Revisiting the phylogeny of the genus Lolliguncula Steenstrup 1881 improves understanding of their biogeography and proves the validity of Lolliguncula argus Brakoniecki & Roper, 1985

The grass squid Pickfordiateuthis pulchella is a paedomorphic loliginid

(2020) Frank E. Anderson et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

RASP 4: ancestral state reconstruction tool for multiple genes and characters

(2019) Yan Yu et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylogenomic incongruence, hypothesis testing, and taxonomic sampling: The monophyly of characiform fishes

(2018) Ricardo Betancur‐R. et al.   EVOLUTION

Biogeografia historica de los calamares de la familia Loliginidae (Teuthoidea: Myopsida)

(2017) Patricio M. Ulloa et al.   Latin American Journal of Aquatic Research

Divergence of cryptic species of Doryteuthis plei Blainville, 1823 (Loliginidae, Cephalopoda) in the Western Atlantic Ocean is associated with the formation of the Caribbean Sea

(2017) João Bráullio de L. Sales et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Occurrence of Octopus insularis Leite and Haimovici, 2008 in the Tropical Northwestern Atlantic and implications of species misidentification to octopus fisheries management

(2017) Françoise D. Lima et al.   Marine Biodiversity

Molecular Phylogeny and Biogeography of the Amphidromous Fish Genus Dormitator Gill 1861 (Teleostei: Eleotridae)

(2016) Sesángari Galván-Quesada et al.   PLoS One

New Eocene Coleoid (Cephalopoda) Diversity from Statolith Remains: Taxonomic Assignation, Fossil Record Analysis, and New Data for Calibrating Molecular Phylogenies

(2016) Pascal Neige et al.   PLoS One

Early Pliocene onset of modern Nordic Seas circulation related to ocean gateway changes

(2015) Stijn De Schepper et al.   Nature Communications

Molecular Phylogeny of the Genus Lolliguncula Steenstrup, 1881 Based on Nuclear and Mitochondrial DNA Sequences Indicates Genetic Isolation of Populations from North and South Atlantic, and the Possible Presence of Further Cryptic Species

(2014) João Bráullio L. Sales et al.   PLoS One

BEAST 2: A Software Platform for Bayesian Evolutionary Analysis

(2014) Remco Bouckaert et al.   PLoS Computational Biology

A general species delimitation method with applications to phylogenetic placements

(2013) Jiajie Zhang et al.   BIOINFORMATICS

Molecular evidence for co-occurring cryptic lineages within the Sepioteuthis cf. lessoniana species complex in the Indian and Indo-West Pacific Oceans

(2013) S. H. Cheng et al.   HYDROBIOLOGIA

New molecular phylogeny of the squids of the family Loliginidae with emphasis on the genus Doryteuthis Naef, 1912: Mitochondrial and nuclear sequences indicate the presence of cryptic species in the southern Atlantic Ocean

(2013) João Bráullio de Luna Sales et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Addressing Gene Tree Discordance and Non-Stationarity to Resolve a Multi-Locus Phylogeny of the Flatfishes (Teleostei: Pleuronectiformes)

(2013) Ricardo Betancur-R. et al.   SYSTEMATIC BIOLOGY

Delimiting Species Using Single-Locus Data and the Generalized Mixed Yule Coalescent Approach: A Revised Method and Evaluation on Simulated Data Sets

(2013) Tomochika Fujisawa et al.   SYSTEMATIC BIOLOGY

A geological perspective on sea-level rise and its impacts along the U.S. mid-Atlantic coast

(2013) Kenneth G. Miller et al.   Earths Future

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Directive 2010/63/EU on animal welfare: a review on the existing scientific knowledge and implications in cephalopod aquaculture research

(2012) António V. Sykes et al.   Reviews in Aquaculture

ABGD, Automatic Barcode Gap Discovery for primary species delimitation

(2011) N. PUILLANDRE et al.   MOLECULAR ECOLOGY

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

STEM: species tree estimation using maximum likelihood for gene trees under coalescence

(2009) Laura S. Kubatko et al.   BIOINFORMATICS

Accelerated Species Inventory on Madagascar Using Coalescent-Based Models of Species Delineation

(2009) Michael T. Monaghan et al.   SYSTEMATIC BIOLOGY

Estimating Species Phylogenies Using Coalescence Times among Sequences

(2009) Liang Liu et al.   SYSTEMATIC BIOLOGY