Thermal Stress Interacts With Surgeonfish Feces to Increase Coral Susceptibility to Dysbiosis and Reduce Tissue Regeneration

Comparative genomics: Dominant coral-bacterium Endozoicomonas acroporae metabolizes dimethylsulfoniopropionate (DMSP)

(2020) Kshitij Tandon et al.   ISME Journal

Association of butterflyfishes and stony coral tissue loss disease in the Florida Keys

(2020) Kara R. Noonan et al.   CORAL REEFS

Coral Microbiomes Demonstrate Flexibility and Resilience Through a Reduction in Community Diversity Following a Thermal Stress Event

(2020) Rebecca L. Maher et al.   Frontiers in Ecology and Evolution

Variable interaction outcomes of local disturbance and El Niño-induced heat stress on coral microbiome alpha and beta diversity

(2019) Jamie M. McDevitt-Irwin et al.   CORAL REEFS

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Coral microbiome dynamics, functions and design in a changing world

(2019) Madeleine J. H. van Oppen et al.   NATURE REVIEWS MICROBIOLOGY

Multiple stressors interact primarily through antagonism to drive changes in the coral microbiome

(2019) Rebecca L. Maher et al.   Scientific Reports

Microbial Community Shifts Associated With the Ongoing Stony Coral Tissue Loss Disease Outbreak on the Florida Reef Tract

(2019) Julie L. Meyer et al.   Frontiers in Microbiology

Heat‐induced shift in coral microbiome reveals several members of the Rhodobacteraceae family as indicator species for thermal stress in Porites lutea

(2019) Wirulda Pootakham et al.   MicrobiologyOpen

A genomic view of the reef-building coral Porites lutea and its microbial symbionts

(2019) Steven J. Robbins et al.   Nature Microbiology

Surgeonfish feces increase microbial opportunism in reef-building corals

(2019) L Ezzat et al.   MARINE ECOLOGY PROGRESS SERIES

Different nitrogen sources speed recovery from corallivory and uniquely alter the microbiome of a reef-building coral

(2019) Mallory M. Rice et al.   PeerJ

Coral physiology and microbiome dynamics under combined warming and ocean acidification

(2018) Andréa G. Grottoli et al.   PLoS One

Predation scars may influence host susceptibility to pathogens: evaluating the role of corallivores as vectors of coral disease

(2018) K. J. Nicolet et al.   Scientific Reports

Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin

(2018) Nicholas A. Bokulich et al.   Microbiome

Ruegeria sp. Strains Isolated from the Reef-Building Coral Galaxea fascicularis Inhibit Growth of the Temperature-Dependent Pathogen Vibrio coralliilyticus

(2018) Natsuko Miura et al.   MARINE BIOTECHNOLOGY

High-frequency temperature variability mirrors fixed differences in thermal limits of the massive coral Porites lobata

(2018) Daniel J. Barshis et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Coral reefs in the Anthropocene

(2017) Terry P. Hughes et al.   NATURE

Arcobacter: an emerging food-borne zoonotic pathogen, its public health concerns and advances in diagnosis and control – a comprehensive review

(2017) Thadiyam Puram Ramees et al.   VETERINARY QUARTERLY

Bacterial community dynamics are linked to patterns of coral heat tolerance

(2017) Maren Ziegler et al.   Nature Communications

Regulation of life span by the gut microbiota in the short-lived African turquoise killifish

(2017) Patrick Smith et al.   eLife

Resilience of the prokaryotic microbial community of Acropora digitifera to elevated temperature

(2017) Andrian P. Gajigan et al.   MicrobiologyOpen

Exposure to elevated sea-surface temperatures below the bleaching threshold impairs coral recovery and regeneration following injury

(2017) Joshua Louis Bonesso et al.   PeerJ

Stress and stability: applying the Anna Karenina principle to animal microbiomes

(2017) Jesse R. Zaneveld et al.   Nature Microbiology

Insights into the Coral Microbiome: Underpinning the Health and Resilience of Reef Ecosystems

(2016) David G. Bourne et al.   Annual Review of Microbiology

Diversity and function of prevalent symbiotic marine bacteria in the genus Endozoicomonas

(2016) Matthew J. Neave et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

The microbiome of coral surface mucus has a key role in mediating holobiont health and survival upon disturbance

(2016) Bettina Glasl et al.   ISME Journal

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Overfishing and nutrient pollution interact with temperature to disrupt coral reefs down to microbial scales

(2016) Jesse R. Zaneveld et al.   Nature Communications

Fishing down nutrients on coral reefs

(2016) Jacob E. Allgeier et al.   Nature Communications

Individual Apostichopus japonicus fecal microbiome reveals a link with polyhydroxybutyrate producers in host growth gaps

(2016) Yohei Yamazaki et al.   Scientific Reports

Genomic Insight into the Host–Endosymbiont Relationship of Endozoicomonas montiporae CL-33T with its Coral Host

