Soil Metagenomics Reveals Effects of Continuous Sugarcane Cropping on the Structure and Functional Pathway of Rhizospheric Microbial Community

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(2019) Xin Sui et al.   Scientific Reports

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(2017) Ze Ren et al.   Scientific Reports

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(2015) Pablo R. Hardoim et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

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(2015) Wu Xiong et al.   PLoS One

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(2015) Acacio Aparecido Navarrete et al.   PLoS One

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(2014) Jie Tang et al.   ANNALS OF MICROBIOLOGY

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(2014) Wu Xiong et al.   MICROBIAL ECOLOGY

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(2014) Xiao-gang Li et al.   SOIL BIOLOGY & BIOCHEMISTRY

Root exudates mediated interactions belowground

(2014) Feth el Zahar Haichar et al.   SOIL BIOLOGY & BIOCHEMISTRY

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(2013) Wenxiong Lin et al.   BMC MICROBIOLOGY

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(2013) Weiren Cui et al.   Molecular BioSystems

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(2013) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

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(2013) Dayakar V. Badri et al.   NEW PHYTOLOGIST

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(2013) Vincent Lombard et al.   NUCLEIC ACIDS RESEARCH

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(2013) Caio T. C. C. Rachid et al.   PLoS One

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(2013) J. A. Peiffer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

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(2012) Rosinei Aparecida Souza et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

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The rhizosphere microbiome and plant health

(2012) Roeland L. Berendsen et al.   TRENDS IN PLANT SCIENCE

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(2011) Eiko E. Kuramae et al.   FEMS MICROBIOLOGY ECOLOGY

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Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

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Taxa-specific changes in soil microbial community composition induced by pyrogenic carbon amendments

(2010) Christina L.M. Khodadad et al.   SOIL BIOLOGY & BIOCHEMISTRY

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(2009) T. R. T. Dagenais et al.   CLINICAL MICROBIOLOGY REVIEWS

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(2008) Marcel G. A. van der Heijden et al.   ECOLOGY LETTERS

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