Model selection and assessment for multi-species occupancy models

A guide to Bayesian model selection for ecologists

(2015) M. B. Hooten et al.   ECOLOGICAL MONOGRAPHS

Fragmentation and dewatering transform Great Plains stream fish communities

(2015) Joshuah S. Perkin et al.   ECOLOGICAL MONOGRAPHS

Using multispecies occupancy models to improve the characterization and understanding of metacommunity structure

(2015) Joseph R. Mihaljevic et al.   ECOLOGY

Model averaging and muddled multimodel inferences

(2015) Brian S. Cade   ECOLOGY

Spatiotemporal hierarchical modelling of species richness and occupancy using camera trap data

(2015) Mathias W. Tobler et al.   JOURNAL OF APPLIED ECOLOGY

Truth, models, model sets, AIC, and multimodel inference: A Bayesian perspective

(2015) Richard J. Barker et al.   JOURNAL OF WILDLIFE MANAGEMENT

On the existence of maximum likelihood estimates for presence-only data

(2015) Trevor J. Hefley et al.   Methods in Ecology and Evolution

Penalized likelihood methods improve parameter estimates in occupancy models

(2015) Rebecca A. Hutchinson et al.   Methods in Ecology and Evolution

unmarked: AnRPackage for Fitting Hierarchical Models of Wildlife Occurrence and Abundance

(2015) Ian Fiske et al.   Journal of Statistical Software

Use of Multispecies Occupancy Models to Evaluate the Response of Bird Communities to Forest Degradation Associated with Logging

(2014) EDUARDO CARRILLO-RUBIO et al.   CONSERVATION BIOLOGY

Avian community composition associated with interactions between local and landscape habitat attributes

(2014) Andrew J. Kroll et al.   FOREST ECOLOGY AND MANAGEMENT

A Hierarchical Community Occurrence Model for North Carolina Stream Fish

(2014) Stephen R. Midway et al.   TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY

A Multi-Scaled Approach to Evaluating the Fish Assemblage Structure Within Southern Appalachian Streams

(2014) Joseph E. Kirsch et al.   TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY

Accounting for imperfect detection in Hill numbers for biodiversity studies

(2014) Kristin M. Broms et al.   Methods in Ecology and Evolution

A Strategy for Monitoring and Managing Declines in an Amphibian Community

(2013) EVAN H. CAMPBELL GRANT et al.   CONSERVATION BIOLOGY

Rarefaction and extrapolation with Hill numbers: a framework for sampling and estimation in species diversity studies

(2013) Anne Chao et al.   ECOLOGICAL MONOGRAPHS

A cautionary note on the discrete uniform prior for the binomialN

(2013) William A. Link   ECOLOGY

Stand structure and breeding birds: Implications for restoring ponderosa pine forests

(2013) Elizabeth L. Kalies et al.   JOURNAL OF WILDLIFE MANAGEMENT

Effects of Management Intervention on Post-Disturbance Community Composition: An Experimental Analysis Using Bayesian Hierarchical Models

(2013) Jack Giovanini et al.   PLoS One

Explaining Local-Scale Species Distributions: Relative Contributions of Spatial Autocorrelation and Landscape Heterogeneity for an Avian Assemblage

(2013) Brady J. Mattsson et al.   PLoS One

A comprehensive change detection method for updating the National Land Cover Database to circa 2011

(2013) Suming Jin et al.   REMOTE SENSING OF ENVIRONMENT

Understanding predictive information criteria for Bayesian models

(2013) Andrew Gelman et al.   STATISTICS AND COMPUTING

Detecting diversity: emerging methods to estimate species diversity

(2013) Kelly J. Iknayan et al.   TRENDS IN ECOLOGY & EVOLUTION

Biodiversity of man-made open habitats in an underused country: a class of multispecies abundance models for count data

(2012) Yuichi Yamaura et al.   BIODIVERSITY AND CONSERVATION

Efficient Species-Level Monitoring at the Landscape Scale

(2012) BARRY R. NOON et al.   CONSERVATION BIOLOGY

Evaluating the predictive abilities of community occupancy models using AUC while accounting for imperfect detection

(2012) Elise F. Zipkin et al.   ECOLOGICAL APPLICATIONS

Cryptic loss of montane avian richness and high community turnover over 100 years

(2012) Morgan W. Tingley et al.   ECOLOGY

Hierarchical Multi-Species Modeling of Carnivore Responses to Hunting, Habitat and Prey in a West African Protected Area

(2012) A. Cole Burton et al.   PLoS One

On thinning of chains in MCMC

(2011) William A. Link et al.   Methods in Ecology and Evolution

Improved estimation of site occupancy using penalized likelihood

(2010) Monica Moreno et al.   ECOLOGY

Models for inference in dynamic metacommunity systems

(2010) Robert M. Dorazio et al.   ECOLOGY

Occupancy dynamics in a tropical bird community: unexpectedly high forest use by birds classified as non-forest species

(2010) Viviana Ruiz-Gutiérrez et al.   JOURNAL OF APPLIED ECOLOGY

Modelling community dynamics based on species-level abundance models from detection/nondetection data

(2010) Yuichi Yamaura et al.   JOURNAL OF APPLIED ECOLOGY

Estimating Sampling Effort Required for Characterizing Species Richness and Site-to-Site Similarity in Fish Assemblage Surveys of Wadeable Illinois Streams

(2010) Ann M. Holtrop et al.   TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY

A weakly informative default prior distribution for logistic and other regression models

(2009) Andrew Gelman et al.   Annals of Applied Statistics

Multi-species occurrence models to evaluate the effects of conservation and management actions

(2009) Elise F. Zipkin et al.   BIOLOGICAL CONSERVATION

Do they? How do they? WHY do they differ? On finding reasons for differing performances of species distribution models

(2009) Jane Elith et al.   ECOGRAPHY

Modeling the effects of environmental disturbance on wildlife communities: avian responses to prescribed fire

(2009) Robin E. Russell et al.   ECOLOGICAL APPLICATIONS

Species richness and occupancy estimation in communities subject to temporary emigration

(2009) Marc Kéry et al.   ECOLOGY

Impacts of forest fragmentation on species richness: a hierarchical approach to community modelling

(2009) Elise F. Zipkin et al.   JOURNAL OF APPLIED ECOLOGY

Accounting for detectability in reef-fish biodiversity estimates

(2008) MA MacNeil et al.   MARINE ECOLOGY PROGRESS SERIES