(2016) Jiun-Yan Ding et al.   Frontiers in Microbiology

Host-associated coral reef microbes respond to the cumulative pressures of ocean warming and ocean acidification

(2016) N. S. Webster et al.   Scientific Reports

Minor revision to V4 region SSU rRNA 806R gene primer greatly increases detection of SAR11 bacterioplankton

(2015) A Apprill et al.   AQUATIC MICROBIAL ECOLOGY

Changes in the bacterial community associated with black band disease in a Red Sea coral, Favia sp., in relation to disease phases

(2015) L Arotsker et al.   DISEASES OF AQUATIC ORGANISMS

Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples

(2015) Alma E. Parada et al.   ENVIRONMENTAL MICROBIOLOGY

Habitat-specific environmental conditions primarily control the microbiomes of the coral Seriatopora hystrix

(2015) Olga Pantos et al.   ISME Journal

White Syndrome inAcropora muricata:Nonspecific bacterial infection and ciliate histophagy

(2015) Michael Sweet et al.   MOLECULAR ECOLOGY

Diet strongly influences the gut microbiota of surgeonfishes

(2015) Sou Miyake et al.   MOLECULAR ECOLOGY

Projections of climate conditions that increase coral disease susceptibility and pathogen abundance and virulence

(2015) Jeffrey Maynard et al.   Nature Climate Change

Increased seawater temperature increases the abundance and alters the structure of natural Vibrio populations associated with the coral Pocillopora damicornis

(2015) Jessica Tout et al.   Frontiers in Microbiology

Natural volcanic CO2 seeps reveal future trajectories for host–microbial associations in corals and sponges

(2014) Kathleen M Morrow et al.   ISME Journal

Consumer diversity interacts with prey defenses to drive ecosystem function

(2013) Douglas B. Rasher et al.   ECOLOGY

Coral and macroalgal exudates vary in neutral sugar composition and differentially enrich reef bacterioplankton lineages

(2013) Craig E Nelson et al.   ISME Journal

Changes in Bleaching Susceptibility among Corals Subject to Ocean Warming and Recurrent Bleaching in Moorea, French Polynesia

(2013) Morgan S. Pratchett et al.   PLoS One

Comparing Bacterial Community Composition between Healthy and White Plague-Like Disease States in Orbicella annularis Using PhyloChip™ G3 Microarrays

(2013) Christina A. Kellogg et al.   PLoS One

Thermal stress responses in the bacterial biosphere of the Great Barrier Reef sponge,Rhopaloeides odorabile

(2012) Rachel Simister et al.   ENVIRONMENTAL MICROBIOLOGY

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Mechanisms of damage to corals exposed to sedimentation

(2012) M. Weber et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Innate Immune Responses of a Scleractinian Coral to Vibriosis

(2011) Jeremie Vidal-Dupiol et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Patterns of coral ecological immunology: variation in the responses of Caribbean corals to elevated temperature and a pathogen elicitor

(2011) C. V. Palmer et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Revisiting the winners and the losers a decade after coral bleaching

(2011) R van Woesik et al.   MARINE ECOLOGY PROGRESS SERIES

Selective feeding by coral reef fishes on coral lesions associated with brown band and black band disease

(2010) K. M. Chong-Seng et al.   CORAL REEFS

Climate anomalies and the increasing risk of Vibrio parahaemolyticus and Vibrio vulnificus illnesses

(2010) Jaime Martinez-Urtaza et al.   FOOD RESEARCH INTERNATIONAL

Coral-Associated Bacterial Assemblages: Current Knowledge and the Potential for Climate-Driven Impacts

(2010) Morgan E. Mouchka et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

The physiological response of reef corals to diel fluctuations in seawater temperature

(2010) Hollie M. Putnam et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Response of Pocillopora verrucosa to corallivory varies with environmental conditions

(2010) HS Lenihan et al.   MARINE ECOLOGY PROGRESS SERIES

Complete genome sequence of Ferrimonas balearica type strain (PATT)

(2010) Matt Nolan et al.   Standards in Genomic Sciences

Recurrent disturbances, recovery trajectories, and resilience of coral assemblages on a South Central Pacific reef

(2009) M. Adjeroud et al.   CORAL REEFS

Bacterial diversity and White Plague Disease-associated community changes in the Caribbean coral Montastraea faveolata

(2009) Shinichi Sunagawa et al.   ISME Journal

Resilience of Coral-Associated Bacterial Communities Exposed to Fish Farm Effluent

(2009) Melissa Garren et al.   PLoS One

Vibrio harveyi as a causative agent of the White Syndrome in tropical stony corals

(2009) Gian Marco Luna et al.   Environmental Microbiology Reports

Defecation behaviour of the Lined Bristletooth Surgeonfish Ctenochaetus striatus (Acanthuridae)

(2008) R. Krone et al.   CORAL REEFS

Herbivore species richness and feeding complementarity affect community structure and function on a coral reef

(2008) D. E. Burkepile et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA