Wheat and Rice Growth Stages and Fertilization Regimes Alter Soil Bacterial Community Structure, But Not Diversity

Temporal variation of diazotrophic community abundance and structure in surface and subsoil under four fertilization regimes during a wheat growing season

(2016) Jichen Wang et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Microbial interactions in the rhizosphere: beneficial influences of plant growth-promoting rhizobacteria on nutrient acquisition process. A review

(2015) Youry Pii et al.   BIOLOGY AND FERTILITY OF SOILS

Effects of ditch-buried straw return on water percolation, nitrogen leaching and crop yields in a rice-wheat rotation system

(2015) Haishui Yang et al.   JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE

Influence of 34-years of fertilization on bacterial communities in an intensively cultivated black soil in northeast China

(2015) Jing Zhou et al.   SOIL BIOLOGY & BIOCHEMISTRY

Effects of Different Organic Manures on the Biochemical and Microbial Characteristics of Albic Paddy Soil in a Short-Term Experiment

(2015) Qian Zhang et al.   PLoS One

Changes in soil microbial community composition in response to fertilization of paddy soils in subtropical China

(2014) Wen-Yi Dong et al.   APPLIED SOIL ECOLOGY

Responses of Bacterial Communities in Arable Soils in a Rice-Wheat Cropping System to Different Fertilizer Regimes and Sampling Times

(2014) Jun Zhao et al.   PLoS One

Long-term effects of mineral fertilizers on soil microorganisms – A review

(2014) Daniel Geisseler et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil respiration and litter decomposition responses to nitrogen fertilization rate in no-till corn systems

(2013) A. Stuart Grandy et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Soil microbial biomass and bacterial and fungal community structures responses to long-term fertilization in paddy soils

(2013) Hongzhao Yuan et al.   JOURNAL OF SOILS AND SEDIMENTS

pH-dependent distribution of soil ammonia oxidizers across a large geographical scale as revealed by high-throughput pyrosequencing

(2013) Hang-Wei Hu et al.   JOURNAL OF SOILS AND SEDIMENTS

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

The crop yield gap between organic and conventional agriculture

(2012) Tomek de Ponti et al.   AGRICULTURAL SYSTEMS

Chemical fertilizer and organic manure inputs in soil exhibit a vice versa pattern of microbial community structure

(2012) Qi-Chun Zhang et al.   APPLIED SOIL ECOLOGY

Temperature and water controls on vegetation emergence, microbial dynamics, and soil carbon and nitrogen fluxes in a high Arctic tundra ecosystem

(2012) Helen C. Glanville et al.   FUNCTIONAL ECOLOGY

Consistent effects of nitrogen amendments on soil microbial communities and processes across biomes

(2012) Kelly S. Ramirez et al.   GLOBAL CHANGE BIOLOGY

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

Characterization of the bacterial and archaeal communities in rice field soils subjected to long-term fertilization practices

(2012) Jae-Hyung Ahn et al.   JOURNAL OF MICROBIOLOGY

Different crop rotation systems as drivers of change in soil bacterial community structure and yield of rice, Oryza sativa

(2011) Do Thi Xuan et al.   BIOLOGY AND FERTILITY OF SOILS

The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology

(2011) Michael Pester et al.   CURRENT OPINION IN MICROBIOLOGY

Responses of extracellular enzyme activities and microbial community in both the rhizosphere and bulk soil to long-term fertilization practices in a fluvo-aquic soil

(2011) Chao Ai et al.   GEODERMA

Group-specific PCR primers for the phylum Acidobacteria designed based on the comparative analysis of 16S rRNA gene sequences

(2011) Sang-Hoon Lee et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Experimental warming effects on the microbial community of a temperate mountain forest soil

(2011) A. Schindlbacher et al.   SOIL BIOLOGY & BIOCHEMISTRY

The under-recognized dominance of Verrucomicrobia in soil bacterial communities

(2011) Gaddy T. Bergmann et al.   SOIL BIOLOGY & BIOCHEMISTRY

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Consistent effects of nitrogen fertilization on soil bacterial communities in contrasting systems

(2010) Kelly S. Ramirez et al.   ECOLOGY

Seasonal differences in bacterial community composition following nutrient additions in a eutrophic lake

(2010) Ryan J. Newton et al.   ENVIRONMENTAL MICROBIOLOGY

Significant Acidification in Major Chinese Croplands

(2010) J. H. Guo et al.   SCIENCE

Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota

(2010) Anja Spang et al.   TRENDS IN MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Changes in soilAcidobacteriacommunities after 2,4,6-trinitrotoluene contamination

(2009) Isabelle F. George et al.   FEMS MICROBIOLOGY LETTERS

Adaptation of soil microbial communities to temperature: comparison of fungi and bacteria in a laboratory experiment

(2009) GEMA BÁRCENAS-MORENO et al.   GLOBAL CHANGE BIOLOGY

The effects of mineral fertilizer and organic manure on soil microbial community and diversity

(2009) Wenhui Zhong et al.   PLANT AND SOIL

Plant species influence microbial diversity and carbon allocation in the rhizosphere

(2009) Natalia Ladygina et al.   SOIL BIOLOGY & BIOCHEMISTRY

Nitrogen additions and microbial biomass: a meta-analysis of ecosystem studies

(2008) Kathleen K. Treseder   ECOLOGY LETTERS

Long-term fertilization regimes affect bacterial community structure and diversity of an agricultural soil in northern China

(2008) Yuan Ge et al.   JOURNAL OF SOILS AND SEDIMENTS

Bacterial communities in soybean rhizosphere in response to soil type, soybean genotype, and their growth stage

(2008) Yanxia Xu et al.   SOIL BIOLOGY & BIOCHEMISTRY