Stable high-density and maternally inherited Wolbachia infections in Anopheles moucheti and Anopheles demeilloni mosquitoes

Evidence for natural hybridization and novel Wolbachia strain superinfections in the Anopheles gambiae complex from Guinea

(2021) Claire L. Jeffries et al.   Royal Society Open Science

An elusive endosymbiont: Does Wolbachia occur naturally in Aedes aegypti ?

(2020) Perran A. Ross et al.   Ecology and Evolution

Efficient production of male Wolbachia-infected Aedes aegypti mosquitoes enables large-scale suppression of wild populations

(2020) Jacob E. Crawford et al.   NATURE BIOTECHNOLOGY

Natural Wolbachia infection in field-collected Anopheles and other mosquito species from Malaysia

(2020) Meng Li Wong et al.   Parasites & Vectors

Life and Death of Selfish Genes: Comparative Genomics Reveals the Dynamic Evolution of Cytoplasmic Incompatibility

(2020) Julien Martinez et al.   MOLECULAR BIOLOGY AND EVOLUTION

Evaluating insecticide resistance across African districts to aid malaria control decisions

(2020) Catherine L. Moyes et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Anopheles coluzzii microbiome and its interaction with the intracellular parasite Wolbachia

(2020) Timothy J. Straub et al.   Scientific Reports

Natural Wolbachia infections are common in the major malaria vectors in Central Africa

(2019) Diego Ayala et al.   Evolutionary Applications

Incompatible and sterile insect techniques combined eliminate mosquitoes

(2019) Xiaoying Zheng et al.   NATURE

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Is Anopheles gambiae a Natural Host of Wolbachia?

(2019) Ewa Chrostek et al.   mBio

Establishment of Wolbachia Strain wAlbB in Malaysian Populations of Aedes aegypti for Dengue Control

(2019) Wasi A. Nazni et al.   CURRENT BIOLOGY

Evolutionary Genetics of Cytoplasmic Incompatibility Genes cifA and cifB in Prophage WO of Wolbachia

(2018) Amelia R I Lindsey et al.   Genome Biology and Evolution

A Completely Reimplemented MPI Bioinformatics Toolkit with a New HHpred Server at its Core

(2018) Lukas Zimmermann et al.   JOURNAL OF MOLECULAR BIOLOGY

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

One prophage WO gene rescues cytoplasmic incompatibility inDrosophila melanogaster

(2018) J. Dylan Shropshire et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

OUP accepted manuscript

(2018)   TRANSACTIONS OF THE ROYAL SOCIETY OF TROPICAL MEDICINE AND HYGIENE

Culex pipiens crossing type diversity is governed by an amplified and polymorphic operon of Wolbachia

(2018) Manon Bonneau et al.   Nature Communications

Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin

(2018) Nicholas A. Bokulich et al.   Microbiome

Changes in malaria vector bionomics and transmission patterns in the equatorial forest region of Cameroon between 2000 and 2017

(2018) Roland Bamou et al.   Parasites & Vectors

A bioinformatics approach to identifying Wolbachia infections in arthropods

(2018) Jane Pascar et al.   PeerJ

First report of natural Wolbachia infection in wild Anopheles funestus population in Senegal

(2018) El Hadji Amadou Niang et al.   MALARIA JOURNAL

First report of natural Wolbachia infection in the malaria mosquito Anopheles arabiensis in Tanzania

(2018) Francesco Baldini et al.   Parasites & Vectors

High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries

(2018) Chirag Jain et al.   Nature Communications

Genetic diversity of the African malaria vector Anopheles gambiae

(2017) Alistair Miles et al.   NATURE

Prophage WO genes recapitulate and enhance Wolbachia-induced cytoplasmic incompatibility

(2017) Daniel P. LePage et al.   NATURE

Effect of naturally occurringWolbachiainAnopheles gambiae s.l.mosquitoes from Mali onPlasmodium falciparummalaria transmission

(2017) Fabio M. Gomes et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Wolbachia deubiquitylating enzyme induces cytoplasmic incompatibility

(2017) John F. Beckmann et al.   Nature Microbiology

Molecular Characterization Reveals Diverse and Unknown Malaria Vectors in the Western Kenyan Highlands

