Next-generation sequencing for the diagnosis of hepatitis B: current status and future prospects
出版年份 2021 全文链接
标题
Next-generation sequencing for the diagnosis of hepatitis B: current status and future prospects
作者
关键词
-
出版物
EXPERT REVIEW OF MOLECULAR DIAGNOSTICS
Volume -, Issue -, Pages 1-16
出版商
Informa UK Limited
发表日期
2021-04-22
DOI
10.1080/14737159.2021.1913055
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- HBV X protein mutations affect HBV transcription and association of histone-modifying enzymes with covalently closed circular DNA
- (2020) Chun Kong Chong et al. Scientific Reports
- Histone Acetylation as a Regenerative Target in the Dentine-Pulp Complex
- (2020) Yukako Yamauchi et al. Frontiers in Genetics
- Cell‐free virus‐host chimera DNA from Hepatitis B virus integration sites as a circulating biomarker of hepatocellular cancer
- (2020) Chiao‐Ling Li et al. HEPATOLOGY
- HBV variants are common in the “immune‐tolerant”phase of chronic hepatitis B
- (2020) Lilly Yuen et al. JOURNAL OF VIRAL HEPATITIS
- Conservation and variability of hepatitis B core at different chronic hepatitis stages
- (2020) Marçal Yll et al. WORLD JOURNAL OF GASTROENTEROLOGY
- Evidence for host-dependent RNA editing in the transcriptome of SARS-CoV-2
- (2020) Salvatore Di Giorgio et al. Science Advances
- Identification of mutations in the S gene of hepatitis B virus in HIV positive Mexican patients with occult hepatitis B virus infection
- (2020) Karina Enriquez-Navarro et al. Annals of Hepatology
- Distribution of hepatitis B virus genotypes in the general population of Myanmar via nationwide study
- (2020) Yi Yi Kyaw et al. BMC INFECTIOUS DISEASES
- Nanopore sequencing from extraction-free direct PCR of dried serum spots for portable hepatitis B virus drug-resistance typing
- (2020) Stuart Astbury et al. JOURNAL OF CLINICAL VIROLOGY
- Developing a sensitive HBV genotyping assay for HBV DNA suppressed patients using both DNA and RNA sequencing
- (2020) Yang Liu et al. JOURNAL OF MEDICAL VIROLOGY
- Next-Generation Sequencing-Based Quantitative Detection of Hepatitis B Virus Pre-S Mutants in Plasma Predicts Hepatocellular Carcinoma Recurrence
- (2020) Chiao-Fang Teng et al. Viruses-Basel
- Advances with RNAi-Based Therapy for Hepatitis B Virus Infection
- (2020) Fiona van den Berg et al. Viruses-Basel
- Analysis of HBV Genomes Integrated into the Genomes of Human Hepatoma PLC/PRF/5 Cells by HBV Sequence Capture-Based Next-Generation Sequencing
- (2020) Tomotaka Ishii et al. Genes
- Permanent Inactivation of HBV Genomes by CRISPR/Cas9-Mediated Non-cleavage Base Editing
- (2020) Yu-Chan Yang et al. Molecular Therapy-Nucleic Acids
- A New Method for Next-Generation Sequencing of the Full Hepatitis B Virus Genome from A Clinical Specimen: Impact for Virus Genotyping
- (2020) Flavia Hebeler-Barbosa et al. Microorganisms
- Hepatitis B virus pre-S2 deletion (nucleotide 1 to 54) in plasma predicts recurrence of hepatocellular carcinoma after curative surgical resection
- (2020) Chiao-Fang Teng et al. PLoS One
- Analysis of HBV X gene quasispecies characteristics by next-generation sequencing and cloning-based sequencing and its association with hepatocellular carcinoma progression
- (2019) Fanbiao Mei et al. JOURNAL OF MEDICAL VIROLOGY
- Characterization of hepatitis B virus X gene quasispecies complexity in mono-infection and hepatitis delta virus superinfection
- (2019) Cristina Godoy et al. WORLD JOURNAL OF GASTROENTEROLOGY
- Sequencing of human genomes with nanopore technology
- (2019) Rory Bowden et al. Nature Communications
- Illumina and Nanopore methods for whole genome sequencing of hepatitis B virus (HBV)
- (2019) Anna L. McNaughton et al. Scientific Reports
- Genomic modeling of hepatitis B virus integration frequency in the human genome
- (2019) Ondrej Podlaha et al. PLoS One
- Next generation sequencing identifies baseline viral mutants associated with treatment response to pegylated interferon in HBeAg-positive chronic hepatitis B
- (2019) Natthaya Chuaypen et al. VIRUS GENES
- RNA editing in the forefront of epitranscriptomics and human health
- (2019) Theodoulakis Christofi et al. Journal of Translational Medicine
- Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome
- (2019) Aaron M. Wenger et al. NATURE BIOTECHNOLOGY
- Stimulated phospholipid synthesis is key for hepatitis B virus replications
- (2019) Qingxia Huang et al. Scientific Reports
- The diverse functions of the hepatitis B core/capsid protein (HBc) in the viral life cycle: Implications for the development of HBc-targeting antivirals
- (2018) Ahmed Diab et al. ANTIVIRAL RESEARCH
- Next-generation sequencing technologies and their application to the study and control of bacterial infections
- (2018) J. Besser et al. CLINICAL MICROBIOLOGY AND INFECTION
- siRNA drug development against hepatitis B virus infection
- (2018) Robert Flisiak et al. EXPERT OPINION ON BIOLOGICAL THERAPY
- Update on prevention, diagnosis, and treatment of chronic hepatitis B: AASLD 2018 hepatitis B guidance
- (2018) Norah A. Terrault et al. HEPATOLOGY
- A novel orally available small molecule that inhibits hepatitis B virus expression
- (2018) Henrik Mueller et al. JOURNAL OF HEPATOLOGY
- Single molecule real-time (SMRT) sequencing comes of age: applications and utilities for medical diagnostics
- (2018) Simon Ardui et al. NUCLEIC ACIDS RESEARCH
- Early MinION™ nanopore single-molecule sequencing technology enables the characterization of hepatitis B virus genetic complexity in clinical samples
- (2018) Virginie Sauvage et al. PLoS One
- Detection of hyper-conserved regions in hepatitis B virus X gene potentially useful for gene therapy
- (2018) Carolina González et al. WORLD JOURNAL OF GASTROENTEROLOGY
- Hepatitis B virus: The challenge of an ancient virus with multiple faces and a remarkable replication strategy
- (2018) Andrea Caballero et al. ANTIVIRAL RESEARCH
- Androgen Receptor Enhances Hepatic TERT Transcription after Hepatitis B Virus Integration or Point Mutation in Promoter Region
- (2018) Chiao-Ling Li et al. HEPATOLOGY
- Altered oral microbiota in chronic hepatitis B patients with different tongue coatings
- (2018) Yu Zhao et al. WORLD JOURNAL OF GASTROENTEROLOGY
- BulkVis: a graphical viewer for Oxford nanopore bulk FAST5 files
- (2018) Alexander Payne et al. BIOINFORMATICS
- Hepatitis B virus (HBV) genome detection and genotyping in virally suppressed patients using nested polymerase chain reaction-based Sanger sequencing
- (2018) Keith CK Lau et al. DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE
- Insights From Deep Sequencing of the HBV Genome—Unique, Tiny, and Misunderstood
- (2018) Anna L. McNaughton et al. GASTROENTEROLOGY
- Serum HBV RNA: a New Potential Biomarker for Chronic Hepatitis B Virus Infection
- (2018) Shi Liu et al. HEPATOLOGY
- HBsAg seroclearance further reduces hepatocellular carcinoma risk after complete viral suppression with nucleos(t)ide analogues
- (2018) Terry Cheuk-Fung Yip et al. JOURNAL OF HEPATOLOGY
- Antimicrobial resistance prediction and phylogenetic analysis of Neisseria gonorrhoeae isolates using the Oxford Nanopore MinION sequencer
- (2018) Daniel Golparian et al. Scientific Reports
- Hepatitis B virus core antigen mutations predict post-operative prognosis of patients with primary hepatocellular carcinoma
- (2017) Jian’an Jia et al. JOURNAL OF GENERAL VIROLOGY
- How viral genetic variants and genotypes influence disease and treatment outcome of chronic hepatitis B. Time for an individualised approach?
