Single-cell transcriptomics identifies limbal stem cell population and cell types mapping its differentiation trajectory in limbal basal epithelium of human cornea

Single-cell transcriptional diversity is a hallmark of developmental potential

(2020) Gunsagar S. Gulati et al.   SCIENCE

Id1 and Id3 Maintain Steady-State Hematopoiesis by Promoting Sinusoidal Endothelial Cell Survival and Regeneration

(2020) Stephen Gadomski et al.   Cell Reports

Comprehensive Integration of Single-Cell Data

(2019) Tim Stuart et al.   CELL

Defining Adult Stem Cell Function at Its Simplest: The Ability to Replace Lost Cells through Mitosis

(2019) Yorick Post et al.   Cell Stem Cell

Limbal Stem Cell Deficiency—Demography and Underlying Causes

(2018) Jayesh Vazirani et al.   AMERICAN JOURNAL OF OPHTHALMOLOGY

Prospectively Isolated Tetraspanin + Neoblasts Are Adult Pluripotent Stem Cells Underlying Planaria Regeneration

(2018) An Zeng et al.   CELL

Single cell transcriptomics in neuroscience: cell classification and beyond

(2018) Bosiljka Tasic   CURRENT OPINION IN NEUROBIOLOGY

An Insight into the Difficulties in the Discovery of Specific Biomarkers of Limbal Stem Cells

(2018) Zhi Guo et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Integrating single-cell transcriptomic data across different conditions, technologies, and species

(2018) Andrew Butler et al.   NATURE BIOTECHNOLOGY

Cell type atlas and lineage tree of a whole complex animal by single-cell transcriptomics

(2018) Mireya Plass et al.   SCIENCE

BMP and WNT signalling cooperate through LEF1 in the neuronal specification of adult hippocampal neural stem and progenitor cells

(2018) Tomás Armenteros et al.   Scientific Reports

Single-cell transcriptomics reveals a new dynamical function of transcription factors during embryonic hematopoiesis

(2018) Isabelle Bergiers et al.   eLife

Rapid Mast Cell Generation from Gata2 Reporter Pluripotent Stem Cells

(2018) Mari-Liis Kauts et al.   Stem Cell Reports

Extracellular proteoglycan decorin maintains human hair follicle stem cells

(2018) Katsuma Miyachi et al.   JOURNAL OF DERMATOLOGY

A method for manual and automated multiplex RNAscope in situ hybridization and immunocytochemistry on cytospin samples

(2018) Sara Chan et al.   PLoS One

SCENIC: single-cell regulatory network inference and clustering

(2017) Sara Aibar et al.   NATURE METHODS

Single-cell mRNA quantification and differential analysis with Census

(2017) Xiaojie Qiu et al.   NATURE METHODS

Reversed graph embedding resolves complex single-cell trajectories

(2017) Xiaojie Qiu et al.   NATURE METHODS

Comprehensive Classification of Retinal Bipolar Neurons by Single-Cell Transcriptomics

(2016) Karthik Shekhar et al.   CELL

FOXC1 maintains the hair follicle stem cell niche and governs stem cell quiescence to preserve long-term tissue-regenerating potential

(2016) Kenneth Lay et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq

(2016) I. Tirosh et al.   SCIENCE

The balance of Id3 and E47 determines neural stem/precursor cell differentiation into astrocytes

(2015) C. Bohrer et al.   EMBO JOURNAL

Single-cell RNA-seq reveals changes in cell cycle and differentiation programs upon aging of hematopoietic stem cells

(2015) Monika S. Kowalczyk et al.   GENOME RESEARCH

Natural Functions of PLIN2 Mediating Wnt/LiCl Signaling and Glycogen Synthase Kinase 3 (GSK3)/GSK3 Substrate-Related Effects Are Modulated by Lipid

(2015) Xunxian Liu et al.   MOLECULAR AND CELLULAR BIOLOGY

Expression of Krüppel-Like Factor 6, KLF6, in Rat Pituitary Stem/Progenitor Cells and Its Regulation of the PRRX2 Gene

(2014) Hiroki UEHARU et al.   JOURNAL OF REPRODUCTION AND DEVELOPMENT

ABCB5 is a limbal stem cell gene required for corneal development and repair

(2014) Bruce R. Ksander et al.   NATURE

Foxc1 is a critical regulator of haematopoietic stem/progenitor cell niche formation

(2014) Yoshiki Omatsu et al.   NATURE

The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells

(2014) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

STRING v10: protein–protein interaction networks, integrated over the tree of life

(2014) Damian Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

Wnt/ -catenin signalling regulates Sox17 expression and is essential for organizer and endoderm formation in the mouse

(2013) S. Engert et al.   DEVELOPMENT

The Tetraspanin CD9 Affords High-Purity Capture of All Murine Hematopoietic Stem Cells

(2013) Göran Karlsson et al.   Cell Reports

Concise Review: Identifying Limbal Stem Cells: Classical Concepts and New Challenges

(2013) Aaron W. Joe et al.   Stem Cells Translational Medicine

Expression of the tetraspanin family members Tspan3, Tspan4, Tspan5 and Tspan7 during Xenopus laevis embryonic development

(2012) Jubin Kashef et al.   GENE EXPRESSION PATTERNS

Transcription Factor TCF4 Maintains the Properties of Human Corneal Epithelial Stem Cells

(2012) Rong Lu et al.   STEM CELLS

Targeting SOX17 in Human Embryonic Stem Cells Creates Unique Strategies for Isolating and Analyzing Developing Endoderm

(2011) Pei Wang et al.   Cell Stem Cell

TCF/Lef1 activity controls establishment of diverse stem and progenitor cell compartments in mouse epidermis

(2011) Monika Petersson et al.   EMBO JOURNAL

Sox17 expression confers self-renewal potential and fetal stem cell characteristics upon adult hematopoietic progenitors

(2011) S. He et al.   GENES & DEVELOPMENT

The β-catenin/Tcf4/survivin signaling maintains a less differentiated phenotype and high proliferative capacity of human corneal epithelial progenitor cells

(2011) Rong Lu et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

Molecular signatures and biological pathway profiles of human corneal epithelial progenitor cells

(2010) Fang Bian et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY