Physiological and genetic convergence supports hypoxia resistance in high-altitude songbirds

NURR1 activation in skeletal muscle controls systemic energy homeostasis

(2019) Leonela Amoasii et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The role of hypoxia-inducible factor-2 alpha in angiogenesis

(2018) Christina Befani et al.   JOURNAL OF CELLULAR PHYSIOLOGY

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(2018) Vickie E. Baracos et al.   Nature Reviews Disease Primers

DNA methylation as a mediator of the association between prenatal adversity and risk factors for metabolic disease in adulthood

(2018) Elmar W. Tobi et al.   Science Advances

Skeletal muscle mitochondrial remodeling in exercise and diseases

(2018) Zhenji Gan et al.   CELL RESEARCH

Comparative genomic investigation of high-elevation adaptation in ectothermic snakes

(2018) Jia-Tang Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Species groups distributed across elevational gradients reveal convergent and continuous genetic adaptation to high elevations

(2018) Yan-Bo Sun et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolved changes in the intracellular distribution and physiology of muscle mitochondria in high-altitude native deer mice

(2017) Sajeni Mahalingam et al.   JOURNAL OF PHYSIOLOGY-LONDON

Stability-Mediated Epistasis Restricts Accessible Mutational Pathways in the Functional Evolution of Avian Hemoglobin

(2017) Amit Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Flying high: limits to flight performance by sparrows on the Qinghai-Tibet Plateau

(2016) Yan-Feng Sun et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Plasticity in mitochondrial cristae density allows metabolic capacity modulation in human skeletal muscle

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In Papyro Comparison of TMM (edgeR), RLE (DESeq2), and MRN Normalization Methods for a Simple Two-Conditions-Without-Replicates RNA-Seq Experimental Design

(2016) Elie Maza   Frontiers in Genetics

Genome-wide association study of growth traits in Jinghai Yellow chicken hens using SLAF-seq technology

(2015) W. H. Wang et al.   ANIMAL GENETICS

Adaptive Modifications of Muscle Phenotype in High-Altitude Deer Mice Are Associated with Evolved Changes in Gene Regulation

(2015) Graham R. Scott et al.   MOLECULAR BIOLOGY AND EVOLUTION

Contribution of a mutational hot spot to hemoglobin adaptation in high-altitude Andean house wrens

(2015) Spencer C. Galen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

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(2014) Thomas Ruf et al.   BIOLOGICAL REVIEWS

Receptor-mediated mitophagy in yeast and mammalian systems

(2014) Lei Liu et al.   CELL RESEARCH

Oxygen Sensing, Hypoxia-Inducible Factors, and Disease Pathophysiology

(2013) Gregg L. Semenza   Annual Review of Pathology-Mechanisms of Disease

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Cancer Cachexia: Mediators, Signaling, and Metabolic Pathways

(2012) Kenneth C.H. Fearon et al.   Cell Metabolism

Increase in Carbohydrate Utilization in High-Altitude Andean Mice

(2012) Marie-Pierre Schippers et al.   CURRENT BIOLOGY

Cancer cachexia: malignant inflammation, tumorkines, and metabolic mayhem

(2012) Maria Tsoli et al.   TRENDS IN ENDOCRINOLOGY AND METABOLISM

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(2011) P. Danecek et al.   BIOINFORMATICS

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Fast and accurate long-read alignment with Burrows–Wheeler transform

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The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Evolution of muscle phenotype for extreme high altitude flight in the bar-headed goose

(2009) G. R. Scott et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Facilitative Glucose Transporter Type 1 Is Differentially Regulated by Progesterone and Estrogen in Murine and Human Endometrial Stromal Cells

(2008) Antonina Frolova et al.   ENDOCRINOLOGY

Mitochondrial Autophagy Is an HIF-1-dependent Adaptive Metabolic Response to Hypoxia

(2008) Huafeng Zhang et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

MEF2C, a transcription factor that facilitates learning and memory by negative regulation of synapse numbers and function

(2008) A. C. Barbosa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA