Metagenomic analysis reveals global-scale patterns of ocean nutrient limitation

Linking regional shifts in microbial genome adaptation with surface ocean biogeochemistry

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Predictable Molecular Adaptation of Coevolving Enterococcus faecium and Lytic Phage EfV12-phi1

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Convergent estimates of marine nitrogen fixation

(2019) Wei-Lei Wang et al.   NATURE

A nutrient limitation mosaic in the eastern tropical Indian Ocean

(2019) Benjamin S. Twining et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Subtle biogeochemical regimes in the Indian Ocean revealed by spatial and diel frequency of Prochlorococcus haplotypes

(2019) Alyse A. Larkin et al.   LIMNOLOGY AND OCEANOGRAPHY

Biogeochemical controls of surface ocean phosphate

(2019) Adam C. Martiny et al.   Science Advances

Ecological Stoichiometry of Ocean Plankton

(2018) Allison R. Moreno et al.   Annual Review of Marine Science

Linking pangenomes and metagenomes: the Prochlorococcus metapangenome

(2018) Tom O. Delmont et al.   PeerJ

Marine microbial metagenomes sampled across space and time

(2018) Steven J. Biller et al.   Scientific Data

Nutrient co-limitation at the boundary of an oceanic gyre

(2017) Thomas J. Browning et al.   NATURE

Iron limitation of microbial phosphorus acquisition in the tropical North Atlantic

(2017) T. J. Browning et al.   Nature Communications

Genomic potential for arsenic efflux and methylation varies among global Prochlorococcus populations

(2015) Jaclyn K Saunders et al.   ISME Journal

Metatranscriptome analyses indicate resource partitioning between diatoms in the field

(2015) Harriet Alexander et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure and function of the global ocean microbiome

(2015) S. Sunagawa et al.   SCIENCE

Anvi’o: an advanced analysis and visualization platform for ‘omics data

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Inexpensive Multiplexed Library Preparation for Megabase-Sized Genomes

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Trimmomatic: a flexible trimmer for Illumina sequence data

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Relationships between protein-encoding gene abundance and corresponding process are commonly assumed yet rarely observed

(2014) Jennifer D Rocca et al.   ISME Journal

Impact of ocean phytoplankton diversity on phosphate uptake

(2014) Michael W. Lomas et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiple nutrient stresses at intersecting Pacific Ocean biomes detected by protein biomarkers

(2014) M. A. Saito et al.   SCIENCE

Iron, phosphorus, and nitrogen supply ratios define the biogeography of nitrogen fixation

(2013) Ben A. Ward et al.   LIMNOLOGY AND OCEANOGRAPHY

Processes and patterns of oceanic nutrient limitation

(2013) C. M. Moore et al.   Nature Geoscience

Ecology of uncultured Prochlorococcus clades revealed through single-cell genomics and biogeographic analysis

(2012) Rex R Malmstrom et al.   ISME Journal

Fast gapped-read alignment with Bowtie 2

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Generation of analysis and consistent error fields using the Data Interpolating Variational Analysis (DIVA)

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Prevalence of a calcium-based alkaline phosphatase associated with the marine cyanobacterium Prochlorococcus and other ocean bacteria

(2010) Satish Kathuria et al.   ENVIRONMENTAL MICROBIOLOGY

Impacts of atmospheric nutrient inputs on marine biogeochemistry

(2010) Aparna Krishnamurthy et al.   JOURNAL OF GEOPHYSICAL RESEARCH

Nutrient limitation of picophytoplankton photosynthesis and growth in the tropical North Atlantic

(2010) Margaret Davey et al.   LIMNOLOGY AND OCEANOGRAPHY

Magnitude of oceanic nitrogen fixation influenced by the nutrient uptake ratio of phytoplankton

(2010) Matthew M. Mills et al.   Nature Geoscience

Characterization of Prochlorococcus clades from iron-depleted oceanic regions

(2010) D. B. Rusch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Prochlorococcus: Advantages and Limits of Minimalism

(2009) Frédéric Partensky et al.   Annual Review of Marine Science

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Iron limitation of the postbloom phytoplankton communities in the Iceland Basin

(2009) Maria C. Nielsdóttir et al.   GLOBAL BIOGEOCHEMICAL CYCLES

Ecological Genomics of Marine Picocyanobacteria

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Widespread metabolic potential for nitrite and nitrate assimilation among Prochlorococcus ecotypes

(2009) A. C. Martiny et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phosphorus cycling in the North and South Atlantic Ocean subtropical gyres

(2008) Rhiannon L. Mather et al.   Nature Geoscience