Advanced In Vivo Cross-Linking Mass Spectrometry Platform to Characterize Proteome-Wide Protein Interactions

Optimization of a Top-Down Proteomics Platform for Closely Related Pathogenic Bacterial Discrimination

(2020) Mathieu Dupré et al.   JOURNAL OF PROTEOME RESEARCH

The First Community-Wide, Comparative Cross-linking Mass Spectrometry Study

(2019) Claudio Iacobucci et al.   ANALYTICAL CHEMISTRY

Distinct Roles of Outer Membrane Porins in Antibiotic Resistance and Membrane Integrity in Escherichia coli

(2019) Umji Choi et al.   Frontiers in Microbiology

In Situ Structural Restraints from Cross-Linking Mass Spectrometry in Human Mitochondria

(2019) Petra S. J. Ryl et al.   JOURNAL OF PROTEOME RESEARCH

Identification of MS-Cleavable and Noncleavable Chemically Cross-Linked Peptides with MetaMorpheus

(2018) Lei Lu et al.   JOURNAL OF PROTEOME RESEARCH

The transcription-repair coupling factor Mfd associates with RNA polymerase in the absence of exogenous damage

(2018) Han N. Ho et al.   Nature Communications

eXL-MS: An Enhanced Cross-Linking Mass Spectrometry Workflow To Study Protein Complexes

(2018) Martial Rey et al.   ANALYTICAL CHEMISTRY

In-Culture Cross-Linking of Bacterial Cells Reveals Large-Scale Dynamic Protein–Protein Interactions at the Peptide Level

(2017) Luitzen de Jong et al.   JOURNAL OF PROTEOME RESEARCH

Enrichment of Cross-Linked Peptides Using Charge-Based Fractional Diagonal Chromatography (ChaFRADIC)

(2017) Verena Tinnefeld et al.   JOURNAL OF PROTEOME RESEARCH

Performance Evaluation of the Q Exactive HF-X for Shotgun Proteomics

(2017) Christian D. Kelstrup et al.   JOURNAL OF PROTEOME RESEARCH

Development of Large-scale Cross-linking Mass Spectrometry

(2017) Helena Maria Barysz et al.   MOLECULAR & CELLULAR PROTEOMICS

Optimized fragmentation schemes and data analysis strategies for proteome-wide cross-link identification

(2017) Fan Liu et al.   Nature Communications

Divide and conquer: cleavable cross-linkers to study protein conformation and protein–protein interactions

(2016) Andrea Sinz   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Dissection of the function of the RmpM periplasmic protein from Neisseria meningitidis

(2016) Sunil Maharjan et al.   MICROBIOLOGY-SGM

High Sensitivity Crosslink Detection Coupled With Integrative Structure Modeling in the Mass Spec Studio

(2016) Vladimir Sarpe et al.   MOLECULAR & CELLULAR PROTEOMICS

A Novel Bio-Orthogonal Cross-Linker for Improved Protein/Protein Interaction Analysis

(2015) Catherine Nury et al.   ANALYTICAL CHEMISTRY

Proteome-wide profiling of protein assemblies by cross-linking mass spectrometry

(2015) Fan Liu et al.   NATURE METHODS

A Newin VivoCross-linking Mass Spectrometry Platform to Define Protein–Protein Interactions in Living Cells

(2014) Robyn M. Kaake et al.   MOLECULAR & CELLULAR PROTEOMICS

Chemical cross-linking/mass spectrometry targeting acidic residues in proteins and protein complexes

(2014) Alexander Leitner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quantitative cross-linking/mass spectrometry using isotope-labelled cross-linkers

(2013) Lutz Fischer et al.   Journal of Proteomics

Role of transition metal exporters in virulence: the example of Neisseria meningitidis

(2013) Cyril Guilhen et al.   Frontiers in Cellular and Infection Microbiology

Designer Reagents for Mass Spectrometry-Based Proteomics: Clickable Cross-Linkers for Elucidation of Protein Structures and Interactions

(2012) Chang Ho Sohn et al.   ANALYTICAL CHEMISTRY

Structure and function of the PorB porin from disseminatingNeisseria gonorrhoeae

(2012) Kornelius Zeth et al.   BIOCHEMICAL JOURNAL

Expanding the Chemical Cross-Linking Toolbox by the Use of Multiple Proteases and Enrichment by Size Exclusion Chromatography

(2012) Alexander Leitner et al.   MOLECULAR & CELLULAR PROTEOMICS

Identification of cross-linked peptides from complex samples

(2012) Bing Yang et al.   NATURE METHODS

CrossWork: Software-assisted identification of cross-linked peptides

(2011) Morten I. Rasmussen et al.   Journal of Proteomics

StavroX—A Software for Analyzing Crosslinked Products in Protein Interaction Studies

(2011) Michael Götze et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Cleavable Cross-Linker for Protein Structure Analysis: Reliable Identification of Cross-Linking Products by Tandem MS

(2010) Mathias Q. Müller et al.   ANALYTICAL CHEMISTRY

Novel Amidinating Cross-Linker for Facilitating Analyses of Protein Structures and Interactions

(2010) Matthew A. Lauber et al.   ANALYTICAL CHEMISTRY

ICC-CLASS: isotopically-coded cleavable crosslinking analysis software suite

(2010) Evgeniy V Petrotchenko et al.   BMC BIOINFORMATICS

Architecture of the RNA polymerase II–TFIIF complex revealed by cross-linking and mass spectrometry

(2010) Zhuo Angel Chen et al.   EMBO JOURNAL

ThefbpABCOperon Is Required for Ton-Independent Utilization of Xenosiderophores byNeisseria gonorrhoeaeStrain FA19

(2010) Heather R. Strange et al.   INFECTION AND IMMUNITY

Development of a Novel Cross-linking Strategy for Fast and Accurate Identification of Cross-linked Peptides of Protein Complexes

(2010) Athit Kao et al.   MOLECULAR & CELLULAR PROTEOMICS

An Isotopically Coded CID-cleavable Biotinylated Cross-linker for Structural Proteomics

(2010) Evgeniy V. Petrotchenko et al.   MOLECULAR & CELLULAR PROTEOMICS

A new cross-linking strategy: protein interaction reporter (PIR) technology for protein–protein interaction studies

(2010) Xiaoting Tang et al.   Molecular BioSystems

Identification of Cross-Linked Peptides after Click-Based Enrichment Using Sequential Collision-Induced Dissociation and Electron Transfer Dissociation Tandem Mass Spectrometry

(2009) Saiful M. Chowdhury et al.   ANALYTICAL CHEMISTRY

Identification of cross-linked peptides from large sequence databases

(2008) Oliver Rinner et al.   NATURE METHODS