Conserved pleiotropy of an ancient plant homeobox gene uncovered by cis-regulatory dissection
出版年份 2021 全文链接
标题
Conserved pleiotropy of an ancient plant homeobox gene uncovered by cis-regulatory dissection
作者
关键词
pleiotropy, plant development, Brassicaceae, Solanaceae, tomato, inflorescence, Arabidopsis, homeobox, cis-, regulatory, ATAC sequencing, conserved non-coding sequences
出版物
CELL
Volume -, Issue -, Pages -
出版商
Elsevier BV
发表日期
2021-03-06
DOI
10.1016/j.cell.2021.02.001
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- A WOX/Auxin Biosynthesis Module Controls Growth to Shape Leaf Form
- (2020) Zhongjuan Zhang et al. CURRENT BIOLOGY
- Dense and pleiotropic regulatory information in a developmental enhancer
- (2020) Timothy Fuqua et al. NATURE
- Development of plant regeneration and Agrobacterium tumefaciens-mediated transformation methodology for Physalis pruinosa
- (2019) Kerry Swartwood et al. PLANT CELL TISSUE AND ORGAN CULTURE
- CRISPR/Cas Genome Editing and Precision Plant Breeding in Agriculture
- (2019) Kunling Chen et al. Annual Review of Plant Biology
- Genome-wide identification and analysis of the WUSCHEL-related homeobox (WOX) gene family in allotetraploid Brassica napus reveals changes in WOX genes during polyploidization
- (2019) Mengdi Li et al. BMC GENOMICS
- Base Editing in Crops: Current Advances, Limitations, and Future Implications
- (2019) Rukmini Mishra et al. PLANT BIOTECHNOLOGY JOURNAL
- Challenges of Translating Gene Regulatory Information into Agronomic Improvements
- (2019) Nathan Springer et al. TRENDS IN PLANT SCIENCE
- Arabidopsis SWR1-associated protein methyl-CpG-binding domain 9 is required for histone H2A.Z deposition
- (2019) Magdalena E. Potok et al. Nature Communications
- Evolution, Initiation, and Diversity in Early Plant Embryogenesis
- (2019) Tatyana Radoeva et al. DEVELOPMENTAL CELL
- Revolutions in agriculture chart a course for targeted breeding of old and new crops
- (2019) Yuval Eshed et al. SCIENCE
- Large-scale phylogenomic analysis suggests three ancient superclades of the WUSCHEL-RELATED HOMEOBOX transcription factor family in plants
- (2019) Cheng-Chiang Wu et al. PLoS One
- ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R
- (2018) Emmanuel Paradis et al. BIOINFORMATICS
- Towards a more predictable plant breeding pipeline with CRISPR/Cas-induced allelic series to optimize quantitative and qualitative traits
- (2018) Armin Scheben et al. CURRENT OPINION IN PLANT BIOLOGY
- Renewing Felsenstein’s phylogenetic bootstrap in the era of big data
- (2018) F. Lemoine et al. NATURE
- Genome sequence of M6, a diploid inbred clone of the high-glycoalkaloid-producing tuber-bearing potato species Solanum chacoense , reveals residual heterozygosity
- (2018) Courtney P. Leisner et al. PLANT JOURNAL
- HEAD LESS, a WUSCHEL homologue, uncovers novel aspects of shoot meristem regulation and leaf blade development in Medicago truncatula
- (2018) Yingying Meng et al. JOURNAL OF EXPERIMENTAL BOTANY
- PlantPAN3.0: a new and updated resource for reconstructing transcriptional regulatory networks from ChIP-seq experiments in plants
- (2018) Chi-Nga Chow et al. NUCLEIC ACIDS RESEARCH
- LEAF LATERAL SYMMETRY1, a Member of the WUSCHEL-RELATED HOMEOBOX3 Gene Family, Regulates Lateral Organ Development Differentially from Other Paralogs, NARROW LEAF2 and NARROW LEAF3 in Rice
- (2017) Eriko Honda et al. PLANT AND CELL PHYSIOLOGY
