microbiome Diversity in Cotton Rhizosphere Under Normal and Drought Conditions

(2018) Abid Ullah et al.   MICROBIAL ECOLOGY

It is elemental: soil nutrient stoichiometry drives bacterial diversity

(2017) Manuel Delgado-Baquerizo et al.   ENVIRONMENTAL MICROBIOLOGY

Dynamics of Soil Bacterial Communities Over a Vegetation Season Relate to Both Soil Nutrient Status and Plant Growth Phenology

(2017) Davide Francioli et al.   MICROBIAL ECOLOGY

Rhizosphere-associated bacterial network structure and spatial distribution differ significantly from bulk soil in wheat crop fields

(2017) Kunkun Fan et al.   SOIL BIOLOGY & BIOCHEMISTRY

Development of heat and drought related extreme weather events and their effect on winter wheat yields in Germany

(2017) Andrea B. Lüttger et al.   THEORETICAL AND APPLIED CLIMATOLOGY

Drought Stress Results in a Compartment-Specific Restructuring of the Rice Root-Associated Microbiomes

(2017) Christian Santos-Medellín et al.   mBio

Effects of drought on leaf carbon source and growth of European beech are modulated by soil type

(2017) Jian-Feng Liu et al.   Scientific Reports

Microbial legacies alter decomposition in response to simulated global change

(2016) Jennifer BH Martiny et al.   ISME Journal

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Wheat and Rice Growth Stages and Fertilization Regimes Alter Soil Bacterial Community Structure, But Not Diversity

(2016) Jichen Wang et al.   Frontiers in Microbiology

Management of crop water under drought: a review

(2015) Gernot Bodner et al.   Agronomy for Sustainable Development

Tax4Fun: predicting functional profiles from metagenomic 16S rRNA data: Fig. 1.

(2015) Kathrin P. Aßhauer et al.   BIOINFORMATICS

Effect of drought stress on the development of endosperm starch granules and the composition and physicochemical properties of starches from soft and hard wheat

(2015) Xurun Yu et al.   JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE

Predominant bacterial and fungal assemblages in agricultural soils during a record drought/heat wave and linkages to enzyme activities of biogeochemical cycling

(2014) V. Acosta-Martínez et al.   APPLIED SOIL ECOLOGY

Building the crops of tomorrow: advantages of symbiont-based approaches to improving abiotic stress tolerance

(2014) Devin Coleman-Derr et al.   Frontiers in Microbiology

Going back to the roots: the microbial ecology of the rhizosphere

(2013) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

Rhizosphere stoichiometry: are C : N : P ratios of plants, soils, and enzymes conserved at the plant species-level?

(2013) Colin Bell et al.   NEW PHYTOLOGIST

Stress-Induced Cytokinin Synthesis Increases Drought Tolerance through the Coordinated Regulation of Carbon and Nitrogen Assimilation in Rice

(2013) M. Reguera et al.   PLANT PHYSIOLOGY

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Soil food web properties explain ecosystem services across European land use systems

(2013) F. T. de Vries et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Snakemake--a scalable bioinformatics workflow engine

(2012) J. Koster et al.   BIOINFORMATICS

Response to water stress of soil enzymes and root exudates from drought and non-drought tolerant corn hybrids at different growth stages

(2012) Fengbin Song et al.   CANADIAN JOURNAL OF SOIL SCIENCE

Control of Drought Stress in Wheat Using Plant-Growth-Promoting Bacteria

(2012) Wedad A. Kasim et al.   JOURNAL OF PLANT GROWTH REGULATION

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Drought-tolerant endophytic actinobacteria promote growth of wheat (Triticum aestivum) under water stress conditions

(2012) Mahesh S. Yandigeri et al.   PLANT GROWTH REGULATION

A Drought Resistance-Promoting Microbiome Is Selected by Root System under Desert Farming

(2012) Ramona Marasco et al.   PLoS One

Severe drought conditions modify the microbial community structure, size and activity in amended and unamended soils

(2012) S. Hueso et al.   SOIL BIOLOGY & BIOCHEMISTRY

Linking soil biodiversity and agricultural soil management

(2012) Sören Thiele-Bruhn et al.   Current Opinion in Environmental Sustainability

Land use alters the resistance and resilience of soil food webs to drought

(2012) Franciska T. de Vries et al.   Nature Climate Change

Drought and ecosystem carbon cycling

(2011) M.K. van der Molen et al.   AGRICULTURAL AND FOREST METEOROLOGY

Drought effects on microbial biomass and enzyme activities in the rhizosphere of grasses depend on plant community composition

(2011) Muhammad Sanaullah et al.   APPLIED SOIL ECOLOGY

Pattern of solutes accumulated during leaf osmotic adjustment as related to duration of water deficit for wheat at the reproductive stage

(2011) S.A. Nio et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Optimization of hydrolytic and oxidative enzyme methods for ecosystem studies

(2011) Donovan P. German et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil Microbial Abundance and Diversity Along a Low Precipitation Gradient

(2010) Ami Bachar et al.   MICROBIAL ECOLOGY

The need to breed crop varieties suitable for organic farming, using wheat, tomato and broccoli as examples: A review

(2010) E.T. Lammerts van Bueren et al.   NJAS-WAGENINGEN JOURNAL OF LIFE SCIENCES

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

2R,3R-Butanediol, a Bacterial Volatile Produced byPseudomonas chlororaphisO6, Is Involved in Induction of Systemic Tolerance to Drought inArabidopsis thaliana

(2008) Song Mi Cho et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

The influence of soil properties on the structure of bacterial and fungal communities across land-use types

(2008) Christian L. Lauber et al.   SOIL BIOLOGY & BIOCHEMISTRY