Physical mixing in coastal waters controls and decouples nitrification via biomass dilution

Single cell analyses reveal contrasting life strategies of the two main nitrifiers in the ocean

(2020) Katharina Kitzinger et al.   Nature Communications

Recent Increases in Water Column Denitrification in the Seasonally Suboxic Bottom Waters of the Santa Barbara Basin

(2019) Margot E. White et al.   GEOPHYSICAL RESEARCH LETTERS

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Geomicrobiology of the carbon, nitrogen and sulphur cycles in Powell Lake: a permanently stratified water column containing ancient seawater

(2019) Sebastian Haas et al.   ENVIRONMENTAL MICROBIOLOGY

Global niche of marine anaerobic metabolisms expanded by particle microenvironments

(2018) Daniele Bianchi et al.   Nature Geoscience

Ecological control of nitrite in the upper ocean

(2018) Emily J. Zakem et al.   Nature Communications

Observations of Variable Ammonia Oxidation and Nitrous Oxide Flux in a Eutrophic Estuary

(2018) Sarah M. Laperriere et al.   Estuaries and Coasts

Ubiquity and Diversity of Complete Ammonia Oxidizers (Comammox)

(2018) Fei Xia et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Temperature Decouples Ammonium and Nitrite Oxidation in Coastal Waters

(2017) Sylvia C. Schaefer et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Microbiome Helper: a Custom and Streamlined Workflow for Microbiome Research

(2017) André M. Comeau et al.   mSystems

Coastal water column ammonium and nitrite oxidation are decoupled in summer

(2016) Elise M. Heiss et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Geographic Distribution of Archaeal Ammonia Oxidizing Ecotypes in the Atlantic Ocean

(2016) Eva Sintes et al.   Frontiers in Microbiology

Extensive nitrogen loss from permeable sediments off North-West Africa

(2016) Sarah Sokoll et al.   Journal of Geophysical Research-Biogeosciences

Revisiting nitrification in the Eastern Tropical South Pacific: A focus on controls

(2016) Xuefeng Peng et al.   JOURNAL OF GEOPHYSICAL RESEARCH-OCEANS

Seasonal assemblages and short-lived blooms in coastal north-west Atlantic Ocean bacterioplankton

(2015) Heba El-Swais et al.   ENVIRONMENTAL MICROBIOLOGY

Biogeochemical and metagenomic analysis of nitrite accumulation in the Gulf of Mexico hypoxic zone

(2015) Laura A. Bristow et al.   LIMNOLOGY AND OCEANOGRAPHY

Pluses and minuses of ammonium and nitrate uptake and assimilation by phytoplankton and implications for productivity and community composition, with emphasis on nitrogen-enriched conditions

(2015) Patricia M. Glibert et al.   LIMNOLOGY AND OCEANOGRAPHY

Complete nitrification by a single microorganism

(2015) Maartje A. H. J. van Kessel et al.   NATURE

Complete nitrification by Nitrospira bacteria

(2015) Holger Daims et al.   NATURE

Metaproteomic analysis of a winter to spring succession in coastal northwest Atlantic Ocean microbial plankton

(2014) Anna A Georges et al.   ISME Journal

Seasonal variation in the metratranscriptomes of a Thaumarchaeota population from SE USA coastal waters

(2013) James T Hollibaugh et al.   ISME Journal

Ammonia oxidation kinetics and temperature sensitivity of a natural marine community dominated by Archaea

(2013) Rachel E A Horak et al.   ISME Journal

Copper requirements of the ammonia-oxidizing archaeonNitrosopumilus maritimusSCM1 and implications for nitrification in the marine environment

(2013) Shady A. Amin et al.   LIMNOLOGY AND OCEANOGRAPHY

The marine nitrogen cycle: recent discoveries, uncertainties and the potential relevance of climate change

(2013) M. Voss et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Human-induced nitrogen–phosphorus imbalances alter natural and managed ecosystems across the globe

(2013) Josep Peñuelas et al.   Nature Communications

Enhanced upper ocean stratification with climate change in the CMIP3 models

(2012) Antonietta Capotondi et al.   JOURNAL OF GEOPHYSICAL RESEARCH

Ammonium, nitrate and phytoplankton interactions in a freshwater tidal estuarine zone: potential effects of cultural eutrophication

(2011) Rita B. Domingues et al.   AQUATIC SCIENCES

Differential photoinhibition of bacterial and archaeal ammonia oxidation

(2011) Stephanie N. Merbt et al.   FEMS MICROBIOLOGY LETTERS

Seasonal Synechococcus and Thaumarchaeal population dynamics examined with high resolution with remote in situ instrumentation

(2011) Julie C Robidart et al.   ISME Journal

Crenarchaeol tracks winter blooms of ammonia-oxidizing Thaumarchaeota in the coastal North Sea

(2011) Angela Pitcher et al.   LIMNOLOGY AND OCEANOGRAPHY

Simulating the three-dimensional circulation and hydrography of Halifax Harbour using a multi-nested coastal ocean circulation model

(2011) Shiliang Shan et al.   OCEAN DYNAMICS

Abandoning Sverdrup's Critical Depth Hypothesis on phytoplankton blooms

(2010) Michael J. Behrenfeld   ECOLOGY

Population ecology of nitrifying Archaea and Bacteria in the Southern California Bight

(2010) J. Michael Beman et al.   ENVIRONMENTAL MICROBIOLOGY

Propagation of an atmospheric climate signal to phytoplankton in a small marine basin

(2010) William K. W. Li et al.   LIMNOLOGY AND OCEANOGRAPHY

Temporary uncoupling of the marine nitrogen cycle: Accumulation of nitrite on the Bering Sea shelf

(2010) Calvin W. Mordy et al.   MARINE CHEMISTRY

Nitrate supply from deep to near-surface waters of the North Pacific subtropical gyre

(2010) Kenneth S. Johnson et al.   NATURE

Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria

(2009) Willm Martens-Habbena et al.   NATURE