Prevalence of antibiotic resistance genes and bacterial pathogens along the soil–mangrove root continuum
出版年份 2020 全文链接
标题
Prevalence of antibiotic resistance genes and bacterial pathogens along the soil–mangrove root continuum
作者
关键词
Root compartments, Antibiotic resistance genes (ARGs), Mobile genetic elements (MGEs), Pathogens, Dissemination
出版物
JOURNAL OF HAZARDOUS MATERIALS
Volume 408, Issue -, Pages 124985
出版商
Elsevier BV
发表日期
2020-12-27
DOI
10.1016/j.jhazmat.2020.124985
参考文献
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- Soil‐borne pathogens as determinants of regeneration patterns at community level in Mediterranean forests
- (2020) Jara Domínguez‐Begines et al. NEW PHYTOLOGIST
- Sonneratia apetala introduction alters methane cycling microbial communities and increases methane emissions
- (2020) Xiaoli Yu et al. SOIL BIOLOGY & BIOCHEMISTRY
- Root microbiota assembly and adaptive differentiation among European Arabidopsis populations
- (2020) Thorsten Thiergart et al. Nature Ecology & Evolution
- The proportion of soil-borne pathogens increases with warming at the global scale
- (2020) Manuel Delgado-Baquerizo et al. Nature Climate Change
- Antibiotic Resistomes in Plant Microbiomes
- (2019) Qing-Lin Chen et al. TRENDS IN PLANT SCIENCE
- Transfer of antibiotic resistance from manure-amended soils to vegetable microbiomes
- (2019) Yu-Jing Zhang et al. ENVIRONMENT INTERNATIONAL
- Inter- and intracellular colonization of Arabidopsis roots by endophytic actinobacteria and the impact of plant hormones on their antimicrobial activity
- (2018) Anne van der Meij et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- Microbial community and metagenome dynamics during biodegradation of dispersed oil reveals potential key-players in cold Norwegian seawater
- (2018) Deni Ribicic et al. MARINE POLLUTION BULLETIN
- Assembly and ecological function of the root microbiome across angiosperm plant species
- (2018) Connor R. Fitzpatrick et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Microbial Interkingdom Interactions in Roots Promote Arabidopsis Survival
- (2018) Paloma Durán et al. CELL
- Application of Struvite Alters the Antibiotic Resistome in Soil, Rhizosphere, and Phyllosphere
- (2017) Qing-Lin Chen et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Isothermal assay targeting class 1 integrase gene for environmental surveillance of antibiotic resistance markers
- (2017) Robert D. Stedtfeld et al. JOURNAL OF ENVIRONMENTAL MANAGEMENT
- Do manure-borne or indigenous soil microorganisms influence the spread of antibiotic resistance genes in manured soil?
- (2017) Qing-Lin Chen et al. SOIL BIOLOGY & BIOCHEMISTRY
- Deciphering composition and function of the root microbiome of a legume plant
- (2017) Kyle Hartman et al. Microbiome
- Occurrence and distribution of the environmental pollutant antibiotics in Gaoqiao mangrove area, China
- (2016) Yuan Li et al. CHEMOSPHERE
- Anthropogenic impact on mangrove sediments triggers differential responses in the heavy metals and antibiotic resistomes of microbial communities
- (2016) Lucélia Cabral et al. ENVIRONMENTAL POLLUTION
- Antibiotic resistance of Vibrio parahaemolyticus and Vibrio vulnificus in various countries: A review
- (2016) Sara Elmahdi et al. FOOD MICROBIOLOGY
- Virtual increase or latent loss? A reassessment of mangrove populations and their conservation in Guangdong, southern China
- (2016) Yisheng Peng et al. MARINE POLLUTION BULLETIN
- Biogeographic patterns of soil diazotrophic communities across six forests in the North America
- (2016) Qichao Tu et al. MOLECULAR ECOLOGY
- Dissemination of Antimicrobial Resistance in Microbial Ecosystems through Horizontal Gene Transfer
- (2016) Christian J. H. von Wintersdorff et al. Frontiers in Microbiology
- MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
- (2015) Dinghua Li et al. BIOINFORMATICS
- Phasing amplicon sequencing on Illumina Miseq for robust environmental microbial community analysis
- (2015) Liyou Wu et al. BMC MICROBIOLOGY
- Antibiotic resistance genes in manure-amended soil and vegetables at harvest
- (2015) Feng-Hua Wang et al. JOURNAL OF HAZARDOUS MATERIALS
- A Comprehensive, Automatically Updated Fungal ITS Sequence Dataset for Reference-Based Chimera Control in Environmental Sequencing Efforts
- (2015) R. Henrik Nilsson et al. MICROBES AND ENVIRONMENTS
- Tackling antibiotic resistance: the environmental framework
- (2015) Thomas U. Berendonk et al. NATURE REVIEWS MICROBIOLOGY
