Single and combined abiotic stressors affect maize rhizosphere bacterial microbiota

Drought Drives Spatial Variation in the Millet Root Microbiome

(2020) Tuesday Simmons et al.   Frontiers in Plant Science

Toward Comprehensive Plant Microbiome Research

(2020) Kari Saikkonen et al.   Frontiers in Ecology and Evolution

Plant growth promotion driven by a novel Caulobacter strain

(2019) Dexian Luo et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Metabarcoding: A powerful tool to investigate microbial communities and shape future plant protection strategies

(2018) Ahmed Abdelfattah et al.   BIOLOGICAL CONTROL

Drought delays development of the sorghum root microbiome and enriches for monoderm bacteria

(2018) Ling Xu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Assembly and ecological function of the root microbiome across angiosperm plant species

(2018) Connor R. Fitzpatrick et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Compositional shifts in root-associated bacterial and archaeal microbiota track the plant life cycle in field-grown rice

(2018) Joseph A. Edwards et al.   PLOS BIOLOGY

Drought Stress and Root-Associated Bacterial Communities

(2018) Dan Naylor et al.   Frontiers in Plant Science

Abiotic Stresses Shift Belowground Populus-Associated Bacteria Toward a Core Stress Microbiome

(2018) Collin M. Timm et al.   mSystems

Isolation and Analysis of Microbial Communities in Soil, Rhizosphere, and Roots in Perennial Grass Experiments

(2018) Morgan R. McPherson et al.   Jove-Journal of Visualized Experiments

Plant growth-promoting endophyte Sphingomonas sp. LK11 alleviates salinity stress in Solanum pimpinellifolium

(2017) Abdul Latif Khan et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Will drought events become more frequent and severe in Europe?

(2017) Jonathan Spinoni et al.   INTERNATIONAL JOURNAL OF CLIMATOLOGY

Drought and host selection influence bacterial community dynamics in the grass root microbiome

(2017) Dan Naylor et al.   ISME Journal

Drought Stress Results in a Compartment-Specific Restructuring of the Rice Root-Associated Microbiomes

(2017) Christian Santos-Medellín et al.   mBio

Impact of Combined Abiotic and Biotic Stresses on Plant Growth and Avenues for Crop Improvement by Exploiting Physio-morphological Traits

(2017) Prachi Pandey et al.   Frontiers in Plant Science

Nitrogen fertilizer rate affects root exudation, the rhizosphere microbiome and nitrogen-use-efficiency of maize

(2016) Shusheng Zhu et al.   APPLIED SOIL ECOLOGY

Climate and edaphic controllers influence rhizosphere community assembly for a wild annual grass

(2016) Erin E. Nuccio et al.   ECOLOGY

Impact of soil heat on reassembly of bacterial communities in the rhizosphere microbiome and plant disease suppression

(2016) Menno van der Voort et al.   ECOLOGY LETTERS

Plant root-microbe communication in shaping root microbiomes

(2016) Andrew Lareen et al.   PLANT MOLECULAR BIOLOGY

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Microbiome and Exudates of the Root and Rhizosphere of Brachypodium distachyon, a Model for Wheat

(2016) Akitomo Kawasaki et al.   PLoS One

Minor revision to V4 region SSU rRNA 806R gene primer greatly increases detection of SAR11 bacterioplankton

(2015) A Apprill et al.   AQUATIC MICROBIAL ECOLOGY

Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples

(2015) Alma E. Parada et al.   ENVIRONMENTAL MICROBIOLOGY

Root Phenotyping For Drought Tolerance in Bean Landraces From Calabria (Italy)

(2015) M. R. Abenavoli et al.   JOURNAL OF AGRONOMY AND CROP SCIENCE

Transcriptomic and anatomical complexity of primary, seminal, and crown roots highlight root type-specific functional diversity in maize (Zea maysL.)

(2015) Huanhuan Tai et al.   JOURNAL OF EXPERIMENTAL BOTANY

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Rhizosphere bacteria and fungi associated with plant growth in soils of three replanted apple orchards

(2015) Ingrid H. Franke-Whittle et al.   PLANT AND SOIL

Morphological and physiological effects of trans-cinnamic acid and its hydroxylated derivatives on maize root types

(2015) Antonio Lupini et al.   PLANT GROWTH REGULATION

Oasis desert farming selects environment-specific date palm root endophytic communities and cultivable bacteria that promote resistance to drought

(2015) Hanene Cherif et al.   Environmental Microbiology Reports

Bacterial endophyte Sphingomonas sp. LK11 produces gibberellins and IAA and promotes tomato plant growth

(2014) Abdul Latif Khan et al.   JOURNAL OF MICROBIOLOGY

Micromonospora from nitrogen fixing nodules of alfalfa (Medicago sativa L.). A new promising Plant Probiotic Bacteria.

(2014) Pilar Martínez-Hidalgo et al.   Scientific Reports

PEAR: a fast and accurate Illumina Paired-End reAd mergeR

(2013) J. Zhang et al.   BIOINFORMATICS

Legume growth-promoting rhizobia: An overview on the Mesorhizobium genus

(2013) Marta Laranjo et al.   MICROBIOLOGICAL RESEARCH

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Morpho-physiological responses of sugar beet (Beta vulgaris L.) genotypes to drought stress

(2012) Alessandro Romano et al.   ACTA PHYSIOLOGIAE PLANTARUM

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Ecology of Root Colonizing Massilia (Oxalobacteraceae)

(2012) Maya Ofek et al.   PLoS One

Correlations between Root-Associated Microorganisms and Peach Replant Disease Symptoms in a California Soil

(2012) Jiue-in Yang et al.   PLoS One

A Drought Resistance-Promoting Microbiome Is Selected by Root System under Desert Farming

(2012) Ramona Marasco et al.   PLoS One

The rhizosphere microbiome and plant health

(2012) Roeland L. Berendsen et al.   TRENDS IN PLANT SCIENCE

Common Features of Environmental and Potentially Beneficial Plant-Associated Burkholderia

(2011) Zulma Rocío Suárez-Moreno et al.   MICROBIAL ECOLOGY

Nitrate uptake along the maize primary root: an integrated physiological and molecular approach

(2011) AGOSTINO SORGONÀ et al.   PLANT CELL AND ENVIRONMENT

Spatial and temporal patterns of net nitrate uptake regulation and kinetics along the tap root of Citrus aurantium

(2010) Agostino Sorgonà et al.   ACTA PHYSIOLOGIAE PLANTARUM

Are root exudates more important than other sources of rhizodeposits in structuring rhizosphere bacterial communities?

(2010) Paul G. Dennis et al.   FEMS MICROBIOLOGY ECOLOGY

Plant-Growth-Promoting Rhizobacteria

(2009) Ben Lugtenberg et al.   Annual Review of Microbiology

Plant root growth, architecture and function

(2009) Angela Hodge et al.   PLANT AND SOIL

Resistance, resilience, and redundancy in microbial communities

(2008) S. D. Allison et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA