Comparison between 16S rRNA and shotgun sequencing data for the taxonomic characterization of the gut microbiota
出版年份 2021 全文链接
标题
Comparison between 16S rRNA and shotgun sequencing data for the taxonomic characterization of the gut microbiota
作者
关键词
-
出版物
Scientific Reports
Volume 11, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2021-02-04
DOI
10.1038/s41598-021-82726-y
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Effect of Lactobacillus acidophilus D2/CSL (CECT 4529) supplementation in drinking water on chicken crop and caeca microbiome
- (2020) Alessandra De Cesare et al. PLoS One
- Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage
- (2019) Rene S. Hendriksen et al. Nature Communications
- Clinical metagenomics
- (2019) Charles Y. Chiu et al. NATURE REVIEWS GENETICS
- Impact of a probiotic-based cleaning product on the microbiological profile of broiler litters and chicken caeca microbiota
- (2019) Alessandra De Cesare et al. POULTRY SCIENCE
- Taxonomy of anaerobic digestion microbiome reveals biases associated with the applied high throughput sequencing strategies
- (2018) Stefano Campanaro et al. Scientific Reports
- Importance of gut microbiota in obesity
- (2018) Isabel Cornejo-Pareja et al. EUROPEAN JOURNAL OF CLINICAL NUTRITION
- Contamination in Low Microbial Biomass Microbiome Studies: Issues and Recommendations
- (2018) Raphael Eisenhofer et al. TRENDS IN MICROBIOLOGY
- Exact sequence variants should replace operational taxonomic units in marker-gene data analysis
- (2017) Benjamin J Callahan et al. ISME Journal
- Large-scale differences in microbial biodiversity discovery between 16S amplicon and shotgun sequencing
- (2017) Michael Tessler et al. Scientific Reports
- The metagenomic data life-cycle: standards and best practices
- (2017) Petra ten Hoopen et al. GigaScience
- Effect of dietary supplementation with Lactobacillus acidophilus D2/CSL (CECT 4529) on caecum microbioma and productive performance in broiler chickens
- (2017) Alessandra De Cesare et al. PLoS One
- Stochastic neutral modelling of the Gut Microbiota’s relative species abundance from next generation sequencing data
- (2016) Claudia Sala et al. BMC BIOINFORMATICS
- 16S rRNA gene sequencing of mock microbial populations- impact of DNA extraction method, primer choice and sequencing platform
- (2016) Fiona Fouhy et al. BMC MICROBIOLOGY
- Metagenomic Analysis of Chicken Gut Microbiota for Improving Metabolism and Health of Chickens — A Review
- (2015) Ki Young Choi et al. ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES
- Microbiota of the chicken gastrointestinal tract: influence on health, productivity and disease
- (2014) Dragana Stanley et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform
- (2013) James J. Kozich et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Ribosomal Database Project: data and tools for high throughput rRNA analysis
- (2013) James R. Cole et al. NUCLEIC ACIDS RESEARCH
- phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
- (2013) Paul J. McMurdie et al. PLoS One
- Genomic approaches to studying the human microbiota
- (2012) George M. Weinstock NATURE
- The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
- (2012) Christian Quast et al. NUCLEIC ACIDS RESEARCH
- Functional Metagenomics: Recent Advances and Future Challenges
- (2011) Ludmila Chistoserdova Biotechnology & Genetic Engineering Reviews
- Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis
- (2011) Matthew B. Scholz et al. CURRENT OPINION IN BIOTECHNOLOGY
- Metagenomics: Key to Human Gut Microbiota
- (2011) Simone Maccaferri et al. DIGESTIVE DISEASES
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