(2016) Brandyce St. Laurent et al.   AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Wolbachia infections in natural Anopheles populations affect egg laying and negatively correlate with Plasmodium development

(2016) W. Robert Shaw et al.   Nature Communications

Eukaryotic association module in phage WO genomes from Wolbachia

(2016) Sarah R. Bordenstein et al.   Nature Communications

Establishment of a Wolbachia Superinfection in Aedes aegypti Mosquitoes as a Potential Approach for Future Resistance Management

(2016) D. Albert Joubert et al.   PLoS Pathogens

Relic DNA is abundant in soil and obscures estimates of soil microbial diversity

(2016) Paul Carini et al.   Nature Microbiology

MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

(2015) Dinghua Li et al.   BIOINFORMATICS

MetaQUAST: evaluation of metagenome assemblies

(2015) Alla Mikheenko et al.   BIOINFORMATICS

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

(2015) Donovan H. Parks et al.   GENOME RESEARCH

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

VectorBase: an updated bioinformatics resource for invertebrate vectors and other organisms related with human diseases

(2014) Gloria I. Giraldo-Calderón et al.   NUCLEIC ACIDS RESEARCH

Wolbachia strain wAlbB confers both fitness costs and benefit on Anopheles stephensi

(2014) Deepak Joshi et al.   Parasites & Vectors

Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement

(2014) Bruce J. Walker et al.   PLoS One

Native microbiome impedes vertical transmission of Wolbachia in Anopheles mosquitoes

(2014) G. L. Hughes et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evidence of natural Wolbachia infections in field populations of Anopheles gambiae

(2014) Francesco Baldini et al.   Nature Communications

Wolbachia Enhances West Nile Virus (WNV) Infection in the Mosquito Culex tarsalis

(2014) Brittany L. Dodson et al.   PLoS Neglected Tropical Diseases

Transinfection: a method to investigateWolbachia-host interactions and control arthropod-borne disease

(2013) G. L. Hughes et al.   INSECT MOLECULAR BIOLOGY

Wolbachia Invades Anopheles stephensi Populations and Induces Refractoriness to Plasmodium Infection

(2013) G. Bian et al.   SCIENCE

Comparative Genomics of Wolbachia and the Bacterial Species Concept

(2013) Kirsten Maren Ellegaard et al.   PLoS Genetics

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Invasion of Wolbachia into Anopheles and Other Insect Germlines in an Ex vivo Organ Culture System

(2012) Grant L. Hughes et al.   PLoS One

Wolbachia Strain wAlbB Enhances Infection by the Rodent Malaria Parasite Plasmodium berghei in Anopheles gambiae Mosquitoes

(2011) Grant L. Hughes et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons

(2011) Nabil-Fareed Alikhan et al.   BMC GENOMICS

Can Wolbachia be used to control malaria?

(2011) Thomas Walker et al.   MEMORIAS DO INSTITUTO OSWALDO CRUZ

The wMel Wolbachia strain blocks dengue and invades caged Aedes aegypti populations

(2011) T. Walker et al.   NATURE

Successful establishment of Wolbachia in Aedes populations to suppress dengue transmission

(2011) A. A. Hoffmann et al.   NATURE

Wolbachia Infections Are Virulent and Inhibit the Human Malaria Parasite Plasmodium Falciparum in Anopheles Gambiae

(2011) Grant L. Hughes et al.   PLoS Pathogens

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Population genetic structure of the malaria vector Anopheles nili in sub-Saharan Africa

(2010) Cyrille Ndo et al.   MALARIA JOURNAL

Reordering contigs of draft genomes using the Mauve Aligner

(2009) Anna I. Rissman et al.   BIOINFORMATICS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Stable Introduction of a Life-Shortening Wolbachia Infection into the Mosquito Aedes aegypti

(2009) C. J. McMeniman et al.   SCIENCE

Host Adaptation of a Wolbachia Strain after Long-Term Serial Passage in Mosquito Cell Lines

(2008) C. J. McMeniman et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Population structure of the malaria vector Anopheles moucheti in the equatorial forest region of Africa

(2008) Christophe Antonio-Nkondjio et al.   MALARIA JOURNAL