Active and total microbial communities in forest soil are largely different and highly stratified during decomposition

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Disruption of root carbon transport into forest humus stimulates fungal opportunists at the expense of mycorrhizal fungi

(2010) Björn D Lindahl et al.   ISME Journal

Soil bacterial and fungal communities across a pH gradient in an arable soil

(2010) Johannes Rousk et al.   ISME Journal

Phylogenetic similarity and structure of Agaricomycotina communities across a forested landscape

(2010) IVAN P. EDWARDS et al.   MOLECULAR ECOLOGY

Genome sequence of the model mushroom Schizophyllum commune

(2010) Robin A Ohm et al.   NATURE BIOTECHNOLOGY

Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions

(2010) Jens Reeder et al.   NATURE METHODS

Production of ectomycorrhizal mycelium peaks during canopy closure in Norway spruce forests

(2010) Håkan Wallander et al.   NEW PHYTOLOGIST

454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases

(2010) Leho Tedersoo et al.   NEW PHYTOLOGIST

Effects of soil properties and management on the activity of soil organic matter transforming enzymes and the quantification of soil-bound and free activity

(2010) Martina Štursová et al.   PLANT AND SOIL

Fungi Unearthed: Transcripts Encoding Lignocellulolytic and Chitinolytic Enzymes in Forest Soil

(2010) Harald Kellner et al.   PLoS One

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils

(2009) N. L. Ward et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Testing the functional significance of microbial community composition

(2009) Michael S. Strickland et al.   ECOLOGY

Termination of belowground C allocation by trees alters soil fungal and bacterial communities in a boreal forest

(2009) Stephanie A. Yarwood et al.   FEMS MICROBIOLOGY ECOLOGY

A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses

(2009) Ryan T Jones et al.   ISME Journal

454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity

(2009) M. Buée et al.   NEW PHYTOLOGIST

Microbial communities and their relevance for ecosystem models: Decomposition as a case study

(2009) Krista L. McGuire et al.   SOIL BIOLOGY & BIOCHEMISTRY

Biological crusts as a model system for examining the biodiversity–ecosystem function relationship in soils

(2009) Matthew A. Bowker et al.   SOIL BIOLOGY & BIOCHEMISTRY

Characterization of Denitrification Gene Clusters of Soil Bacteria via a Metagenomic Approach

(2008) S. Demaneche et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Isolation of Fungal Cellobiohydrolase I Genes from Sporocarps and Forest Soils by PCR

(2008) I. P. Edwards et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Evaluation of the bacterial diversity in the feces of cattle using 16S rDNA bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP)

(2008) Scot E Dowd et al.   BMC MICROBIOLOGY

Distantly sampled soils carry few species in common

(2008) Roberta R Fulthorpe et al.   ISME Journal

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

(2008) J. R. Cole et al.   NUCLEIC ACIDS RESEARCH

Simultaneous Assessment of Soil Microbial Community Structure and Function through Analysis of the Meta-Transcriptome

(2008) Tim Urich et al.   PLoS One

Spatial variability of enzyme activities and microbial biomass in the upper layers of Quercus petraea forest soil

(2008) Jaroslav Šnajdr et al.   SOIL BIOLOGY & BIOCHEMISTRY