标题
Next-generation sequencing technologies: An overview
作者
关键词
Next-generation sequencing, Short-read sequencing, Long-read sequencing
出版物
HUMAN IMMUNOLOGY
Volume -, Issue -, Pages -
出版商
Elsevier BV
发表日期
2021-03-20
DOI
10.1016/j.humimm.2021.02.012
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- High-accuracy long-read amplicon sequences using unique molecular identifiers with Nanopore or PacBio sequencing
- (2021) Søren M. Karst et al. NATURE METHODS
- Bioinformatics and Computational Tools for Next-Generation Sequencing Analysis in Clinical Genetics
- (2020) Rute Pereira et al. Journal of Clinical Medicine
- Lifetime and Stability of Silicon Nitride Nanopores and Nanopore Arrays for Ionic Measurements
- (2020) Yung-Chien Chou et al. ACS Nano
- Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes
- (2020) Kishwar Shafin et al. NATURE BIOTECHNOLOGY
- Combining short and long read sequencing to characterize antimicrobial resistance genes on plasmids applied to an unauthorized genetically modified Bacillus
- (2020) Bas Berbers et al. Scientific Reports
- Capturing Differential Allele-Level Expression and Genotypes of All Classical HLA Loci and Haplotypes by a New Capture RNA-Seq Method
- (2020) Fumiko Yamamoto et al. Frontiers in Immunology
- Rapid high‐resolution HLA genotyping by MinION Oxford nanopore sequencing for deceased donor organ allocation
- (2020) Dianne De Santis et al. HLA
- Utilizing nanopore sequencing technology for the rapid and comprehensive characterization of eleven HLA loci; addressing the need for deceased donor expedited HLA typing
- (2020) Timothy L. Mosbruger et al. HUMAN IMMUNOLOGY
- Long-read human genome sequencing and its applications
- (2020) Glennis A. Logsdon et al. NATURE REVIEWS GENETICS
- Recipients Receiving Better HLA-Matched Hematopoietic Cell Transplantation Grafts, Uncovered by a Novel HLA Typing Method, Have Superior Survival: A Retrospective Study
- (2019) Neema P. Mayor et al. BIOLOGY OF BLOOD AND MARROW TRANSPLANTATION
- Single-Stranded DNA Translocation Recordings through Solid-State Nanopores on Glass Chips at 10 MHz Measurement Bandwidth
- (2019) Chen-Chi Chien et al. ACS Nano
- Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome
- (2019) Aaron M. Wenger et al. NATURE BIOTECHNOLOGY
- Bioinformatics Strategies, Challenges, and Opportunities for Next Generation Sequencing-Based HLA Genotyping
- (2019) Steffen Klasberg et al. TRANSFUSION MEDICINE AND HEMOTHERAPY
- OUP accepted manuscript
- (2018) BRIEFINGS IN BIOINFORMATICS
- The Third Revolution in Sequencing Technology
- (2018) Erwin L. van Dijk et al. TRENDS IN GENETICS
- BulkVis: a graphical viewer for Oxford nanopore bulk FAST5 files
- (2018) Alexander Payne et al. BIOINFORMATICS
- Next-Generation Sequencing Technologies
- (2018) W. Richard McCombie et al. Cold Spring Harbor Perspectives in Medicine
- The role of HLA genes in pharmacogenomics: unravelling HLA associated adverse drug reactions
- (2017) Patricia T. Illing et al. IMMUNOGENETICS
- DNA sequencing at 40: past, present and future
- (2017) Jay Shendure et al. NATURE
- Nanopore long-read RNAseq reveals widespread transcriptional variation among the surface receptors of individual B cells
- (2017) Ashley Byrne et al. Nature Communications
- Evaluating Variant Calling Tools for Non-Matched Next-Generation Sequencing Data
- (2017) Sarah Sandmann et al. Scientific Reports
- Advancements in Next-Generation Sequencing
- (2016) Shawn E. Levy et al. Annual Review of Genomics and Human Genetics
- The next generation of target capture technologies - large DNA fragment enrichment and sequencing determines regional genomic variation of high complexity
- (2016) Johannes Dapprich et al. BMC GENOMICS
- Clinical Validation and Implementation of a Targeted Next-Generation Sequencing Assay to Detect Somatic Variants in Non-Small Cell Lung, Melanoma, and Gastrointestinal Malignancies
- (2016) Kevin E. Fisher et al. JOURNAL OF MOLECULAR DIAGNOSTICS
- Real-time, portable genome sequencing for Ebola surveillance
- (2016) Joshua Quick et al. NATURE
- Coming of age: ten years of next-generation sequencing technologies
- (2016) Sara Goodwin et al. NATURE REVIEWS GENETICS
- Determining performance characteristics of an NGS-based HLA typing method for clinical applications
- (2016) J. L. Duke et al. HLA