- (2017) Neil Rajoriya et al. JOURNAL OF HEPATOLOGY
- EASL 2017 Clinical Practice Guidelines on the management of hepatitis B virus infection
- (2017) Pietro Lampertico et al. JOURNAL OF HEPATOLOGY
- Hepatocellular carcinoma-associated single-nucleotide variants and deletions identified by the use of genome-wide high-throughput analysis of hepatitis B virus
- (2017) Wen-Chun Liu et al. JOURNAL OF PATHOLOGY
- F221Y mutation in hepatitis B virus reverse transcriptase is associated with hepatocellular carcinoma prognosis following liver resection
- (2017) Huiming Li et al. Molecular Medicine Reports
- HBV DNA Integration: Molecular Mechanisms and Clinical Implications
- (2017) Thomas Tu et al. Viruses-Basel
- Comparison of error correction algorithms for Ion Torrent PGM data: application to hepatitis B virus
- (2017) Liting Song et al. Scientific Reports
- Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads
- (2017) Ryan R. Wick et al. PLoS Computational Biology
- Hepatitis B virus resistance substitutions: long-term analysis by next-generation sequencing
- (2016) Leandro R. Jones et al. ARCHIVES OF VIROLOGY
- Deep sequencing shows that HBV basal core promoter and precore variants reduce the likelihood of HBsAg loss following tenofovir disoproxil fumarate therapy in HBeAg-positive chronic hepatitis B
- (2016) Julianne Bayliss et al. GUT
- High Throughput Sequencing: An Overview of Sequencing Chemistry
- (2016) Sheetal Ambardar et al. INDIAN JOURNAL OF MICROBIOLOGY
- Mechanisms of HBV-induced hepatocellular carcinoma
- (2016) Massimo Levrero et al. JOURNAL OF HEPATOLOGY
- Single-Molecule Sequencing Reveals Complex Genome Variation of Hepatitis B Virus during 15 Years of Chronic Infection following Liver Transplantation
- (2016) B. D. Betz-Stablein et al. JOURNAL OF VIROLOGY
- 18. Delivery of CRISPR/Cas9 or TALENs Against Hepatitis B Virus cccDNA by High-Capacity Adenoviral Vectors
- (2016) Maren Schiwon et al. MOLECULAR THERAPY
- Hepatitis B virus X protein in liver tumor microenvironment
- (2016) Sha Fu et al. TUMOR BIOLOGY
- Viral quasispecies complexity measures
- (2016) Josep Gregori et al. VIROLOGY
- Clinical features of HBsAg seroclearance in hepatitis B virus carriers in South Korea: A retrospective longitudinal study
- (2016) Young Min Park et al. WORLD JOURNAL OF GASTROENTEROLOGY
- Treatment of Hepatitis B: A Concise Review
- (2016) Ruma Rajbhandari et al. Clinical and Translational Gastroenterology
- Oxford Nanopore MinION Sequencing and Genome Assembly
- (2016) Hengyun Lu et al. GENOMICS PROTEOMICS & BIOINFORMATICS
- Challenges, Solutions, and Quality Metrics of Personal Genome Assembly in Advancing Precision Medicine
- (2016) Wenming Xiao et al. Pharmaceutics
- AASLD guidelines for treatment of chronic hepatitis B
- (2015) Norah A. Terrault et al. HEPATOLOGY
- Aligning to the sample-specific reference sequence to optimize the accuracy of next-generation sequencing analysis for hepatitis B virus
- (2015) Wen-Chun Liu et al. Hepatology International
- Implementation of Next-Generation Sequencing for Hepatitis B Virus Resistance Testing and Genotyping in a Clinical Microbiology Laboratory
- (2015) Christopher F. Lowe et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Tenofovir discontinuation after long-term viral suppression in HBeAg negative chronic hepatitis B. Can HBsAg levels be useful?
