Genome-wide detection of CNV regions and their potential association with growth and fatness traits in Duroc pigs

A meta-analysis of genome-wide association studies for average daily gain and lean meat percentage in two Duroc pig populations

(2021) Shenping Zhou et al.   BMC GENOMICS

Functional and population genetic features of copy number variations in two dairy cattle populations

(2020) Young-Lim Lee et al.   BMC GENOMICS

Genome-wide association analyses identify known and novel loci for teat number in Duroc pigs using single-locus and multi-locus models

(2020) Zhanwei Zhuang et al.   BMC GENOMICS

CNV analysis of Meishan pig by next-generation sequencing and effects of AHR gene CNV on pig reproductive traits

(2020) Xianrui Zheng et al.   Journal of Animal Science and Biotechnology

Probe-based association analysis identifies several deletions associated with average daily gain in beef cattle

(2019) Lingyang Xu et al.   BMC GENOMICS

A genome-wide single nucleotide polymorphism and copy number variation analysis for number of piglets born alive

(2019) Nedenia Bonvino Stafuzza et al.   BMC GENOMICS

Genome-Wide Association Study Reveals Candidate Genes for Growth Relevant Traits in Pigs

(2019) Zhenshuang Tang et al.   Frontiers in Genetics

Single-Locus and Multi-Locus Genome-Wide Association Studies for Intramuscular Fat in Duroc Pigs

(2019) Rongrong Ding et al.   Frontiers in Genetics

Detection and analysis of genome‐wide copy number variation in the pig genome using an 80 K SNP Beadchip

(2019) Yuan Wang et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

An Evolutionary Perspective on the Impact of Genomic Copy Number Variation on Human Health

(2019) Marie Saitou et al.   JOURNAL OF MOLECULAR EVOLUTION

A Survey of Copy Number Variation in the Porcine Genome Detected From Whole-Genome Sequence

(2019) Brittney N. Keel et al.   Frontiers in Genetics

Ensembl 2020

(2019) Andrew D Yates et al.   NUCLEIC ACIDS RESEARCH

SNP genotypes reveal breed substructure, selection signatures and highly inbred regions in Piétrain pigs

(2019) W. Gorssen et al.   ANIMAL GENETICS

Copy number variations of MTHFSD gene across pig breeds and its association with litter size traits in Chinese indigenous Xiang pig

(2018) Xue-Qin Ran et al.   JOURNAL OF ANIMAL PHYSIOLOGY AND ANIMAL NUTRITION

Using genome wide association studies to identify common QTL regions in three different genetic backgrounds based on Iberian pig breed

(2018) Ángel M. Martínez-Montes et al.   PLoS One

Genetic Architecture of Feeding Behavior and Feed Efficiency in a Duroc Pig Population

(2018) Rongrong Ding et al.   Frontiers in Genetics

The NHGRI-EBI GWAS Catalog of published genome-wide association studies, targeted arrays and summary statistics 2019

(2018) Annalisa Buniello et al.   NUCLEIC ACIDS RESEARCH

A global analysis of CNVs in swine using whole genome sequence data and association analysis with fatty acid composition and growth traits

(2017) Manuel Revilla et al.   PLoS One

Genome-wide analysis reveals differential selection involved with copy number variation in diverse Chinese Cattle

(2017) Liu Yang et al.   Scientific Reports

Distribution and Functionality of Copy Number Variation across European Cattle Populations

(2017) Maulik Upadhyay et al.   Frontiers in Genetics

Genome-Wide Association Study of Piglet Uniformity and Farrowing Interval

(2017) Yuan Wang et al.   Frontiers in Genetics

A genome-wide association study of copy number variations with umbilical hernia in swine

(2016) Yi Long et al.   ANIMAL GENETICS

Skin Adipocyte Stem Cell Self-Renewal Is Regulated by a PDGFA/AKT-Signaling Axis

(2016) Guillermo C. Rivera-Gonzalez et al.   Cell Stem Cell

The relationship between adipocyte size and the transcript levels of SNAP23 , BSCL2 and COPA genes in pigs

(2016) Beata Kociucka et al.   MEAT SCIENCE

Detection of four polymorphisms in 5′ upstream region of PNPLA2 gene and their associations with economic traits in pigs

(2016) Lihe Dai et al.   MOLECULAR BIOLOGY REPORTS

High-resolution copy number variation analysis of schizophrenia in Japan

(2016) I Kushima et al.   MOLECULAR PSYCHIATRY

Genetic drift, selection and the evolution of the mutation rate

(2016) Michael Lynch et al.   NATURE REVIEWS GENETICS

CNV analysis and mutation screening indicate an important role for theNPY4Rgene in human obesity

(2016) Evi Aerts et al.   Obesity

Identification of Copy Number Variations in Xiang and Kele Pigs

(2016) Jian Xie et al.   PLoS One

Copy number variation detection using SNP genotyping arrays in three Chinese pig breeds

(2015) K. Dong et al.   ANIMAL GENETICS

PDGFRα signaling drives adipose tissue fibrosis by targeting progenitor cell plasticity

(2015) Tomoaki Iwayama et al.   GENES & DEVELOPMENT

A copy number variation map of the human genome

(2015) Mehdi Zarrei et al.   NATURE REVIEWS GENETICS

Genome-Wide Copy Number Variations Using SNP Genotyping in a Mixed Breed Swine Population

(2015) Ralph T. Wiedmann et al.   PLoS One

PDGFRβ signalling regulates local inflammation and synergizes with hypercholesterolaemia to promote atherosclerosis

(2015) Chaoyong He et al.   Nature Communications

Improved Detection and Characterization of Copy Number Variations Among Diverse Pig Breeds by Array CGH

(2015) J. Wang et al.   G3-Genes Genomes Genetics

Second-generation PLINK: rising to the challenge of larger and richer datasets

(2015) Christopher C Chang et al.   GigaScience

Identification of Low-Confidence Regions in the Pig Reference Genome (Sscrofa10.2)

(2015) Amanda Warr et al.   Frontiers in Genetics

Analysis of Genome-Wide Copy Number Variations in Chinese Indigenous and Western Pig Breeds by 60 K SNP Genotyping Arrays

(2014) Yanan Wang et al.   PLoS One

Genome-wide detection of copy number variations using high-density SNP genotyping platforms in Holsteins

(2013) Li Jiang et al.   BMC GENOMICS

GPER Deficiency in Male Mice Results in Insulin Resistance, Dyslipidemia, and a Proinflammatory State

(2013) Geetanjali Sharma et al.   ENDOCRINOLOGY

The Database of Genomic Variants: a curated collection of structural variation in the human genome

(2013) Jeffrey R. MacDonald et al.   NUCLEIC ACIDS RESEARCH

CNVRuler: a copy number variation-based case–control association analysis tool

(2012) Ji-Hong Kim et al.   BIOINFORMATICS

A comprehensive survey of copy number variation in 18 diverse pig populations and identification of candidate copy number variable genes associated with complex traits

(2012) Congying Chen et al.   BMC GENOMICS

Seipin: from human disease to molecular mechanism

(2012) Bethany R. Cartwright et al.   JOURNAL OF LIPID RESEARCH

Genome-wide efficient mixed-model analysis for association studies

(2012) Xiang Zhou et al.   NATURE GENETICS

Strong signatures of selection in the domestic pig genome

(2012) C.-J. Rubin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Adipose tissue remodeling and obesity

(2011) Kai Sun et al.   JOURNAL OF CLINICAL INVESTIGATION

KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases

(2011) Chen Xie et al.   NUCLEIC ACIDS RESEARCH

GCTA: A Tool for Genome-wide Complex Trait Analysis

(2010) Jian Yang et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Structural Variation in the Human Genome and its Role in Disease

(2010) Paweł Stankiewicz et al.   Annual Review of Medicine

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

A genome-wide survey of copy number variations in Han Chinese residing in Taiwan

(2009) Chien-Hsing Lin et al.   GENOMICS

Finding the missing heritability of complex diseases

(2009) Teri A. Manolio et al.   NATURE

Design of a High Density SNP Genotyping Assay in the Pig Using SNPs Identified and Characterized by Next Generation Sequencing Technology

(2009) Antonio M. Ramos et al.   PLoS One

GPR30/GPER1: searching for a role in estrogen physiology

(2009) Björn Olde et al.   TRENDS IN ENDOCRINOLOGY AND METABOLISM

How to Interpret a Genome-wide Association Study

(2008) Thomas A. Pearson   JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION

Personal genomes: The case of the missing heritability

(2008) Brendan Maher   NATURE

Adjustment of genomic waves in signal intensities from whole-genome SNP genotyping platforms

(2008) Sharon J. Diskin et al.   NUCLEIC ACIDS RESEARCH