- Increased efficiency of targeted mutagenesis by CRISPR/Cas9 in plants using heat stress
- (2017) Chantal LeBlanc et al. PLANT JOURNAL
- Estimating the Effective Sample Size of Tree Topologies from Bayesian Phylogenetic Analyses
- (2016) Robert Lanfear et al. Genome Biology and Evolution
- The evolution of inflorescence diversity in the nightshades and heterochrony during meristem maturation
- (2016) Zachary H. Lemmon et al. GENOME RESEARCH
- Stem Cell Regulation by Arabidopsis WOX Genes
- (2016) Alicja Dolzblasz et al. Molecular Plant
- A plethora of pleiotropy across complex traits
- (2016) Peter M Visscher et al. NATURE GENETICS
- deepTools2: a next generation web server for deep-sequencing data analysis
- (2016) Fidel Ramírez et al. NUCLEIC ACIDS RESEARCH
- New genes from old: asymmetric divergence of gene duplicates and the evolution of development
- (2016) Peter W. H. Holland et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- A Collection of Conserved Non-Coding Sequences to Study Gene Regulation in Flowering Plants
- (2016) Jan Van de Velde et al. PLANT PHYSIOLOGY
- Evolution of gene duplication in plants
- (2016) Nicholas Panchy et al. PLANT PHYSIOLOGY
- Lessons from Domestication: Targeting Cis -Regulatory Elements for Crop Improvement
- (2016) Gwen Swinnen et al. TRENDS IN PLANT SCIENCE
- The detection and characterization of pleiotropy: discovery, progress, and promise
- (2015) Anna L. Tyler et al. BRIEFINGS IN BIOINFORMATICS
- The WRKY Transcription Factor WRKY71/EXB1 Controls Shoot Branching by Transcriptionally RegulatingRAXGenes in Arabidopsis
- (2015) Dongshu Guo et al. PLANT CELL
- Axillary Meristem Formation in Rice Requires theWUSCHELOrthologTILLERS ABSENT1
- (2015) Wakana Tanaka et al. PLANT CELL
- The role of WOX genes in flower development
- (2014) Enrico Costanzo et al. ANNALS OF BOTANY
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- MafFilter: a highly flexible and extensible multiple genome alignment files processor
- (2014) Julien Y Dutheil et al. BMC GENOMICS
- The architecture of gene expression: integrating dispersed cis-regulatory modules into coherent regulatory domains
- (2014) Wibke Schwarzer et al. CURRENT OPINION IN GENETICS & DEVELOPMENT
- WUSCHEL-RELATED HOMEOBOX 8/9 is important for proper embryo patterning in the gymnosperm Norway spruce
- (2014) Tianqing Zhu et al. JOURNAL OF EXPERIMENTAL BOTANY
- Capsicum annuum S(CaS) promotes reproductive transition and is required for flower formation in pepper (Capsicum annuum)
- (2014) Oded Cohen et al. NEW PHYTOLOGIST
- Efficient Gene Editing in Tomato in the First Generation Using the Clustered Regularly Interspaced Short Palindromic Repeats/CRISPR-Associated9 System
- (2014) C. Brooks et al. PLANT PHYSIOLOGY
- Origins and Evolution of WUSCHEL-Related Homeobox Protein Family in Plant Kingdom
- (2014) Gaibin Lian et al. TheScientificWorldJOURNAL
- DWARF TILLER1, a WUSCHEL-Related Homeobox Transcription Factor, Is Required for Tiller Growth in Rice
- (2014) Wenfei Wang et al. PLoS Genetics
- Meristem maturation and inflorescence architecture—lessons from the Solanaceae
- (2013) Soon Ju Park et al. CURRENT OPINION IN PLANT BIOLOGY
- Control of grass inflorescence form by the fine-tuning of meristem phase change
- (2013) Junko Kyozuka et al. CURRENT OPINION IN PLANT BIOLOGY
- Conserved non-coding elements and cis regulation: actions speak louder than words
- (2013) A. C. Nelson et al. DEVELOPMENT
