Divide and conquer: cleavable cross-linkers to study protein conformation and protein–protein interactions

Integrated Workflow for Structural Proteomics Studies Based on Cross-Linking/Mass Spectrometry with an MS/MS Cleavable Cross-Linker

(2016) Christian Arlt et al.   ANALYTICAL CHEMISTRY

Developing an Acidic Residue Reactive and Sulfoxide-Containing MS-Cleavable Homobifunctional Cross-Linker for Probing Protein–Protein Interactions

(2016) Craig B. Gutierrez et al.   ANALYTICAL CHEMISTRY

Advances in protein complex analysis by chemical cross-linking coupled with mass spectrometry (CXMS) and bioinformatics

(2016) Bao Quoc Tran et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Dissociation Behavior of a TEMPO-Active Ester Cross-Linker for Peptide Structure Analysis by Free Radical Initiated Peptide Sequencing (FRIPS) in Negative ESI-MS

(2016) Christoph Hage et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Crosslinking and Mass Spectrometry: An Integrated Technology to Understand the Structure and Function of Molecular Machines

(2016) Alexander Leitner et al.   TRENDS IN BIOCHEMICAL SCIENCES

Trifunctional cross-linker for mapping protein-protein interaction networks and comparing protein conformational states

(2016) Dan Tan et al.   eLife

Interrogating the architecture of protein assemblies and protein interaction networks by cross-linking mass spectrometry

(2015) Fan Liu et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

XL-MS: Protein cross-linking coupled with mass spectrometry

(2015) Andrew N. Holding   METHODS

Proteome-wide profiling of protein assemblies by cross-linking mass spectrometry

(2015) Fan Liu et al.   NATURE METHODS

The advancement of chemical cross-linking and mass spectrometry for structural proteomics: from single proteins to protein interaction networks

(2014) Andrea Sinz   Expert Review of Proteomics

Isolation of cross-linked peptides by diagonal strong cation exchange chromatography for protein complex topology studies by peptide fragment fingerprinting from large sequence databases

(2014) Hansuk Buncherd et al.   JOURNAL OF CHROMATOGRAPHY A

Mapping Cell Envelope and Periplasm Protein Interactions of Escherichia coli Respiratory Formate Dehydrogenases by Chemical Cross-Linking and Mass Spectrometry

(2014) Michael Zorn et al.   JOURNAL OF PROTEOME RESEARCH

Fast Photochemical Oxidation of Proteins (FPOP) Maps the Epitope of EGFR Binding to Adnectin

(2014) Yuetian Yan et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Automated Assignment of MS/MS Cleavable Cross-Links in Protein 3D-Structure Analysis

(2014) Michael Götze et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

A Newin VivoCross-linking Mass Spectrometry Platform to Define Protein–Protein Interactions in Living Cells

(2014) Robyn M. Kaake et al.   MOLECULAR & CELLULAR PROTEOMICS

Structural Model of a CRISPR RNA-Silencing Complex Reveals the RNA-Target Cleavage Activity in Cmr4

(2014) Christian Benda et al.   MOLECULAR CELL

In Vivo Protein Interaction Network Identified with a Novel Real-Time Cross-Linked Peptide Identification Strategy

(2013) Chad R. Weisbrod et al.   JOURNAL OF PROTEOME RESEARCH

Cross-Link Guided Molecular Modeling with ROSETTA

(2013) Abdullah Kahraman et al.   PLoS One

Exploring membrane protein structural features by oxidative labeling and mass spectrometry

(2012) Lars Konermann et al.   Expert Review of Proteomics

Mapping the Structural Topology of the Yeast 19S Proteasomal Regulatory Particle Using Chemical Cross-linking and Probabilistic Modeling

(2012) Athit Kao et al.   MOLECULAR & CELLULAR PROTEOMICS

In vivo protein complex topologies: Sights through a cross-linking lens

(2012) James E. Bruce   PROTEOMICS

Chemical cross-linkers for protein structure studies by mass spectrometry

(2012) David Paramelle et al.   PROTEOMICS

Cleavable Cross-Linker for Protein Structure Analysis: Reliable Identification of Cross-Linking Products by Tandem MS

(2010) Mathias Q. Müller et al.   ANALYTICAL CHEMISTRY

Preferential Cleavage of N−N Hydrazone Bonds for Sequencing Bis-arylhydrazone Conjugated Peptides by Electron Transfer Dissociation

(2010) Myles W. Gardner et al.   ANALYTICAL CHEMISTRY

Fragmentation behavior of a thiourea-based reagent for protein structure analysis by collision-induced dissociative chemical cross-linking

(2010) Mathias Q. Müller et al.   JOURNAL OF MASS SPECTROMETRY

The beginning of a beautiful friendship: Cross-linking/mass spectrometry and modelling of proteins and multi-protein complexes

(2010) Juri Rappsilber   JOURNAL OF STRUCTURAL BIOLOGY

Crosslinking combined with mass spectrometry for structural proteomics

(2010) Evgeniy V. Petrotchenko et al.   MASS SPECTROMETRY REVIEWS

Probing Native Protein Structures by Chemical Cross-linking, Mass Spectrometry, and Bioinformatics

(2010) Alexander Leitner et al.   MOLECULAR & CELLULAR PROTEOMICS

An Isotopically Coded CID-cleavable Biotinylated Cross-linker for Structural Proteomics

(2010) Evgeniy V. Petrotchenko et al.   MOLECULAR & CELLULAR PROTEOMICS

Computational modeling of laminin N-terminal domains using sparse distance constraints from disulfide bonds and chemical cross-linking

(2010) Stefan Kalkhof et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Collision-induced dissociative chemical cross-linking reagent for protein structure characterization: applied Edman chemistry in the gas phase

(2009) Frank Dreiocker et al.   JOURNAL OF MASS SPECTROMETRY

Ionic Reagent for Controlling the Gas-Phase Fragmentation Reactions of Cross-Linked Peptides

(2008) Yali Lu et al.   ANALYTICAL CHEMISTRY

Chromogenic Cross-Linker for the Characterization of Protein Structure by Infrared Multiphoton Dissociation Mass Spectrometry

(2008) Myles W. Gardner et al.   ANALYTICAL CHEMISTRY

Identification of Protein-Protein Interactions and Topologies in Living Cells with Chemical Cross-linking and Mass Spectrometry

(2008) Haizhen Zhang et al.   MOLECULAR & CELLULAR PROTEOMICS

Native mass spectrometry: a bridge between interactomics and structural biology

(2008) Albert J R Heck   NATURE METHODS