- (2015) Maria Buti et al. JOURNAL OF CLINICAL VIROLOGY
- New Insights into the Evolutionary Rate of Hepatitis B Virus at Different Biological Scales
- (2015) You-Yu Lin et al. JOURNAL OF VIROLOGY
- Hepatitis B virus (HBV) DNA integration in patients with occult HBV infection and hepatocellular carcinoma
- (2015) Carlo Saitta et al. LIVER INTERNATIONAL
- Deep sequencing of hepatitis B virus basal core promoter and precore mutants in HBeAg-positive chronic hepatitis B patients
- (2015) Linlin Yan et al. Scientific Reports
- Hepatitis B Virus Genotypes and Variants
- (2015) C.-L. Lin et al. Cold Spring Harbor Perspectives in Medicine
- siRNA Versus miRNA as Therapeutics for Gene Silencing
- (2015) Jenny K W Lam et al. Molecular Therapy-Nucleic Acids
- PacBio Sequencing and Its Applications
- (2015) Anthony Rhoads et al. GENOMICS PROTEOMICS & BIOINFORMATICS
- Complex Genotype Mixtures Analyzed by Deep Sequencing in Two Different Regions of Hepatitis B Virus
- (2015) Andrea Caballero et al. PLoS One
- Next generation sequencing technology: Advances and applications
- (2014) H.P.J. Buermans et al. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE
- Fiona: a parallel and automatic strategy for read error correction
- (2014) Marcel H. Schulz et al. BIOINFORMATICS
- Clinical Application of Estimating Hepatitis B Virus Quasispecies Complexity by Massive Sequencing: Correlation between Natural Evolution and On-Treatment Evolution
- (2014) Maria Homs et al. PLoS One
- Hepatitis B virus genetic mutations and evolution in liver diseases
- (2014) Tao Shen WORLD JOURNAL OF GASTROENTEROLOGY
- Molecular identification of hepatitis B virus genotypes/subgenotypes: Revised classification hurdles and updated resolutions
- (2014) Mahmoud Reza Pourkarim WORLD JOURNAL OF GASTROENTEROLOGY
- A comparative study of ultra-deep pyrosequencing and cloning to quantitatively analyze the viral quasispecies using hepatitis B virus infection as a model
- (2013) Clara Ramírez et al. ANTIVIRAL RESEARCH
- Three-stage quality control strategies for DNA re-sequencing data
- (2013) Y. Guo et al. BRIEFINGS IN BIOINFORMATICS
- Hepatitis B virus subgenotyping: History, effects of recombination, misclassifications, and corrections
- (2013) Weifeng Shi et al. INFECTION GENETICS AND EVOLUTION
- The Influence of Hepatitis B Viral Load and Pre-S Deletion Mutations on Post-Operative Recurrence of Hepatocellular Carcinoma and the Tertiary Preventive Effects by Anti-Viral Therapy
- (2013) Chien-Wei Su et al. PLoS One
- Relationship between hepatocellular carcinoma and hepatitis B virus genotype with spontaneous YMDD mutations
- (2013) Jia-Hong Yang WORLD JOURNAL OF GASTROENTEROLOGY
- Quasispecies structure, cornerstone of hepatitis B virus infection: Mass sequencing approach
- (2013) Francisco Rodriguez-Frias WORLD JOURNAL OF GASTROENTEROLOGY
- Genotype-specific mutations in the polymerase gene of hepatitis B virus potentially associated with resistance to oral antiviral therapy
- (2012) Silvia Mirandola et al. ANTIVIRAL RESEARCH
- A tale of three next generation sequencing platforms: comparison of Ion torrent, pacific biosciences and illumina MiSeq sequencers