- Library construction for next-generation sequencing: Overviews and challenges
- (2016) Steven R. Head et al. BIOTECHNIQUES
- Benchmarking of the Oxford Nanopore MinION sequencing for quantitative and qualitative assessment of cDNA populations
- (2016) Spyros Oikonomopoulos et al. Scientific Reports
- Genomic variant annotation and prioritization with ANNOVAR and wANNOVAR
- (2015) Hui Yang et al. Nature Protocols
- Informatics for RNA Sequencing: A Web Resource for Analysis on the Cloud
- (2015) Malachi Griffith et al. PLoS Computational Biology
- PacBio Sequencing and Its Applications
- (2015) Anthony Rhoads et al. GENOMICS PROTEOMICS & BIOINFORMATICS
- Library preparation methods for next-generation sequencing: Tone down the bias
- (2014) Erwin L. van Dijk et al. EXPERIMENTAL CELL RESEARCH
- Next-generation sequencing technologies: breaking the sound barrier of human genetics
- (2014) E. M. Bahassi et al. MUTAGENESIS
- Sequencing depth and coverage: key considerations in genomic analyses
- (2014) David Sims et al. NATURE REVIEWS GENETICS
- Ten years of next-generation sequencing technology
- (2014) Erwin L. van Dijk et al. TRENDS IN GENETICS
- Next-Generation Sequencing Platforms
- (2013) Elaine R. Mardis Annual Review of Analytical Chemistry
- Dominant Form of Congenital Hyperinsulinism Maps to HK1 Region on 10q
- (2013) Sara E. Pinney et al. Hormone Research in Paediatrics
- Computational and Bioinformatics Frameworks for Next-Generation Whole Exome and Genome Sequencing
- (2013) Marisa P. Dolled-Filhart et al. TheScientificWorldJOURNAL
- TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
- (2013) Daehwan Kim et al. GENOME BIOLOGY
- VAT: a computational framework to functionally annotate variants in personal genomes within a cloud-computing environment
- (2012) Lukas Habegger et al. BIOINFORMATICS
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
- (2012) H. Thorvaldsdottir et al. BRIEFINGS IN BIOINFORMATICS
- Key Principles and Clinical Applications of "Next-Generation" DNA Sequencing
- (2012) J. M. Rizzo et al. Cancer Prevention Research
- Transcriptome analysis using next-generation sequencing
- (2012) Kai-Oliver Mutz et al. CURRENT OPINION IN BIOTECHNOLOGY
- Progress in Ion Torrent semiconductor chip based sequencing
- (2012) Barry Merriman et al. ELECTROPHORESIS
- Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
- (2012) Cole Trapnell et al. Nature Protocols
- HLA typing from RNA-Seq sequence reads
- (2012) Sebastian Boegel et al. Genome Medicine
- RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
- (2011) Bo Li et al. BMC BIOINFORMATICS
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- Next generation sequencing in epigenetics: Insights and challenges
- (2011) Emma Meaburn et al. SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY
- High-Throughput Detection of Actionable Genomic Alterations in Clinical Tumor Samples by Targeted, Massively Parallel Sequencing
- (2011) Nikhil Wagle et al. Cancer Discovery
- The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
- (2010) A. McKenna et al. GENOME RESEARCH
- Next-generation sequencing: the solution for high-resolution, unambiguous human leukocyte antigen typing
- (2010) C. Lind et al. HUMAN IMMUNOLOGY
- Target-enrichment strategies for next-generation sequencing
- (2010) Lira Mamanova et al. NATURE METHODS
- ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data
- (2010) K. Wang et al. NUCLEIC ACIDS RESEARCH
- Microtubule Actin Crosslinking Factor 1 Regulates the Balbiani Body and Animal-Vegetal Polarity of the Zebrafish Oocyte
- (2010) Tripti Gupta et al. PLoS Genetics
- Massively Parallel Sequencing: The Next Big Thing in Genetic Medicine
- (2009) Tracy Tucker et al. AMERICAN JOURNAL OF HUMAN GENETICS
- TopHat: discovering splice junctions with RNA-Seq
- (2009) Cole Trapnell et al. BIOINFORMATICS
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- Continuous base identification for single-molecule nanopore DNA sequencing
- (2009) James Clarke et al. Nature Nanotechnology
- High-resolution, high-throughput HLA genotyping by next-generation sequencing
- (2009) G. Bentley et al. TISSUE ANTIGENS
- RNA-Seq: a revolutionary tool for transcriptomics
- (2008) Zhong Wang et al. NATURE REVIEWS GENETICS
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