Single-cell transcriptomics of the early developing mouse cerebral cortex disentangle the spatial and temporal components of neuronal fate acquisition

A taxonomy of transcriptomic cell types across the isocortex and hippocampal formation

(2021) Zizhen Yao et al.   CELL

Lineage tracing on transcriptional landscapes links state to fate during differentiation

(2020) Caleb Weinreb et al.   SCIENCE

Single-cell transcriptomic analysis of mouse neocortical development

(2019) Lipin Loo et al.   Nature Communications

Temporal patterning of apical progenitors and their daughter neurons in the developing neocortex

(2019) L. Telley et al.   SCIENCE

Scrublet: Computational Identification of Cell Doublets in Single-Cell Transcriptomic Data

(2019) Samuel L. Wolock et al.   Cell Systems

Dmrt factors determine the positional information of cerebral cortical progenitors via differential suppression of homeobox genes

(2019) Daijiro Konno et al.   DEVELOPMENT

Temporal plasticity of apical progenitors in the developing mouse neocortex

(2019) Polina Oberst et al.   NATURE

Establishing neuronal diversity in the spinal cord: a time and a place

(2019) Andreas Sagner et al.   DEVELOPMENT

A stochastic framework of neurogenesis underlies the assembly of neocortical cytoarchitecture

(2019) Alfredo Llorca et al.   eLife

Integrating single-cell transcriptomic data across different conditions, technologies, and species

(2018) Andrew Butler et al.   NATURE BIOTECHNOLOGY

FateID infers cell fate bias in multipotent progenitors from single-cell RNA-seq data

(2018) Josip S Herman et al.   NATURE METHODS

Progenitor Hyperpolarization Regulates the Sequential Generation of Neuronal Subtypes in the Developing Neocortex

(2018) Ilaria Vitali et al.   CELL

DMRT5, DMRT3 and EMX2 cooperatively repressGsx2at the pallium-subpallium boundary to maintain cortical identity in dorsal telencephalic progenitors

(2018) Elodie Desmaris et al.   JOURNAL OF NEUROSCIENCE

Developmental diversification of cortical inhibitory interneurons

(2018) Christian Mayer et al.   NATURE

Shared and distinct transcriptomic cell types across neocortical areas

(2018) Bosiljka Tasic et al.   NATURE

Lateral Thalamic Eminence: A Novel Origin for mGluR1/Lot Cells

(2016) Nuria Ruiz-Reig et al.   CEREBRAL CORTEX

Radial derivatives of the mouse ventral pallium traced with Dbx1-LacZ reporters

(2016) Luis Puelles et al.   JOURNAL OF CHEMICAL NEUROANATOMY

Developmental gene expression in the mouse clarifies the organization of the claustrum and related endopiriform nuclei

(2016) Charles Watson et al.   JOURNAL OF COMPARATIVE NEUROLOGY

Should we redefine the classic lateral pallium?

(2016) Mario F. Wullimann   JOURNAL OF COMPARATIVE NEUROLOGY

Adult mouse cortical cell taxonomy revealed by single cell transcriptomics

(2016) Bosiljka Tasic et al.   NATURE NEUROSCIENCE

Sequential transcriptional waves direct the differentiation of newborn neurons in the mouse neocortex

(2016) L. Telley et al.   SCIENCE

Cell-cycle-independent transitions in temporal identity of mammalian neural progenitor cells

(2016) Mayumi Okamoto et al.   Nature Communications

Zbtb20 modulates the sequential generation of neuronal layers in developing cortex

(2016) Anton B. Tonchev et al.   Molecular Brain

Selective early expression of the orphan nuclear receptorNr4a2identifies the claustrum homolog in the avian mesopallium: Impact on sauropsidian/mammalian pallium comparisons

(2015) L. Puelles et al.   JOURNAL OF COMPARATIVE NEUROLOGY

A hypothesis for the evolution of the upper layers of the neocortex through co-option of the olfactory cortex developmental program

(2015) Federico Luzzati   Frontiers in Neuroscience

Deterministic Progenitor Behavior and Unitary Production of Neurons in the Neocortex

(2014) Peng Gao et al.   CELL

The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells

(2014) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Transcriptional Regulation of Enhancers Active in Protodomains of the Developing Cerebral Cortex

(2014) Kartik Pattabiraman et al.   NEURON

Dual origins of the mammalian accessory olfactory bulb revealed by an evolutionarily conserved migratory stream

(2013) Dhananjay Huilgol et al.   NATURE NEUROSCIENCE

The Doublesex Homolog Dmrt5 is Required for the Development of the Caudomedial Cerebral Cortex in Mammals

(2012) Amandine Saulnier et al.   CEREBRAL CORTEX

How Variable Clones Build an Invariant Retina

(2012) Jie He et al.   NEURON

A Subpopulation of Dorsal Lateral/Caudal Ganglionic Eminence-Derived Neocortical Interneurons Expresses the Transcription Factor Sp8

(2011) T. Ma et al.   CEREBRAL CORTEX

Regulation of spinal interneuron development by the Olig-related protein Bhlhb5 and Notch signaling

(2011) K. Skaggs et al.   DEVELOPMENT

Ebf2 Marks Early Cortical Neurogenesis and Regulates the Generation of Cajal-Retzius Neurons in the Developing Cerebral Cortex

(2011) Shu-Mien Chuang et al.   DEVELOPMENTAL NEUROSCIENCE

Pax6 Is Required at the Telencephalic Pallial-Subpallial Boundary for the Generation of Neuronal Diversity in the Postnatal Limbic System

(2011) L. A. Cocas et al.   JOURNAL OF NEUROSCIENCE

Cerebral cortex development: From progenitors patterning to neocortical size during evolution

(2010) Alessandra Pierani et al.   DEVELOPMENT GROWTH & DIFFERENTIATION

LIM-Homeobox Gene Lhx5 Is Required for Normal Development of Cajal-Retzius Cells

(2010) A. Miquelajauregui et al.   JOURNAL OF NEUROSCIENCE

A Novel Role for Dbx1-Derived Cajal-Retzius Cells in Early Regionalization of the Cerebral Cortical Neuroepithelium

(2010) Amélie Griveau et al.   PLOS BIOLOGY

Role of Fgf8 signalling in the specification of rostral Cajal-Retzius cells

(2009) Céline Zimmer et al.   DEVELOPMENT

Emx1-Lineage Progenitors Differentially Contribute to Neural Diversity in the Striatum and Amygdala

(2009) L. A. Cocas et al.   JOURNAL OF NEUROSCIENCE

A robust and high-throughput Cre reporting and characterization system for the whole mouse brain

(2009) Linda Madisen et al.   NATURE NEUROSCIENCE

AP2γ regulates basal progenitor fate in a region- and layer-specific manner in the developing cortex

(2009) Luisa Pinto et al.   NATURE NEUROSCIENCE

DeltaNp73 regulates neuronal survival in vivo

(2009) F. Tissir et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genetic regulation of arealization of the neocortex

(2008) Dennis DM O’Leary et al.   CURRENT OPINION IN NEUROBIOLOGY

Nuclear factor I gene expression in the developing forebrain

(2008) Céline Plachez et al.   JOURNAL OF COMPARATIVE NEUROLOGY