Identity-by-descent detection across 487,409 British samples reveals fine scale population structure and ultra-rare variant associations

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Genome-wide rare variant analysis for thousands of phenotypes in over 70,000 exomes from two cohorts

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Dating genomic variants and shared ancestry in population-scale sequencing data

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A Fast and Simple Method for Detecting Identity-by-Descent Segments in Large-Scale Data

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Inferring whole-genome histories in large population datasets

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A method for genome-wide genealogy estimation for thousands of samples

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The “All of Us” Research Program

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Estimating the Genome-wide Mutation Rate with Three-Way Identity by Descent

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UK Biobank Whole-Exome Sequence Binary Phenome Analysis with Robust Region-Based Rare-Variant Test

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Genetic analysis of quantitative traits in the Japanese population links cell types to complex human diseases

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Comparison of phasing strategies for whole human genomes

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A One-Penny Imputed Genome from Next-Generation Reference Panels

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High-throughput inference of pairwise coalescence times identifies signals of selection and enriched disease heritability

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Leveraging Polygenic Functional Enrichment to Improve GWAS Power

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The NHGRI-EBI GWAS Catalog of published genome-wide association studies, targeted arrays and summary statistics 2019

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Identity inference of genomic data using long-range familial searches

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Double-slit photoelectron interference in strong-field ionization of the neon dimer

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ARGON: fast, whole-genome simulation of the discrete time Wright-fisher process

(2016) Pier Francesco Palamara   BIOINFORMATICS

The Allelic Landscape of Human Blood Cell Trait Variation and Links to Common Complex Disease

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Million Veteran Program: A mega-biobank to study genetic influences on health and disease

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Reference-based phasing using the Haplotype Reference Consortium panel

(2016) Po-Ru Loh et al.   NATURE GENETICS

Fast and accurate long-range phasing in a UK Biobank cohort

(2016) Po-Ru Loh et al.   NATURE GENETICS

A reference panel of 64,976 haplotypes for genotype imputation

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Robust and scalable inference of population history from hundreds of unphased whole genomes

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Leveraging Distant Relatedness to Quantify Human Mutation and Gene-Conversion Rates

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Accurate Non-parametric Estimation of Recent Effective Population Size from Segments of Identity by Descent

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(2015) Vivien Marx   NATURE

The fine-scale genetic structure of the British population

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Second-generation PLINK: rising to the challenge of larger and richer datasets

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(2014) R. Durbin   BIOINFORMATICS

diCal-IBD: demography-aware inference of identity-by-descent tracts in unrelated individuals

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Demography and the Age of Rare Variants

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Genome-Wide Inference of Ancestral Recombination Graphs

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Inference of historical migration rates via haplotype sharing

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Improving the Accuracy and Efficiency of Identity-by-Descent Detection in Population Data

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The Geography of Recent Genetic Ancestry across Europe

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Deleterious Alleles in the Human Genome Are on Average Younger Than Neutral Alleles of the Same Frequency

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Length Distributions of Identity by Descent Reveal Fine-Scale Demographic History

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Haploinsufficiency of a Spliceosomal GTPase Encoded by EFTUD2 Causes Mandibulofacial Dysostosis with Microcephaly

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Detecting Rare Variant Associations by Identity-by-Descent Mapping in Case-Control Studies

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An integrated map of genetic variation from 1,092 human genomes

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Differential confounding of rare and common variants in spatially structured populations

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DASH: A Method for Identical-by-Descent Haplotype Mapping Uncovers Association with Recent Variation

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The NumPy Array: A Structure for Efficient Numerical Computation

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Low-Pass Genome-Wide Sequencing and Variant Inference Using Identity-by-Descent in an Isolated Human Population

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The Architecture of Long-Range Haplotypes Shared within and across Populations

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Inference of human population history from individual whole-genome sequences

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New gene functions in megakaryopoiesis and platelet formation

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Recombination rates in admixed individuals identified by ancestry-based inference

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Robust relationship inference in genome-wide association studies

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Natural Selection and the Distribution of Identity-by-Descent in the Human Genome

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Common SNPs explain a large proportion of the heritability for human height

(2010) Jian Yang et al.   NATURE GENETICS

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Rare Variants Create Synthetic Genome-Wide Associations

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Calpain 8/nCL-2 and Calpain 9/nCL-4 Constitute an Active Protease Complex, G-Calpain, Involved in Gastric Mucosal Defense

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From evolutionary genetics to human immunology: how selection shapes host defence genes

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Whole population, genome-wide mapping of hidden relatedness

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Detection of sharing by descent, long-range phasing and haplotype imputation

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