- Structure, variation, and assembly of the root-associated microbiomes of rice
- (2015) Joseph Edwards et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Native root-associated bacteria rescue a plant from a sudden-wilt disease that emerged during continuous cropping
- (2015) Rakesh Santhanam et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Taxator-tk: precise taxonomic assignment of metagenomes by fast approximation of evolutionary neighborhoods
- (2014) J. Dröge et al. BIOINFORMATICS
- The soil resistome: a critical review on antibiotic resistance origins, ecology and dissemination potential in telluric bacteria
- (2014) Joseph Nesme et al. ENVIRONMENTAL MICROBIOLOGY
- Structure and Functions of the Bacterial Microbiota of Plants
- (2013) Davide Bulgarelli et al. Annual Review of Plant Biology
- Human Health Risk Assessment (HHRA) for Environmental Development and Transfer of Antibiotic Resistance
- (2013) Nicholas J. Ashbolt et al. ENVIRONMENTAL HEALTH PERSPECTIVES
- ITS1 versus ITS2 as DNA metabarcodes for fungi
- (2013) R. Blaalid et al. Molecular Ecology Resources
- UPARSE: highly accurate OTU sequences from microbial amplicon reads
- (2013) Robert C Edgar NATURE METHODS
- CD-HIT: accelerated for clustering the next-generation sequencing data
- (2012) Limin Fu et al. BIOINFORMATICS
- Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota
- (2012) Davide Bulgarelli et al. NATURE
- RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics
- (2012) M. Lohse et al. NUCLEIC ACIDS RESEARCH
- The Shared Antibiotic Resistome of Soil Bacteria and Human Pathogens
- (2012) K. J. Forsberg et al. SCIENCE
- The rhizosphere microbiome and plant health
- (2012) Roeland L. Berendsen et al. TRENDS IN PLANT SCIENCE
- Distribution of antibiotic resistance genes in glacier environments
- (2012) Takahiro Segawa et al. Environmental Microbiology Reports
- Acquired Antibiotic Resistance: Are We Born with It?
- (2011) Lu Zhang et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Metagenomic exploration of antibiotic resistance in soil
- (2011) Jean-Michel Monier et al. CURRENT OPINION IN MICROBIOLOGY
- Antibiotic resistance gene spread due to manure application on agricultural fields
- (2011) Holger Heuer et al. CURRENT OPINION IN MICROBIOLOGY
- Living inside plants: bacterial endophytes
- (2011) Barbara Reinhold-Hurek et al. CURRENT OPINION IN PLANT BIOLOGY
- Antibiotic and antiseptic resistance genes are linked on a novel mobile genetic element: Tn6087
- (2011) Lena Ciric et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Bayesian community-wide culture-independent microbial source tracking
- (2011) Dan Knights et al. NATURE METHODS
- HMMER web server: interactive sequence similarity searching
- (2011) R. D. Finn et al. NUCLEIC ACIDS RESEARCH
- Pyrosequencing of Antibiotic-Contaminated River Sediments Reveals High Levels of Resistance and Gene Transfer Elements
- (2011) Erik Kristiansson et al. PLoS One
- Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria
- (2011) R. Mendes et al. SCIENCE
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- INTEGRALL: a database and search engine for integrons, integrases and gene cassettes
- (2009) A. Moura et al. BIOINFORMATICS
- Antibiotic resistance genes from the environment: a perspective through newly identified antibiotic resistance mechanisms in the clinical setting
- (2009) R. Canteón CLINICAL MICROBIOLOGY AND INFECTION
- Antibiotic-Resistant Bugs in the 21st Century — A Clinical Super-Challenge
- (2009) Cesar A. Arias et al. NEW ENGLAND JOURNAL OF MEDICINE
- The role of natural environments in the evolution of resistance traits in pathogenic bacteria
- (2009) J. L. Martinez PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Antibiotics for Emerging Pathogens
- (2009) M. A. Fischbach et al. SCIENCE
- Influence of industrial contamination on mobile genetic elements: class 1 integron abundance and gene cassette structure in aquatic bacterial communities
- (2008) Meredith S Wright et al. ISME Journal
- Multi-site Analysis Reveals Widespread Antibiotic Resistance in the Marine Pathogen Vibrio vulnificus
- (2008) Craig Baker-Austin et al. MICROBIAL ECOLOGY
- Antibiotics and Antibiotic Resistance Genes in Natural Environments
- (2008) J. L. Martinez SCIENCE
- Properties of bacterial endophytes and their proposed role in plant growth
- (2008) Pablo R. Hardoim et al. TRENDS IN MICROBIOLOGY
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