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Evaluation of methods for modeling transcription factor sequence specificity
- (2013) Matthew T Weirauch et al. NATURE BIOTECHNOLOGY
- Evolution of crop species: genetics of domestication and diversification
- (2013) Rachel S. Meyer et al. NATURE REVIEWS GENETICS
- Pleiotropy in complex traits: challenges and strategies
- (2013) Nadia Solovieff et al. NATURE REVIEWS GENETICS
- Plant genome editing made easy: targeted mutagenesis in model and crop plants using the CRISPR/Cas system
- (2013) Khaoula Belhaj et al. Plant Methods
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- Evolutionarily conserved repressive activity of WOX proteins mediates leaf blade outgrowth and floral organ development in plants
- (2012) H. Lin et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The many faces of pleiotropy
- (2012) Annalise B. Paaby et al. TRENDS IN GENETICS
- FIMO: scanning for occurrences of a given motif
- (2011) Charles E. Grant et al. BIOINFORMATICS
- THE QTN PROGRAM AND THE ALLELES THAT MATTER FOR EVOLUTION: ALL THAT'S GOLD DOES NOT GLITTER
- (2011) Matthew V. Rockman EVOLUTION
- The pleiotropic structure of the genotype–phenotype map: the evolvability of complex organisms
- (2011) Günter P. Wagner et al. NATURE REVIEWS GENETICS
- Cis-regulatory elements: molecular mechanisms and evolutionary processes underlying divergence
- (2011) Patricia J. Wittkopp et al. NATURE REVIEWS GENETICS
- A Modular Cloning System for Standardized Assembly of Multigene Constructs
- (2011) Ernst Weber et al. PLoS One
- Rate of meristem maturation determines inflorescence architecture in tomato
- (2011) S. J. Park et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- One Hundred Years of Pleiotropy: A Retrospective
- (2010) F. W. Stearns GENETICS
- Genomic patterns of pleiotropy and the evolution of complexity
- (2010) Z. Wang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- WRKY transcription factors
- (2010) Paul J. Rushton et al. TRENDS IN PLANT SCIENCE
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- cis-Regulatory elements in plant cell signaling
- (2009) Henry D Priest et al. CURRENT OPINION IN PLANT BIOLOGY
- Flexibility of transcription factor target site position in conserved cis-regulatory modules
- (2009) R. Andrew Cameron et al. DEVELOPMENTAL BIOLOGY
- Twenty years on: The inner workings of the shoot apical meristem, a developmental dynamo
- (2009) M.K. Barton DEVELOPMENTAL BIOLOGY
- Detection of nonneutral substitution rates on mammalian phylogenies
- (2009) K. S. Pollard et al. GENOME RESEARCH
- Deep homology and the origins of evolutionary novelty
- (2009) Neil Shubin et al. NATURE
- MEME SUITE: tools for motif discovery and searching
- (2009) T. L. Bailey et al. NUCLEIC ACIDS RESEARCH
- Genes of the most conserved WOX clade in plants affect root and flower development in Arabidopsis
- (2008) Yves Deveaux et al. BMC EVOLUTIONARY BIOLOGY
- Role of EVERGREEN in the Development of the Cymose Petunia Inflorescence
- (2008) Alexandra B. Rebocho et al. DEVELOPMENTAL CELL
- Differential Expression of WOX Genes Mediates Apical-Basal Axis Formation in the Arabidopsis Embryo
- (2008) Holger Breuninger et al. DEVELOPMENTAL CELL
- The Making of a Compound Inflorescence in Tomato and Related Nightshades
- (2008) Zachary B Lippman et al. PLOS BIOLOGY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search