- (2012) Michael Quail et al. BMC GENOMICS
- A survey of error-correction methods for next-generation sequencing
- (2012) X. Yang et al. BRIEFINGS IN BIOINFORMATICS
- Pre-S Mutation Is a Significant Risk Factor for Hepatocellular Carcinoma Development: A Long-Term Retrospective Cohort Study
- (2012) Dong Hyun Sinn et al. DIGESTIVE DISEASES AND SCIENCES
- Fine mapping of hepatitis B virus pre-S deletion and its association with hepatocellular carcinoma
- (2012) Jia-Horng Kao et al. LIVER INTERNATIONAL
- Viral Quasispecies Evolution
- (2012) E. Domingo et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Ultra-Deep Pyrosequencing Detects Conserved Genomic Sites and Quantifies Linkage of Drug-Resistant Amino Acid Changes in the Hepatitis B Virus Genome
- (2012) Francisco Rodriguez-Frías et al. PLoS One
- Quasispecies dynamics in main core epitopes of hepatitis B virus by ultra-deep-pyrosequencing
- (2012) Maria Homs WORLD JOURNAL OF GASTROENTEROLOGY
- Hepatitis B virus core promoter mutations G1613A and C1653T are significantly associated with hepatocellular carcinoma in genotype C HBV-infected patients
- (2011) Masashi Tatsukawa et al. BMC CANCER
- The clinical implications of hepatitis B virus genotype: Recent advances
- (2011) Chih-Lin Lin et al. JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY
- Nucleotide change of codon 182 in the surface gene of hepatitis B virus genotype C leading to truncated surface protein is associated with progression of liver diseases
- (2011) Seoung-Ae Lee et al. JOURNAL OF HEPATOLOGY
- Ultra-deep pyrosequencing analysis of the hepatitis B virus preCore region and main catalytic motif of the viral polymerase in the same viral genome
- (2011) M. Homs et al. NUCLEIC ACIDS RESEARCH
- Hepatitis B virus genotyping: current methods and clinical implications
- (2010) Bassem S.S. Guirgis et al. INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES
- Mutation pattern of lamivudine resistance in relation to hepatitis B genotypes: Hepatitis B genotypes differ in their lamivudine resistance associated mutation pattern
- (2010) Hans Damerow et al. JOURNAL OF MEDICAL VIROLOGY
- Massive APOBEC3 Editing of Hepatitis B Viral DNA in Cirrhosis
- (2010) Jean-Pierre Vartanian et al. PLoS Pathogens
- Characterization of potential antiviral resistance mutations in hepatitis B virus reverse transcriptase sequences in treatment-naïve Chinese patients
- (2009) Bao-Ming Liu et al. ANTIVIRAL RESEARCH
- Ultra‐Deep Pyrosequencing of Hepatitis B Virus Quasispecies from Nucleoside and Nucleotide Reverse‐Transcriptase Inhibitor (NRTI)–Treated Patients and NRTI‐Naive Patients
- (2009) Severine Margeridon‐Thermet et al. JOURNAL OF INFECTIOUS DISEASES
- Use of Massively Parallel Ultradeep Pyrosequencing To Characterize the Genetic Diversity of Hepatitis B Virus in Drug-Resistant and Drug-Naive Patients and To Detect Minor Variants in Reverse Transcriptase and Hepatitis B S Antigen
- (2008) M. Solmone et al. JOURNAL OF VIROLOGY
- Accurate whole human genome sequencing using reversible terminator chemistry
- (2008) David R. Bentley et al. NATURE
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